RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 PDS5AQ29RF7 1337 aaKnown RBP17.35■□□□□ 0.37
SMARCA4-206ENST00000538456 A0A0C4DFX4 3053 aa17.35■□□□□ 0.37
SMARCA4-206ENST00000538456 DDX60LQ5H9U9 1706 aaKnown RBP17.35■□□□□ 0.37
SMARCA4-206ENST00000538456 GPR75-ASB3A0A0A6YYF3 556 aa17.34■□□□□ 0.37
SMARCA4-206ENST00000538456 HMGCRP04035 888 aa17.34■□□□□ 0.37
SMARCA4-206ENST00000538456 TFCP2Q12800 502 aa17.34■□□□□ 0.37
SMARCA4-206ENST00000538456 ZNF280CQ8ND82 737 aa17.34■□□□□ 0.37
SMARCA4-206ENST00000538456 CDCA7LQ96GN5 454 aa17.34■□□□□ 0.37
SMARCA4-206ENST00000538456 MEIS3Q99687 375 aa17.34■□□□□ 0.37
SMARCA4-206ENST00000538456 NOB1Q9ULX3 412 aaKnown RBP17.34■□□□□ 0.37
SMARCA4-206ENST00000538456 PLXNB2O15031 1838 aa17.33■□□□□ 0.37
SMARCA4-206ENST00000538456 DLL1O00548 723 aa17.33■□□□□ 0.36
SMARCA4-206ENST00000538456 TBC1D12O60347 775 aa17.33■□□□□ 0.36
SMARCA4-206ENST00000538456 TRIM32Q13049 653 aa17.33■□□□□ 0.36
SMARCA4-206ENST00000538456 MVPQ14764 893 aaKnown RBP17.33■□□□□ 0.36
SMARCA4-206ENST00000538456 PI16Q6UXB8 463 aa17.33■□□□□ 0.36
SMARCA4-206ENST00000538456 OSBPL5Q9H0X9 879 aaPredicted RBP17.33■□□□□ 0.36
SMARCA4-206ENST00000538456 ZMYND8Q9ULU4 1186 aaPredicted RBP17.33■□□□□ 0.36
SMARCA4-206ENST00000538456 ZBTB22O15209 634 aa17.32■□□□□ 0.36
SMARCA4-206ENST00000538456 CAPN2P17655 700 aa17.32■□□□□ 0.36
SMARCA4-206ENST00000538456 GCLCP48506 637 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-206ENST00000538456 TBC1D9Q6ZT07 1266 aa17.32■□□□□ 0.36
SMARCA4-206ENST00000538456 NEUROD6Q96NK8 337 aa17.32■□□□□ 0.36
SMARCA4-206ENST00000538456 ASCC2Q9H1I8 757 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-206ENST00000538456 HDAC5Q9UQL6 1122 aa17.32■□□□□ 0.36
SMARCA4-206ENST00000538456 AKAP2Q9Y2D5 859 aa17.32■□□□□ 0.36
SMARCA4-206ENST00000538456 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-206ENST00000538456 SIPA1L1O43166 1804 aa17.31■□□□□ 0.36
SMARCA4-206ENST00000538456 ZNF316A6NFI3 1004 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-206ENST00000538456 SRGAP3O43295 1099 aa17.31■□□□□ 0.36
SMARCA4-206ENST00000538456 SYN1P17600 705 aa17.31■□□□□ 0.36
SMARCA4-206ENST00000538456 PABPC4Q13310 644 aaKnown RBP eCLIP17.31■□□□□ 0.36
SMARCA4-206ENST00000538456 RRP1BQ14684 758 aaKnown RBP17.31■□□□□ 0.36
SMARCA4-206ENST00000538456 RAI14Q9P0K7 980 aa17.31■□□□□ 0.36
SMARCA4-206ENST00000538456 HMG20BQ9P0W2 317 aa17.31■□□□□ 0.36
SMARCA4-206ENST00000538456 COL2A1P02458 1487 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-206ENST00000538456 USP17L5A8MUK1 530 aa17.3■□□□□ 0.36
SMARCA4-206ENST00000538456 CAP2P40123 477 aa17.3■□□□□ 0.36
SMARCA4-206ENST00000538456 GSTO1P78417 241 aa17.3■□□□□ 0.36
SMARCA4-206ENST00000538456 GORABQ5T7V8 394 aa17.3■□□□□ 0.36
SMARCA4-206ENST00000538456 TEX11Q8IYF3 940 aa17.3■□□□□ 0.36
SMARCA4-206ENST00000538456 ANKLE1Q8NAG6 615 aa17.3■□□□□ 0.36
SMARCA4-206ENST00000538456 SPATA5Q8NB90 893 aa17.3■□□□□ 0.36
SMARCA4-206ENST00000538456 NSUN4Q96CB9 384 aaKnown RBP17.3■□□□□ 0.36
SMARCA4-206ENST00000538456 API5Q9BZZ5 524 aaKnown RBP17.3■□□□□ 0.36
SMARCA4-206ENST00000538456 NBPF3Q9H094 633 aa17.3■□□□□ 0.36
SMARCA4-206ENST00000538456 HMX1Q9NP08 348 aaPredicted RBP17.3■□□□□ 0.36
SMARCA4-206ENST00000538456 GJD2Q9UKL4 321 aa17.3■□□□□ 0.36
SMARCA4-206ENST00000538456 CUL9Q8IWT3 2517 aa17.3■□□□□ 0.36
SMARCA4-206ENST00000538456 CDK5RAP2Q96SN8 1893 aa17.29■□□□□ 0.36
SMARCA4-206ENST00000538456 RPTORQ8N122 1335 aa17.29■□□□□ 0.36
SMARCA4-206ENST00000538456 PEX10O60683 326 aa17.29■□□□□ 0.36
SMARCA4-206ENST00000538456 NPM3O75607 178 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-206ENST00000538456 LDHCP07864 332 aa17.29■□□□□ 0.36
SMARCA4-206ENST00000538456 MTMR2Q13614 643 aa17.29■□□□□ 0.36
SMARCA4-206ENST00000538456 TRIB2Q92519 343 aa17.29■□□□□ 0.36
SMARCA4-206ENST00000538456 GDF15Q99988 308 aa17.29■□□□□ 0.36
SMARCA4-206ENST00000538456 CYP2B6P20813 491 aa17.28■□□□□ 0.36
SMARCA4-206ENST00000538456 IRX3P78415 501 aaPredicted RBP17.28■□□□□ 0.36
SMARCA4-206ENST00000538456 SH3RF3Q8TEJ3 882 aaPredicted RBP17.28■□□□□ 0.36
SMARCA4-206ENST00000538456 TBC1D2Q9BYX2 928 aa17.28■□□□□ 0.36
SMARCA4-206ENST00000538456 C11orf49Q9H6J7 331 aa17.28■□□□□ 0.36
SMARCA4-206ENST00000538456 AS3MTQ9HBK9 375 aa17.28■□□□□ 0.36
SMARCA4-206ENST00000538456 MAST2Q6P0Q8 1798 aa17.28■□□□□ 0.36
SMARCA4-206ENST00000538456 MNX1P50219 401 aaPredicted RBP17.27■□□□□ 0.36
SMARCA4-206ENST00000538456 Q7L0L9 218 aa17.27■□□□□ 0.36
SMARCA4-206ENST00000538456 LRP2BPQ9P2M1 347 aa17.27■□□□□ 0.36
SMARCA4-206ENST00000538456 MAP4K4O95819 1239 aaPredicted RBP17.26■□□□□ 0.35
SMARCA4-206ENST00000538456 PRKAR2AP13861 404 aaKnown RBP17.26■□□□□ 0.35
SMARCA4-206ENST00000538456 BMP8BP34820 402 aa17.26■□□□□ 0.35
SMARCA4-206ENST00000538456 MCAMP43121 646 aa17.26■□□□□ 0.35
SMARCA4-206ENST00000538456 MAGEA10P43363 369 aaPredicted RBP17.26■□□□□ 0.35
SMARCA4-206ENST00000538456 SH3D19Q5HYK7 790 aa17.26■□□□□ 0.35
SMARCA4-206ENST00000538456 DEFB123Q8N688 67 aa17.26■□□□□ 0.35
SMARCA4-206ENST00000538456 NOL10Q9BSC4 688 aaKnown RBP17.26■□□□□ 0.35
SMARCA4-206ENST00000538456 TXNRD2Q9NNW7 524 aa17.26■□□□□ 0.35
SMARCA4-206ENST00000538456 TMOD4Q9NZQ9 345 aa17.26■□□□□ 0.35
SMARCA4-206ENST00000538456 MORF4L1Q9UBU8 362 aa17.26■□□□□ 0.35
SMARCA4-206ENST00000538456 HERC5Q9UII4 1024 aaKnown RBP17.26■□□□□ 0.35
SMARCA4-206ENST00000538456 FOCADQ5VW36 1801 aa17.26■□□□□ 0.35
SMARCA4-206ENST00000538456 GNAI3P08754 354 aa17.25■□□□□ 0.35
SMARCA4-206ENST00000538456 ARID4AP29374 1257 aaPredicted RBP17.25■□□□□ 0.35
SMARCA4-206ENST00000538456 SHROOM1Q2M3G4 852 aaPredicted RBP17.25■□□□□ 0.35
SMARCA4-206ENST00000538456 P2RX7Q99572 595 aaKnown RBP17.25■□□□□ 0.35
SMARCA4-206ENST00000538456 AATFQ9NY61 560 aaKnown RBP eCLIP17.25■□□□□ 0.35
SMARCA4-206ENST00000538456 PI4KBQ9UBF8 816 aa17.25■□□□□ 0.35
SMARCA4-206ENST00000538456 OGDHLQ9ULD0 1010 aa17.25■□□□□ 0.35
SMARCA4-206ENST00000538456 MYO5AQ9Y4I1 1855 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-206ENST00000538456 PFASO15067 1338 aa17.24■□□□□ 0.35
SMARCA4-206ENST00000538456 ASNSP08243 561 aa17.24■□□□□ 0.35
SMARCA4-206ENST00000538456 BACE1P56817 501 aa17.24■□□□□ 0.35
SMARCA4-206ENST00000538456 HERVK_113P62684 666 aa17.24■□□□□ 0.35
SMARCA4-206ENST00000538456 JAG1P78504 1218 aa17.24■□□□□ 0.35
SMARCA4-206ENST00000538456 MTX1Q13505 466 aa17.24■□□□□ 0.35
SMARCA4-206ENST00000538456 MAPKAPK5Q8IW41 473 aa17.24■□□□□ 0.35
SMARCA4-206ENST00000538456 TRMT2AQ8IZ69 625 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-206ENST00000538456 GPRC5AQ8NFJ5 357 aa17.24■□□□□ 0.35
SMARCA4-206ENST00000538456 SOCS4Q8WXH5 440 aa17.24■□□□□ 0.35
SMARCA4-206ENST00000538456 NUDT12Q9BQG2 462 aa17.24■□□□□ 0.35
SMARCA4-206ENST00000538456 WDR18Q9BV38 432 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms