RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 MAPKAPK5Q8IW41 473 aa10.42□□□□□ -0.74
SFSWAP-202ENST00000535202 TGFBRAP1Q8WUH2 860 aa10.42□□□□□ -0.74
SFSWAP-202ENST00000535202 CPA4Q9UI42 421 aa10.42□□□□□ -0.74
SFSWAP-202ENST00000535202 NDUFB9Q9Y6M9 179 aa10.42□□□□□ -0.74
SFSWAP-202ENST00000535202 A0A0G2JLL6 359 aaPredicted RBP10.41□□□□□ -0.74
SFSWAP-202ENST00000535202 TRIM75PA6NK02 468 aa10.41□□□□□ -0.74
SFSWAP-202ENST00000535202 CYP7A1P22680 504 aa10.41□□□□□ -0.74
SFSWAP-202ENST00000535202 PPP4CP60510 307 aa10.41□□□□□ -0.74
SFSWAP-202ENST00000535202 DYNLL1P63167 89 aaKnown RBP10.41□□□□□ -0.74
SFSWAP-202ENST00000535202 LACTBP83111 547 aaPredicted RBP10.41□□□□□ -0.74
SFSWAP-202ENST00000535202 GPAT2Q6NUI2 795 aa10.41□□□□□ -0.74
SFSWAP-202ENST00000535202 C17orf99Q6UX52 265 aa10.41□□□□□ -0.74
SFSWAP-202ENST00000535202 PRRT2Q7Z6L0 340 aaPredicted RBP10.41□□□□□ -0.74
SFSWAP-202ENST00000535202 RPAP2Q8IXW5 612 aaPredicted RBP10.41□□□□□ -0.74
SFSWAP-202ENST00000535202 RHPN1Q8TCX5 695 aa10.41□□□□□ -0.74
SFSWAP-202ENST00000535202 PARK7Q99497 189 aaKnown RBP10.41□□□□□ -0.74
SFSWAP-202ENST00000535202 ARHGAP39Q9C0H5 1083 aa10.41□□□□□ -0.74
SFSWAP-202ENST00000535202 CHMP4BQ9H444 224 aaKnown RBP10.41□□□□□ -0.74
SFSWAP-202ENST00000535202 ANTXR1Q9H6X2 564 aa10.41□□□□□ -0.74
SFSWAP-202ENST00000535202 ZBTB40Q9NUA8 1239 aa10.41□□□□□ -0.74
SFSWAP-202ENST00000535202 AFG3L2Q9Y4W6 797 aa10.41□□□□□ -0.74
SFSWAP-202ENST00000535202 PTCH2Q9Y6C5 1203 aa10.41□□□□□ -0.74
SFSWAP-202ENST00000535202 FLT1P17948 1338 aa10.4□□□□□ -0.74
SFSWAP-202ENST00000535202 ADGRA2Q96PE1 1338 aa10.4□□□□□ -0.74
SFSWAP-202ENST00000535202 CYP2C8P10632 490 aa10.4□□□□□ -0.74
SFSWAP-202ENST00000535202 C20orf194Q5TEA3 1177 aa10.4□□□□□ -0.74
SFSWAP-202ENST00000535202 FASTKD5Q7L8L6 764 aaKnown RBP10.4□□□□□ -0.74
SFSWAP-202ENST00000535202 SIRT2Q8IXJ6 389 aa10.4□□□□□ -0.74
SFSWAP-202ENST00000535202 CLASRPQ8N2M8 674 aaKnown RBP10.4□□□□□ -0.74
SFSWAP-202ENST00000535202 MAGEB6Q8N7X4 407 aa10.4□□□□□ -0.74
SFSWAP-202ENST00000535202 MIGA1Q8NAN2 632 aa10.4□□□□□ -0.74
SFSWAP-202ENST00000535202 KIF1BPQ96EK5 621 aa10.4□□□□□ -0.74
SFSWAP-202ENST00000535202 PI4KBQ9UBF8 816 aa10.4□□□□□ -0.74
SFSWAP-202ENST00000535202 MYH1P12882 1939 aa10.4□□□□□ -0.74
SFSWAP-202ENST00000535202 RBBP6Q7Z6E9 1792 aaKnown RBP10.39□□□□□ -0.75
SFSWAP-202ENST00000535202 MGAMO43451 1857 aa10.39□□□□□ -0.75
SFSWAP-202ENST00000535202 IGSF3O75054 1194 aa10.39□□□□□ -0.75
SFSWAP-202ENST00000535202 IFIT2P09913 472 aaKnown RBP10.39□□□□□ -0.75
SFSWAP-202ENST00000535202 PSMC4P43686 418 aa10.39□□□□□ -0.75
SFSWAP-202ENST00000535202 MAP3K12Q12852 859 aa10.39□□□□□ -0.75
SFSWAP-202ENST00000535202 RRP1BQ14684 758 aaKnown RBP10.39□□□□□ -0.75
SFSWAP-202ENST00000535202 SLC4A8Q2Y0W8 1093 aa10.39□□□□□ -0.75
SFSWAP-202ENST00000535202 SLC9C1Q4G0N8 1177 aa10.39□□□□□ -0.75
SFSWAP-202ENST00000535202 CRACR2BQ8N4Y2 399 aaPredicted RBP10.39□□□□□ -0.75
SFSWAP-202ENST00000535202 ARMC5Q96C12 935 aa10.39□□□□□ -0.75
SFSWAP-202ENST00000535202 TRIM34Q9BYJ4 488 aa10.39□□□□□ -0.75
SFSWAP-202ENST00000535202 DHX36Q9H2U1 1008 aaKnown RBP10.39□□□□□ -0.75
SFSWAP-202ENST00000535202 SAP30BPQ9UHR5 308 aaKnown RBP10.39□□□□□ -0.75
SFSWAP-202ENST00000535202 HERC5Q9UII4 1024 aaKnown RBP10.39□□□□□ -0.75
SFSWAP-202ENST00000535202 LOC285556D6RIA3 1793 aa10.39□□□□□ -0.75
SFSWAP-202ENST00000535202 POTEFA5A3E0 1075 aa10.38□□□□□ -0.75
SFSWAP-202ENST00000535202 RAB11FIP3O75154 756 aa10.38□□□□□ -0.75
SFSWAP-202ENST00000535202 FMNL1O95466 1100 aaPredicted RBP10.38□□□□□ -0.75
SFSWAP-202ENST00000535202 HLA-DOAP06340 250 aa10.38□□□□□ -0.75
SFSWAP-202ENST00000535202 CTGFP29279 349 aa10.38□□□□□ -0.75
SFSWAP-202ENST00000535202 CAP2P40123 477 aa10.38□□□□□ -0.75
SFSWAP-202ENST00000535202 USP5P45974 858 aa10.38□□□□□ -0.75
SFSWAP-202ENST00000535202 DNAJC2Q99543 621 aaKnown RBP10.38□□□□□ -0.75
SFSWAP-202ENST00000535202 PALD1Q9ULE6 856 aa10.38□□□□□ -0.75
SFSWAP-202ENST00000535202 NAV1Q8NEY1 1877 aa10.38□□□□□ -0.75
SFSWAP-202ENST00000535202 USP17L5A8MUK1 530 aa10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 GDF11O95390 407 aa10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 MYCP01106 439 aaPredicted RBP10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 GNRH1P01148 92 aa10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 BCRP11274 1271 aa10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 OSBPP22059 807 aa10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 SPP2Q13103 211 aa10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 PDE3AQ14432 1141 aa10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 TTF1Q15361 905 aaPredicted RBP10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 TREML2Q5T2D2 321 aa10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 NBPF11Q86T75 865 aa10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 ZNF280CQ8ND82 737 aa10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 SMCR8Q8TEV9 937 aaPredicted RBP10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 SH3TC2Q8TF17 1288 aa10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 ZNF333Q96JL9 665 aa10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 TRIM47Q96LD4 638 aa10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 TMEM106CQ9BVX2 250 aa10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 TBC1D2Q9BYX2 928 aa10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 DNAJC18Q9H819 358 aa10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 AS3MTQ9HBK9 375 aa10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 AGTPBP1Q9UPW5 1226 aa10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 SLC45A1Q9Y2W3 748 aa10.37□□□□□ -0.75
SFSWAP-202ENST00000535202 MYPNQ86TC9 1320 aa10.36□□□□□ -0.75
SFSWAP-202ENST00000535202 GOLIM4O00461 696 aa10.36□□□□□ -0.75
SFSWAP-202ENST00000535202 HOXD10P28358 340 aa10.36□□□□□ -0.75
SFSWAP-202ENST00000535202 HMGCS2P54868 508 aa10.36□□□□□ -0.75
SFSWAP-202ENST00000535202 PRMT2P55345 433 aa10.36□□□□□ -0.75
SFSWAP-202ENST00000535202 FCGRTP55899 365 aa10.36□□□□□ -0.75
SFSWAP-202ENST00000535202 CERS3Q8IU89 383 aa10.36□□□□□ -0.75
SFSWAP-202ENST00000535202 FOXP4Q8IVH2 680 aaPredicted RBP10.36□□□□□ -0.75
SFSWAP-202ENST00000535202 PROCA1Q8NCQ7 364 aaPredicted RBP10.36□□□□□ -0.75
SFSWAP-202ENST00000535202 RAET1EQ8TD07 263 aa10.36□□□□□ -0.75
SFSWAP-202ENST00000535202 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.36□□□□□ -0.75
SFSWAP-202ENST00000535202 PPP4R2Q9NY27 417 aa10.36□□□□□ -0.75
SFSWAP-202ENST00000535202 SRRDQ9UH36 339 aa10.36□□□□□ -0.75
SFSWAP-202ENST00000535202 PNMA3Q9UL41 463 aa10.36□□□□□ -0.75
SFSWAP-202ENST00000535202 DDX60LQ5H9U9 1706 aaKnown RBP10.36□□□□□ -0.75
SFSWAP-202ENST00000535202 MAGEB6P1A0A0J9YX57 407 aa10.35□□□□□ -0.75
SFSWAP-202ENST00000535202 ASNSP08243 561 aa10.35□□□□□ -0.75
SFSWAP-202ENST00000535202 PDE6AP16499 860 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms