RNA–Protein interactions for RNA: ENST00000539049.5

DDX11-213, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 3,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-213ENST00000539049 AKAP17AQ02040 695 aaKnown RBP12.39□□□□□ -0.43
DDX11-213ENST00000539049 MIS18BP1Q6P0N0 1132 aa12.39□□□□□ -0.43
DDX11-213ENST00000539049 TMTC2Q8N394 836 aa12.39□□□□□ -0.43
DDX11-213ENST00000539049 FAM81AQ8TBF8 368 aa12.39□□□□□ -0.43
DDX11-213ENST00000539049 RIPOR2Q9Y4F9 1068 aa12.39□□□□□ -0.43
DDX11-213ENST00000539049 SNX14Q9Y5W7 946 aa12.39□□□□□ -0.43
DDX11-213ENST00000539049 GRIN2DO15399 1336 aa12.39□□□□□ -0.43
DDX11-213ENST00000539049 PRAMEF22A3QJZ6 481 aa12.39□□□□□ -0.43
DDX11-213ENST00000539049 ESCO1Q5FWF5 840 aa12.39□□□□□ -0.43
DDX11-213ENST00000539049 CWF19L1Q69YN2 538 aaKnown RBP12.39□□□□□ -0.43
DDX11-213ENST00000539049 BZW1Q7L1Q6 419 aaKnown RBP12.39□□□□□ -0.43
DDX11-213ENST00000539049 ARHGAP22Q7Z5H3 698 aa12.39□□□□□ -0.43
DDX11-213ENST00000539049 YTHDF3Q7Z739 585 aaKnown RBP12.39□□□□□ -0.43
DDX11-213ENST00000539049 FAM228AQ86W67 206 aa12.39□□□□□ -0.43
DDX11-213ENST00000539049 NSMCE1Q8WV22 266 aa12.39□□□□□ -0.43
DDX11-213ENST00000539049 HOOK1Q9UJC3 728 aaKnown RBP12.39□□□□□ -0.43
DDX11-213ENST00000539049 TRPC6Q9Y210 931 aa12.39□□□□□ -0.43
DDX11-213ENST00000539049 CD151P48509 253 aa12.38□□□□□ -0.43
DDX11-213ENST00000539049 MYO1EQ12965 1108 aa12.38□□□□□ -0.43
DDX11-213ENST00000539049 TRIM58Q8NG06 486 aa12.38□□□□□ -0.43
DDX11-213ENST00000539049 GDAP1L1Q96MZ0 367 aa12.38□□□□□ -0.43
DDX11-213ENST00000539049 MMTAG2Q9BU76 263 aaKnown RBP12.38□□□□□ -0.43
DDX11-213ENST00000539049 PREX1Q8TCU6 1659 aa12.38□□□□□ -0.43
DDX11-213ENST00000539049 SPDYE3A6NKU9 549 aa12.38□□□□□ -0.43
DDX11-213ENST00000539049 CHL1O00533 1208 aa12.38□□□□□ -0.43
DDX11-213ENST00000539049 FMNL1O95466 1100 aaPredicted RBP12.38□□□□□ -0.43
DDX11-213ENST00000539049 ACCSLQ4AC99 568 aa12.38□□□□□ -0.43
DDX11-213ENST00000539049 LRRC23Q53EV4 343 aaPredicted RBP12.38□□□□□ -0.43
DDX11-213ENST00000539049 RASEFQ8IZ41 740 aa12.38□□□□□ -0.43
DDX11-213ENST00000539049 CCDC47Q96A33 483 aaKnown RBP12.38□□□□□ -0.43
DDX11-213ENST00000539049 TBC1D31Q96DN5 1066 aa12.38□□□□□ -0.43
DDX11-213ENST00000539049 TSPAN18Q96SJ8 248 aa12.38□□□□□ -0.43
DDX11-213ENST00000539049 DLG5Q8TDM6 1919 aa12.38□□□□□ -0.43
DDX11-213ENST00000539049 CPSF1Q10570 1443 aaKnown RBP12.38□□□□□ -0.43
DDX11-213ENST00000539049 TOP1P11387 765 aaKnown RBP12.38□□□□□ -0.43
DDX11-213ENST00000539049 CCT4P50991 539 aaKnown RBP12.38□□□□□ -0.43
DDX11-213ENST00000539049 CHST3Q7LGC8 479 aa12.38□□□□□ -0.43
DDX11-213ENST00000539049 TRIM42Q8IWZ5 723 aa12.38□□□□□ -0.43
DDX11-213ENST00000539049 FUKQ8N0W3 1084 aa12.38□□□□□ -0.43
DDX11-213ENST00000539049 CLASRPQ8N2M8 674 aaKnown RBP12.38□□□□□ -0.43
DDX11-213ENST00000539049 PAPOLBQ9NRJ5 636 aaKnown RBP12.38□□□□□ -0.43
DDX11-213ENST00000539049 ERICH2A1L162 156 aa12.37□□□□□ -0.43
DDX11-213ENST00000539049 LMOD1P29536 600 aaPredicted RBP12.37□□□□□ -0.43
DDX11-213ENST00000539049 FANCCQ00597 558 aa12.37□□□□□ -0.43
DDX11-213ENST00000539049 GNPTABQ3T906 1256 aa12.37□□□□□ -0.43
DDX11-213ENST00000539049 ZNF530Q6P9A1 599 aaPredicted RBP12.37□□□□□ -0.43
DDX11-213ENST00000539049 CCAR1Q8IX12 1150 aaKnown RBP12.37□□□□□ -0.43
DDX11-213ENST00000539049 TRIM4Q9C037 500 aa12.37□□□□□ -0.43
DDX11-213ENST00000539049 PCDHGC5Q9Y5F6 944 aa12.37□□□□□ -0.43
DDX11-213ENST00000539049 H3BQV1 296 aa12.37□□□□□ -0.43
DDX11-213ENST00000539049 CHGBP05060 677 aa12.37□□□□□ -0.43
DDX11-213ENST00000539049 ROR2Q01974 943 aaKnown RBP12.37□□□□□ -0.43
DDX11-213ENST00000539049 IFT88Q13099 833 aa12.37□□□□□ -0.43
DDX11-213ENST00000539049 CFAP100Q494V2 611 aa12.37□□□□□ -0.43
DDX11-213ENST00000539049 IFFO2Q5TF58 517 aa12.37□□□□□ -0.43
DDX11-213ENST00000539049 ALS2CR12Q96Q35 445 aa12.37□□□□□ -0.43
DDX11-213ENST00000539049 TSC22D3Q99576 134 aa12.37□□□□□ -0.43
DDX11-213ENST00000539049 AMOTL2Q9Y2J4 779 aa12.37□□□□□ -0.43
DDX11-213ENST00000539049 CCDC121Q6ZUS5 278 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 KIAA0825Q8IV33 1275 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 COG1Q8WTW3 980 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 SDF4Q9BRK5 362 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 HYPKQ9NX55 129 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 GNAT3A8MTJ3 354 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 ATP5J2-PTCD1G3V325 749 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 H7C1W4 665 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 PTCD1O75127 700 aaKnown RBP12.36□□□□□ -0.43
DDX11-213ENST00000539049 SMNDC1O75940 238 aaKnown RBP eCLIP12.36□□□□□ -0.43
DDX11-213ENST00000539049 SERPINC1P01008 464 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 IFFO1Q0D2I5 559 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 PDCLQ13371 301 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 RIC3Q7Z5B4 369 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 PDILTQ8N807 584 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 CCDC148Q8NFR7 591 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 RASSF8Q8NHQ8 419 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 ARHGEF1Q92888 912 aaKnown RBP12.36□□□□□ -0.43
DDX11-213ENST00000539049 EID1Q9Y6B2 187 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 GOLGA6BA6NDN3 693 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 KIF5CO60282 957 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 TOGARAM2Q6ZUX3 1019 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 BRAPQ7Z569 592 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 RHPN1Q8TCX5 695 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 BICD1Q96G01 975 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 DESI2Q9BSY9 194 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 CORO1CQ9ULV4 474 aaPredicted RBP12.36□□□□□ -0.43
DDX11-213ENST00000539049 CPS1P31327 1500 aa12.36□□□□□ -0.43
DDX11-213ENST00000539049 RBM47A0AV96 593 aaKnown RBP12.35□□□□□ -0.43
DDX11-213ENST00000539049 A6NNZ2 444 aa12.35□□□□□ -0.43
DDX11-213ENST00000539049 MYL1P05976 194 aa12.35□□□□□ -0.43
DDX11-213ENST00000539049 FERP16591 822 aa12.35□□□□□ -0.43
DDX11-213ENST00000539049 UBASH3AP57075 661 aa12.35□□□□□ -0.43
DDX11-213ENST00000539049 PIP4K2BP78356 416 aa12.35□□□□□ -0.43
DDX11-213ENST00000539049 TUBB2AQ13885 445 aa12.35□□□□□ -0.43
DDX11-213ENST00000539049 TUBB8Q3ZCM7 444 aa12.35□□□□□ -0.43
DDX11-213ENST00000539049 CNTROBQ8N137 903 aa12.35□□□□□ -0.43
DDX11-213ENST00000539049 TUBB2BQ9BVA1 445 aa12.35□□□□□ -0.43
DDX11-213ENST00000539049 ACTR5Q9H9F9 607 aaPredicted RBP12.35□□□□□ -0.43
DDX11-213ENST00000539049 LZTFL1Q9NQ48 299 aa12.35□□□□□ -0.43
DDX11-213ENST00000539049 PRR36Q9H6K5 1346 aa12.35□□□□□ -0.43
DDX11-213ENST00000539049 CBFA2T2O43439 604 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms