RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 RBBP6Q7Z6E9 1792 aaKnown RBP17.15■□□□□ 0.34
CCND1-204ENST00000539241 RLBP1P12271 317 aa17.14■□□□□ 0.33
CCND1-204ENST00000539241 GRK4P32298 578 aa17.14■□□□□ 0.33
CCND1-204ENST00000539241 PRKCZQ05513 592 aa17.14■□□□□ 0.33
CCND1-204ENST00000539241 MTFR1Q15390 333 aa17.14■□□□□ 0.33
CCND1-204ENST00000539241 SH3RF3Q8TEJ3 882 aaPredicted RBP17.14■□□□□ 0.33
CCND1-204ENST00000539241 AATFQ9NY61 560 aaKnown RBP eCLIP17.14■□□□□ 0.33
CCND1-204ENST00000539241 AGTPBP1Q9UPW5 1226 aa17.14■□□□□ 0.33
CCND1-204ENST00000539241 ZBTB7BO15156 539 aaPredicted RBP17.13■□□□□ 0.33
CCND1-204ENST00000539241 BAG3O95817 575 aa17.13■□□□□ 0.33
CCND1-204ENST00000539241 CYP2E1P05181 493 aaPredicted RBP17.13■□□□□ 0.33
CCND1-204ENST00000539241 PLCG2P16885 1265 aa17.13■□□□□ 0.33
CCND1-204ENST00000539241 SMCR8Q8TEV9 937 aaPredicted RBP17.13■□□□□ 0.33
CCND1-204ENST00000539241 NOP58Q9Y2X3 529 aaKnown RBP17.13■□□□□ 0.33
CCND1-204ENST00000539241 CAP2P40123 477 aa17.12■□□□□ 0.33
CCND1-204ENST00000539241 ZAP70P43403 619 aa17.12■□□□□ 0.33
CCND1-204ENST00000539241 PPP4CP60510 307 aa17.12■□□□□ 0.33
CCND1-204ENST00000539241 PROCA1Q8NCQ7 364 aaPredicted RBP17.12■□□□□ 0.33
CCND1-204ENST00000539241 ZNF512BQ96KM6 892 aaPredicted RBP17.12■□□□□ 0.33
CCND1-204ENST00000539241 TBC1D2Q9BYX2 928 aa17.12■□□□□ 0.33
CCND1-204ENST00000539241 PI4KBQ9UBF8 816 aa17.12■□□□□ 0.33
CCND1-204ENST00000539241 BIN2Q9UBW5 565 aaPredicted RBP17.12■□□□□ 0.33
CCND1-204ENST00000539241 HERC5Q9UII4 1024 aaKnown RBP17.12■□□□□ 0.33
CCND1-204ENST00000539241 GABRQQ9UN88 632 aa17.12■□□□□ 0.33
CCND1-204ENST00000539241 RRP1P56182 461 aaKnown RBP17.11■□□□□ 0.33
CCND1-204ENST00000539241 UBXN2AP68543 259 aa17.11■□□□□ 0.33
CCND1-204ENST00000539241 SPP2Q13103 211 aa17.11■□□□□ 0.33
CCND1-204ENST00000539241 RRP1BQ14684 758 aaKnown RBP17.11■□□□□ 0.33
CCND1-204ENST00000539241 TREML2Q5T2D2 321 aa17.11■□□□□ 0.33
CCND1-204ENST00000539241 ZNF280CQ8ND82 737 aa17.11■□□□□ 0.33
CCND1-204ENST00000539241 SLAIN1Q8ND83 568 aa17.11■□□□□ 0.33
CCND1-204ENST00000539241 TGFBRAP1Q8WUH2 860 aa17.11■□□□□ 0.33
CCND1-204ENST00000539241 CCDC8Q9H0W5 538 aaPredicted RBP17.11■□□□□ 0.33
CCND1-204ENST00000539241 DHX36Q9H2U1 1008 aaKnown RBP17.11■□□□□ 0.33
CCND1-204ENST00000539241 TLR7Q9NYK1 1049 aaKnown RBP17.11■□□□□ 0.33
CCND1-204ENST00000539241 DBNLQ9UJU6 430 aaKnown RBP17.11■□□□□ 0.33
CCND1-204ENST00000539241 PNMA3Q9UL41 463 aa17.11■□□□□ 0.33
CCND1-204ENST00000539241 DOCK1Q14185 1865 aa17.1■□□□□ 0.33
CCND1-204ENST00000539241 USP17L5A8MUK1 530 aa17.1■□□□□ 0.33
CCND1-204ENST00000539241 IGSF3O75054 1194 aa17.1■□□□□ 0.33
CCND1-204ENST00000539241 PDE3AQ14432 1141 aa17.1■□□□□ 0.33
CCND1-204ENST00000539241 ADGRA1Q86SQ6 560 aa17.1■□□□□ 0.33
CCND1-204ENST00000539241 MAPKAPK5Q8IW41 473 aa17.1■□□□□ 0.33
CCND1-204ENST00000539241 ANKRD13CQ8N6S4 541 aa17.1■□□□□ 0.33
CCND1-204ENST00000539241 SHISA4Q96DD7 197 aa17.1■□□□□ 0.33
CCND1-204ENST00000539241 PIH1D3Q9NQM4 214 aaKnown RBP17.1■□□□□ 0.33
CCND1-204ENST00000539241 FLT1P17948 1338 aa17.1■□□□□ 0.33
CCND1-204ENST00000539241 TNPO2O14787 897 aaKnown RBP17.09■□□□□ 0.33
CCND1-204ENST00000539241 CCL5P13501 91 aa17.09■□□□□ 0.33
CCND1-204ENST00000539241 FLT3LGP49771 235 aa17.09■□□□□ 0.33
CCND1-204ENST00000539241 HMGCS2P54868 508 aa17.09■□□□□ 0.33
CCND1-204ENST00000539241 HABP4Q5JVS0 413 aaKnown RBP17.09■□□□□ 0.33
CCND1-204ENST00000539241 CEP85Q6P2H3 762 aa17.09■□□□□ 0.33
CCND1-204ENST00000539241 NKX2-3Q8TAU0 364 aa17.09■□□□□ 0.33
CCND1-204ENST00000539241 PANK1Q8TE04 598 aa17.09■□□□□ 0.33
CCND1-204ENST00000539241 EAF2Q96CJ1 260 aaPredicted RBP17.09■□□□□ 0.33
CCND1-204ENST00000539241 RNF208Q9H0X6 261 aa17.09■□□□□ 0.33
CCND1-204ENST00000539241 AS3MTQ9HBK9 375 aa17.09■□□□□ 0.33
CCND1-204ENST00000539241 ADCY3O60266 1144 aa17.08■□□□□ 0.32
CCND1-204ENST00000539241 GJB1P08034 283 aa17.08■□□□□ 0.32
CCND1-204ENST00000539241 GJA8P48165 433 aa17.08■□□□□ 0.32
CCND1-204ENST00000539241 PABPC4Q13310 644 aaKnown RBP eCLIP17.08■□□□□ 0.32
CCND1-204ENST00000539241 FAM110CQ1W6H9 321 aa17.08■□□□□ 0.32
CCND1-204ENST00000539241 CYP7A1P22680 504 aa17.07■□□□□ 0.32
CCND1-204ENST00000539241 IRF5Q13568 498 aa17.07■□□□□ 0.32
CCND1-204ENST00000539241 SH3D19Q5HYK7 790 aa17.07■□□□□ 0.32
CCND1-204ENST00000539241 METTL16Q86W50 562 aaKnown RBP17.07■□□□□ 0.32
CCND1-204ENST00000539241 CRACR2BQ8N4Y2 399 aaPredicted RBP17.07■□□□□ 0.32
CCND1-204ENST00000539241 TRIM34Q9BYJ4 488 aa17.07■□□□□ 0.32
CCND1-204ENST00000539241 DNAJC18Q9H819 358 aa17.07■□□□□ 0.32
CCND1-204ENST00000539241 PALD1Q9ULE6 856 aa17.07■□□□□ 0.32
CCND1-204ENST00000539241 PHIPQ8WWQ0 1821 aa17.06■□□□□ 0.32
CCND1-204ENST00000539241 IDH1O75874 414 aaKnown RBP17.06■□□□□ 0.32
CCND1-204ENST00000539241 HLA-DOAP06340 250 aa17.06■□□□□ 0.32
CCND1-204ENST00000539241 ASNSP08243 561 aa17.06■□□□□ 0.32
CCND1-204ENST00000539241 ELNP15502 786 aa17.06■□□□□ 0.32
CCND1-204ENST00000539241 GCLCP48506 637 aaPredicted RBP17.06■□□□□ 0.32
CCND1-204ENST00000539241 DYNLL1P63167 89 aaKnown RBP17.06■□□□□ 0.32
CCND1-204ENST00000539241 ERC1Q8IUD2 1116 aa17.06■□□□□ 0.32
CCND1-204ENST00000539241 FOXP4Q8IVH2 680 aaPredicted RBP17.06■□□□□ 0.32
CCND1-204ENST00000539241 PXYLP1Q8TE99 480 aa17.06■□□□□ 0.32
CCND1-204ENST00000539241 COA7Q96BR5 231 aa17.06■□□□□ 0.32
CCND1-204ENST00000539241 WDR18Q9BV38 432 aa17.06■□□□□ 0.32
CCND1-204ENST00000539241 UNC93B1Q9H1C4 597 aa17.06■□□□□ 0.32
CCND1-204ENST00000539241 ASCC2Q9H1I8 757 aaPredicted RBP17.06■□□□□ 0.32
CCND1-204ENST00000539241 SAP30BPQ9UHR5 308 aaKnown RBP17.06■□□□□ 0.32
CCND1-204ENST00000539241 EXOC6BQ9Y2D4 811 aa17.06■□□□□ 0.32
CCND1-204ENST00000539241 GDF11O95390 407 aa17.05■□□□□ 0.32
CCND1-204ENST00000539241 INHAP05111 366 aa17.05■□□□□ 0.32
CCND1-204ENST00000539241 CENPBP07199 599 aaPredicted RBP17.05■□□□□ 0.32
CCND1-204ENST00000539241 MTMR2Q13614 643 aa17.05■□□□□ 0.32
CCND1-204ENST00000539241 AACSQ86V21 672 aa17.05■□□□□ 0.32
CCND1-204ENST00000539241 GINM1Q9NU53 330 aa17.05■□□□□ 0.32
CCND1-204ENST00000539241 TAOK2Q9UL54 1235 aa17.05■□□□□ 0.32
CCND1-204ENST00000539241 NDUFB9Q9Y6M9 179 aa17.05■□□□□ 0.32
CCND1-204ENST00000539241 PTPRFP10586 1907 aa17.05■□□□□ 0.32
CCND1-204ENST00000539241 MAST2Q6P0Q8 1798 aa17.05■□□□□ 0.32
CCND1-204ENST00000539241 BACE1P56817 501 aa17.04■□□□□ 0.32
CCND1-204ENST00000539241 JAG1P78504 1218 aa17.04■□□□□ 0.32
CCND1-204ENST00000539241 SHROOM1Q2M3G4 852 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms