RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 NID2Q14112 1375 aa20.6■□□□□ 0.89
RAB40C-203ENST00000535977 GOLGA8AA7E2F4 631 aa20.59■□□□□ 0.89
RAB40C-203ENST00000535977 MBD4O95243 580 aa20.59■□□□□ 0.89
RAB40C-203ENST00000535977 ADAMTS2O95450 1211 aa20.59■□□□□ 0.89
RAB40C-203ENST00000535977 ATP6V1AP38606 617 aa20.59■□□□□ 0.89
RAB40C-203ENST00000535977 RCAN1P53805 252 aa20.59■□□□□ 0.89
RAB40C-203ENST00000535977 DDB1Q16531 1140 aa20.59■□□□□ 0.89
RAB40C-203ENST00000535977 KRT40Q6A162 431 aa20.59■□□□□ 0.89
RAB40C-203ENST00000535977 SLC12A7Q9Y666 1083 aa20.59■□□□□ 0.89
RAB40C-203ENST00000535977 DOT1LQ8TEK3 1739 aa20.59■□□□□ 0.89
RAB40C-203ENST00000535977 COL16A1Q07092 1604 aaPredicted RBP20.59■□□□□ 0.89
RAB40C-203ENST00000535977 CAMTA2O94983 1202 aa20.59■□□□□ 0.89
RAB40C-203ENST00000535977 ZNF202O95125 648 aa20.59■□□□□ 0.89
RAB40C-203ENST00000535977 SLC3A2P08195 630 aaKnown RBP20.59■□□□□ 0.89
RAB40C-203ENST00000535977 GNL2Q13823 731 aaKnown RBP20.59■□□□□ 0.89
RAB40C-203ENST00000535977 AXDND1Q5T1B0 1012 aaPredicted RBP20.59■□□□□ 0.89
RAB40C-203ENST00000535977 ICE2Q659A1 982 aa20.59■□□□□ 0.89
RAB40C-203ENST00000535977 MFSD6Q6ZSS7 791 aa20.59■□□□□ 0.89
RAB40C-203ENST00000535977 CDC5LQ99459 802 aaKnown RBP20.59■□□□□ 0.89
RAB40C-203ENST00000535977 KIF28PB7ZC32 967 aa20.58■□□□□ 0.89
RAB40C-203ENST00000535977 MMP14P50281 582 aa20.58■□□□□ 0.89
RAB40C-203ENST00000535977 SSRP1Q08945 709 aaKnown RBP20.58■□□□□ 0.89
RAB40C-203ENST00000535977 NTRK3Q16288 839 aa20.58■□□□□ 0.89
RAB40C-203ENST00000535977 STAG1Q8WVM7 1258 aa20.58■□□□□ 0.89
RAB40C-203ENST00000535977 RNF41Q9H4P4 317 aaPredicted RBP20.58■□□□□ 0.89
RAB40C-203ENST00000535977 ZCCHC17Q9NP64 241 aaKnown RBP20.58■□□□□ 0.89
RAB40C-203ENST00000535977 MYO5AQ9Y4I1 1855 aaKnown RBP20.58■□□□□ 0.89
RAB40C-203ENST00000535977 NEDD4P46934 1319 aa20.58■□□□□ 0.89
RAB40C-203ENST00000535977 IFIT3O14879 490 aaKnown RBP20.58■□□□□ 0.88
RAB40C-203ENST00000535977 TMCO3Q6UWJ1 677 aa20.58■□□□□ 0.88
RAB40C-203ENST00000535977 VPS37DQ86XT2 251 aa20.58■□□□□ 0.88
RAB40C-203ENST00000535977 ZSWIM5Q9P217 1185 aa20.58■□□□□ 0.88
RAB40C-203ENST00000535977 ZNF652Q9Y2D9 606 aa20.58■□□□□ 0.88
RAB40C-203ENST00000535977 RREB1Q92766 1687 aa20.58■□□□□ 0.88
RAB40C-203ENST00000535977 LOC102724428A0A0B4J2F2 783 aa20.57■□□□□ 0.88
RAB40C-203ENST00000535977 GSG1L2A8MUP6 293 aa20.57■□□□□ 0.88
RAB40C-203ENST00000535977 SIK1P57059 783 aa20.57■□□□□ 0.88
RAB40C-203ENST00000535977 CTR9Q6PD62 1173 aa20.57■□□□□ 0.88
RAB40C-203ENST00000535977 RAB11FIP4Q86YS3 637 aa20.57■□□□□ 0.88
RAB40C-203ENST00000535977 CICQ96RK0 1608 aaPredicted RBP20.57■□□□□ 0.88
RAB40C-203ENST00000535977 SPATA31A1Q5TZJ5 1347 aa20.57■□□□□ 0.88
RAB40C-203ENST00000535977 CDC27P30260 824 aa20.57■□□□□ 0.88
RAB40C-203ENST00000535977 FILIP1Q7Z7B0 1213 aa20.57■□□□□ 0.88
RAB40C-203ENST00000535977 MICU3Q86XE3 530 aa20.57■□□□□ 0.88
RAB40C-203ENST00000535977 SMARCC1Q92922 1105 aaPredicted RBP20.57■□□□□ 0.88
RAB40C-203ENST00000535977 EPB41L4AQ9HCS5 686 aaPredicted RBP20.57■□□□□ 0.88
RAB40C-203ENST00000535977 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.57■□□□□ 0.88
RAB40C-203ENST00000535977 FAM237AA0A1B0GTK4 181 aa20.56■□□□□ 0.88
RAB40C-203ENST00000535977 CCDC196A0A1B0GTZ2 297 aa20.56■□□□□ 0.88
RAB40C-203ENST00000535977 KIF2AO00139 706 aaPredicted RBP20.56■□□□□ 0.88
RAB40C-203ENST00000535977 IFNAR1P17181 557 aa20.56■□□□□ 0.88
RAB40C-203ENST00000535977 NLRP12P59046 1061 aa20.56■□□□□ 0.88
RAB40C-203ENST00000535977 CCDC93Q567U6 631 aa20.56■□□□□ 0.88
RAB40C-203ENST00000535977 TIAM2Q8IVF5 1701 aa20.56■□□□□ 0.88
RAB40C-203ENST00000535977 SLIT2O94813 1529 aa20.56■□□□□ 0.88
RAB40C-203ENST00000535977 GSDMDP57764 484 aa20.56■□□□□ 0.88
RAB40C-203ENST00000535977 IMPACTQ9P2X3 320 aa20.56■□□□□ 0.88
RAB40C-203ENST00000535977 ERICH2A1L162 156 aa20.55■□□□□ 0.88
RAB40C-203ENST00000535977 FMNL1O95466 1100 aaPredicted RBP20.55■□□□□ 0.88
RAB40C-203ENST00000535977 NTSR2O95665 410 aa20.55■□□□□ 0.88
RAB40C-203ENST00000535977 PFKFB1P16118 471 aa20.55■□□□□ 0.88
RAB40C-203ENST00000535977 CLEC4GQ6UXB4 293 aa20.55■□□□□ 0.88
RAB40C-203ENST00000535977 AOPEPQ8N6M6 819 aa20.55■□□□□ 0.88
RAB40C-203ENST00000535977 ARMT1Q9H993 441 aa20.55■□□□□ 0.88
RAB40C-203ENST00000535977 SEC31BQ9NQW1 1179 aa20.55■□□□□ 0.88
RAB40C-203ENST00000535977 DENND2AQ9ULE3 1009 aa20.55■□□□□ 0.88
RAB40C-203ENST00000535977 SEC31AO94979 1220 aaKnown RBP20.55■□□□□ 0.88
RAB40C-203ENST00000535977 GPS2Q13227 327 aa20.55■□□□□ 0.88
RAB40C-203ENST00000535977 PPP2R5BQ15173 497 aa20.55■□□□□ 0.88
RAB40C-203ENST00000535977 SRLQ86TD4 932 aa20.55■□□□□ 0.88
RAB40C-203ENST00000535977 UBXN6Q9BZV1 441 aa20.55■□□□□ 0.88
RAB40C-203ENST00000535977 FAM217BQ9NTX9 383 aaPredicted RBP20.55■□□□□ 0.88
RAB40C-203ENST00000535977 GNL3LQ9NVN8 582 aaKnown RBP20.55■□□□□ 0.88
RAB40C-203ENST00000535977 NIP7Q9Y221 180 aaKnown RBP eCLIP20.55■□□□□ 0.88
RAB40C-203ENST00000535977 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.55■□□□□ 0.885e-6■■■■□ 23
RAB40C-203ENST00000535977 TDO2P48775 406 aa20.55■□□□□ 0.88
RAB40C-203ENST00000535977 PSEN1P49768 467 aa20.55■□□□□ 0.88
RAB40C-203ENST00000535977 SAFBQ15424 915 aaKnown RBP eCLIP20.55■□□□□ 0.88
RAB40C-203ENST00000535977 TRIM22Q8IYM9 498 aa20.55■□□□□ 0.88
RAB40C-203ENST00000535977 CWC15Q9P013 229 aaKnown RBP20.55■□□□□ 0.88
RAB40C-203ENST00000535977 SLC4A4Q9Y6R1 1079 aa20.55■□□□□ 0.88
RAB40C-203ENST00000535977 RGL2O15211 777 aa20.54■□□□□ 0.88
RAB40C-203ENST00000535977 CUTAO60888 179 aa20.54■□□□□ 0.88
RAB40C-203ENST00000535977 OAS2P29728 719 aaKnown RBP20.54■□□□□ 0.88
RAB40C-203ENST00000535977 SYKP43405 635 aa20.54■□□□□ 0.88
RAB40C-203ENST00000535977 ELOA2Q8IYF1 753 aaPredicted RBP20.54■□□□□ 0.88
RAB40C-203ENST00000535977 KCND1Q9NSA2 647 aa20.54■□□□□ 0.88
RAB40C-203ENST00000535977 GJB4Q9NTQ9 266 aa20.54■□□□□ 0.88
RAB40C-203ENST00000535977 ARGLU1Q9NWB6 273 aaPredicted RBP20.54■□□□□ 0.88
RAB40C-203ENST00000535977 LRP2BPQ9P2M1 347 aa20.54■□□□□ 0.88
RAB40C-203ENST00000535977 LAMB2P55268 1798 aa20.54■□□□□ 0.88
RAB40C-203ENST00000535977 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.54■□□□□ 0.88
RAB40C-203ENST00000535977 HPSEQ9Y251 543 aa20.54■□□□□ 0.88
RAB40C-203ENST00000535977 RRP15Q9Y3B9 282 aaKnown RBP20.54■□□□□ 0.88
RAB40C-203ENST00000535977 CHD4Q14839 1912 aa20.53■□□□□ 0.88
RAB40C-203ENST00000535977 BCAMP50895 628 aa20.53■□□□□ 0.88
RAB40C-203ENST00000535977 CTDSPL2Q05D32 466 aa20.53■□□□□ 0.88
RAB40C-203ENST00000535977 CHRNDQ07001 517 aa20.53■□□□□ 0.88
RAB40C-203ENST00000535977 PTPAQ15257 358 aa20.53■□□□□ 0.88
RAB40C-203ENST00000535977 PHKBQ93100 1093 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms