RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 ZNF280CQ8ND82 737 aa10.99□□□□□ -0.65
SMAD3-203ENST00000537194 SHISA4Q96DD7 197 aa10.99□□□□□ -0.65
SMAD3-203ENST00000537194 UNC93B1Q9H1C4 597 aa10.99□□□□□ -0.65
SMAD3-203ENST00000537194 TMOD4Q9NZQ9 345 aa10.99□□□□□ -0.65
SMAD3-203ENST00000537194 GABRQQ9UN88 632 aa10.99□□□□□ -0.65
SMAD3-203ENST00000537194 USP17L5A8MUK1 530 aa10.98□□□□□ -0.65
SMAD3-203ENST00000537194 ELNP15502 786 aa10.98□□□□□ -0.65
SMAD3-203ENST00000537194 RARSP54136 660 aaKnown RBP10.98□□□□□ -0.65
SMAD3-203ENST00000537194 IRX3P78415 501 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-203ENST00000537194 SPP2Q13103 211 aa10.98□□□□□ -0.65
SMAD3-203ENST00000537194 MTX1Q13505 466 aa10.98□□□□□ -0.65
SMAD3-203ENST00000537194 CCDC158Q5M9N0 1113 aa10.98□□□□□ -0.65
SMAD3-203ENST00000537194 ATF7IPQ6VMQ6 1270 aa10.98□□□□□ -0.65
SMAD3-203ENST00000537194 SH3BP5LQ7L8J4 393 aa10.98□□□□□ -0.65
SMAD3-203ENST00000537194 TRMT2AQ8IZ69 625 aaKnown RBP10.98□□□□□ -0.65
SMAD3-203ENST00000537194 CRACR2BQ8N4Y2 399 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-203ENST00000537194 DEFB118Q96PH6 123 aa10.98□□□□□ -0.65
SMAD3-203ENST00000537194 DHX36Q9H2U1 1008 aaKnown RBP10.98□□□□□ -0.65
SMAD3-203ENST00000537194 DDX4Q9NQI0 724 aaKnown RBP10.98□□□□□ -0.65
SMAD3-203ENST00000537194 PI4KBQ9UBF8 816 aa10.98□□□□□ -0.65
SMAD3-203ENST00000537194 HERC5Q9UII4 1024 aaKnown RBP10.98□□□□□ -0.65
SMAD3-203ENST00000537194 ATRNL1Q5VV63 1379 aa10.98□□□□□ -0.65
SMAD3-203ENST00000537194 BRCA2P51587 3418 aa10.97□□□□□ -0.65
SMAD3-203ENST00000537194 ASNSP08243 561 aa10.97□□□□□ -0.65
SMAD3-203ENST00000537194 CAP2P40123 477 aa10.97□□□□□ -0.65
SMAD3-203ENST00000537194 HMGCS2P54868 508 aa10.97□□□□□ -0.65
SMAD3-203ENST00000537194 TTC39AQ5SRH9 613 aa10.97□□□□□ -0.65
SMAD3-203ENST00000537194 NAA16Q6N069 864 aaPredicted RBP10.97□□□□□ -0.65
SMAD3-203ENST00000537194 NECAB2Q7Z6G3 386 aa10.97□□□□□ -0.65
SMAD3-203ENST00000537194 FRAT1Q92837 279 aaPredicted RBP10.97□□□□□ -0.65
SMAD3-203ENST00000537194 NSUN4Q96CB9 384 aaKnown RBP10.97□□□□□ -0.65
SMAD3-203ENST00000537194 CWC22Q9HCG8 908 aaKnown RBP10.97□□□□□ -0.65
SMAD3-203ENST00000537194 HMG20BQ9P0W2 317 aa10.97□□□□□ -0.65
SMAD3-203ENST00000537194 PHIPQ8WWQ0 1821 aa10.97□□□□□ -0.65
SMAD3-203ENST00000537194 ATAD5Q96QE3 1844 aa10.97□□□□□ -0.65
SMAD3-203ENST00000537194 RFX7Q2KHR2 1363 aa10.96□□□□□ -0.65
SMAD3-203ENST00000537194 A0A1W2PPC1 479 aa10.96□□□□□ -0.65
SMAD3-203ENST00000537194 IGSF3O75054 1194 aa10.96□□□□□ -0.65
SMAD3-203ENST00000537194 HMGCRP04035 888 aa10.96□□□□□ -0.65
SMAD3-203ENST00000537194 ARID4AP29374 1257 aaPredicted RBP10.96□□□□□ -0.65
SMAD3-203ENST00000537194 RHBDL3P58872 404 aa10.96□□□□□ -0.65
SMAD3-203ENST00000537194 PDE3AQ14432 1141 aa10.96□□□□□ -0.65
SMAD3-203ENST00000537194 HMX1Q9NP08 348 aaPredicted RBP10.96□□□□□ -0.65
SMAD3-203ENST00000537194 GINM1Q9NU53 330 aa10.96□□□□□ -0.65
SMAD3-203ENST00000537194 RBM27Q9P2N5 1060 aaKnown RBP10.96□□□□□ -0.65
SMAD3-203ENST00000537194 COL2A1P02458 1487 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-203ENST00000537194 C19orf81C9J6K1 198 aa10.95□□□□□ -0.66
SMAD3-203ENST00000537194 ZBTB7BO15156 539 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-203ENST00000537194 HLA-DOAP06340 250 aa10.95□□□□□ -0.66
SMAD3-203ENST00000537194 TREML2Q5T2D2 321 aa10.95□□□□□ -0.66
SMAD3-203ENST00000537194 TBC1D9Q6ZT07 1266 aa10.95□□□□□ -0.66
SMAD3-203ENST00000537194 UBE2Q1Q7Z7E8 422 aa10.95□□□□□ -0.66
SMAD3-203ENST00000537194 CERS3Q8IU89 383 aa10.95□□□□□ -0.66
SMAD3-203ENST00000537194 FOXP4Q8IVH2 680 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-203ENST00000537194 TRMT44Q8IYL2 757 aaKnown RBP10.95□□□□□ -0.66
SMAD3-203ENST00000537194 ANKLE1Q8NAG6 615 aa10.95□□□□□ -0.66
SMAD3-203ENST00000537194 GTF3C2Q8WUA4 911 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-203ENST00000537194 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMAD3-203ENST00000537194 RPTORQ8N122 1335 aa10.94□□□□□ -0.66
SMAD3-203ENST00000537194 FAM196BA6NMK8 535 aa10.94□□□□□ -0.66
SMAD3-203ENST00000537194 CCDC84Q86UT8 332 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-203ENST00000537194 SOCS4Q8WXH5 440 aa10.94□□□□□ -0.66
SMAD3-203ENST00000537194 NUDT12Q9BQG2 462 aa10.94□□□□□ -0.66
SMAD3-203ENST00000537194 ASCC2Q9H1I8 757 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-203ENST00000537194 PAK6Q9NQU5 681 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-203ENST00000537194 AATFQ9NY61 560 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMAD3-203ENST00000537194 USP17L10C9JJH3 530 aa10.93□□□□□ -0.66
SMAD3-203ENST00000537194 CCER2I3L3R5 266 aa10.93□□□□□ -0.66
SMAD3-203ENST00000537194 GLRX3O76003 335 aaKnown RBP10.93□□□□□ -0.66
SMAD3-203ENST00000537194 MCAMP43121 646 aa10.93□□□□□ -0.66
SMAD3-203ENST00000537194 BACE1P56817 501 aa10.93□□□□□ -0.66
SMAD3-203ENST00000537194 MTMR2Q13614 643 aa10.93□□□□□ -0.66
SMAD3-203ENST00000537194 SH3D19Q5HYK7 790 aa10.93□□□□□ -0.66
SMAD3-203ENST00000537194 ZKSCAN2Q63HK3 967 aa10.93□□□□□ -0.66
SMAD3-203ENST00000537194 PI16Q6UXB8 463 aa10.93□□□□□ -0.66
SMAD3-203ENST00000537194 FTSJ3Q8IY81 847 aaKnown RBP10.93□□□□□ -0.66
SMAD3-203ENST00000537194 GPRC5AQ8NFJ5 357 aa10.93□□□□□ -0.66
SMAD3-203ENST00000537194 SH3RF3Q8TEJ3 882 aaPredicted RBP10.93□□□□□ -0.66
SMAD3-203ENST00000537194 TGFBRAP1Q8WUH2 860 aa10.93□□□□□ -0.66
SMAD3-203ENST00000537194 PAWRQ96IZ0 340 aaKnown RBP10.93□□□□□ -0.66
SMAD3-203ENST00000537194 WDR18Q9BV38 432 aa10.93□□□□□ -0.66
SMAD3-203ENST00000537194 NBPF3Q9H094 633 aa10.93□□□□□ -0.66
SMAD3-203ENST00000537194 GPR108Q9NPR9 543 aa10.93□□□□□ -0.66
SMAD3-203ENST00000537194 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.93□□□□□ -0.66
SMAD3-203ENST00000537194 LOC285556D6RIA3 1793 aa10.93□□□□□ -0.66
SMAD3-203ENST00000537194 SURF6O75683 361 aaKnown RBP10.92□□□□□ -0.66
SMAD3-203ENST00000537194 TRIM27P14373 513 aa10.92□□□□□ -0.66
SMAD3-203ENST00000537194 MAPK4P31152 587 aa10.92□□□□□ -0.66
SMAD3-203ENST00000537194 PPP4CP60510 307 aa10.92□□□□□ -0.66
SMAD3-203ENST00000537194 CCNA1P78396 465 aa10.92□□□□□ -0.66
SMAD3-203ENST00000537194 MAPKAPK5Q8IW41 473 aa10.92□□□□□ -0.66
SMAD3-203ENST00000537194 CLUAP1Q96AJ1 413 aa10.92□□□□□ -0.66
SMAD3-203ENST00000537194 FEZ1Q99689 392 aa10.92□□□□□ -0.66
SMAD3-203ENST00000537194 CRISPLD2Q9H0B8 497 aa10.92□□□□□ -0.66
SMAD3-203ENST00000537194 SNRKQ9NRH2 765 aa10.92□□□□□ -0.66
SMAD3-203ENST00000537194 MORF4L1Q9UBU8 362 aa10.92□□□□□ -0.66
SMAD3-203ENST00000537194 PNMA6EA0A0J9YXQ4 647 aa10.91□□□□□ -0.66
SMAD3-203ENST00000537194 SLURP2P0DP57 97 aa10.91□□□□□ -0.66
SMAD3-203ENST00000537194 ZKSCAN1P17029 563 aaPredicted RBP10.91□□□□□ -0.66
SMAD3-203ENST00000537194 CYP2B6P20813 491 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms