RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 LBHD1Q9BQE6 289 aaPredicted RBP7□□□□□ -1.29
CTSB-216ENST00000530290 NUDT12Q9BQG2 462 aa7□□□□□ -1.29
CTSB-216ENST00000530290 PUS3Q9BZE2 481 aaKnown RBP7□□□□□ -1.29
CTSB-216ENST00000530290 BICC1Q9H694 974 aaKnown RBP7□□□□□ -1.29
CTSB-216ENST00000530290 AS3MTQ9HBK9 375 aa7□□□□□ -1.29
CTSB-216ENST00000530290 GINM1Q9NU53 330 aa7□□□□□ -1.29
CTSB-216ENST00000530290 USP40Q9NVE5 1235 aa7□□□□□ -1.29
CTSB-216ENST00000530290 MORF4L1Q9UBU8 362 aa7□□□□□ -1.29
CTSB-216ENST00000530290 HDAC5Q9UQL6 1122 aa7□□□□□ -1.29
CTSB-216ENST00000530290 CDH23Q9H251 3354 aa7□□□□□ -1.29
CTSB-216ENST00000530290 LTBP2Q14767 1821 aa6.99□□□□□ -1.29
CTSB-216ENST00000530290 LAMA2P24043 3122 aaKnown RBP6.99□□□□□ -1.29
CTSB-216ENST00000530290 TRIM75PA6NK02 468 aa6.99□□□□□ -1.29
CTSB-216ENST00000530290 EYA2O00167 538 aa6.99□□□□□ -1.29
CTSB-216ENST00000530290 CIAO1O76071 339 aa6.99□□□□□ -1.29
CTSB-216ENST00000530290 PRKAR2AP13861 404 aaKnown RBP6.99□□□□□ -1.29
CTSB-216ENST00000530290 ZKSCAN1P17029 563 aaPredicted RBP6.99□□□□□ -1.29
CTSB-216ENST00000530290 MAPK4P31152 587 aa6.99□□□□□ -1.29
CTSB-216ENST00000530290 RGS3P49796 1198 aa6.99□□□□□ -1.29
CTSB-216ENST00000530290 DDX10Q13206 875 aaKnown RBP6.99□□□□□ -1.29
CTSB-216ENST00000530290 SH3D19Q5HYK7 790 aa6.99□□□□□ -1.29
CTSB-216ENST00000530290 SPTY2D1Q68D10 685 aaPredicted RBP6.99□□□□□ -1.29
CTSB-216ENST00000530290 DZIP1Q86YF9 867 aaKnown RBP6.99□□□□□ -1.29
CTSB-216ENST00000530290 ZNF280CQ8ND82 737 aa6.99□□□□□ -1.29
CTSB-216ENST00000530290 KAZALD1Q96I82 304 aa6.99□□□□□ -1.29
CTSB-216ENST00000530290 SNX27Q96L92 541 aa6.99□□□□□ -1.29
CTSB-216ENST00000530290 PRKAG2Q9UGJ0 569 aa6.99□□□□□ -1.29
CTSB-216ENST00000530290 HERC5Q9UII4 1024 aaKnown RBP6.99□□□□□ -1.29
CTSB-216ENST00000530290 GJD2Q9UKL4 321 aa6.99□□□□□ -1.29
CTSB-216ENST00000530290 PIEZO1Q92508 2521 aa6.99□□□□□ -1.29
CTSB-216ENST00000530290 PFASO15067 1338 aa6.99□□□□□ -1.29
CTSB-216ENST00000530290 PTPRCP08575 1304 aa6.99□□□□□ -1.29
CTSB-216ENST00000530290 PRUNE2Q8WUY3 3088 aa6.98□□□□□ -1.29
CTSB-216ENST00000530290 IGSF3O75054 1194 aa6.98□□□□□ -1.29
CTSB-216ENST00000530290 GLRX3O76003 335 aaKnown RBP6.98□□□□□ -1.29
CTSB-216ENST00000530290 PRDX5P30044 214 aa6.98□□□□□ -1.29
CTSB-216ENST00000530290 HOXA7P31268 230 aaPredicted RBP6.98□□□□□ -1.29
CTSB-216ENST00000530290 RGS2P41220 211 aa6.98□□□□□ -1.29
CTSB-216ENST00000530290 IRX3P78415 501 aaPredicted RBP6.98□□□□□ -1.29
CTSB-216ENST00000530290 DIXDC1Q155Q3 683 aa6.98□□□□□ -1.29
CTSB-216ENST00000530290 LRRC24Q50LG9 513 aa6.98□□□□□ -1.29
CTSB-216ENST00000530290 SLC4A10Q6U841 1118 aa6.98□□□□□ -1.29
CTSB-216ENST00000530290 ANKRD44Q8N8A2 993 aa6.98□□□□□ -1.29
CTSB-216ENST00000530290 TRIB2Q92519 343 aa6.98□□□□□ -1.29
CTSB-216ENST00000530290 GUCD1Q96NT3 240 aa6.98□□□□□ -1.29
CTSB-216ENST00000530290 APBA2Q99767 749 aa6.98□□□□□ -1.29
CTSB-216ENST00000530290 RLFQ13129 1914 aa6.97□□□□□ -1.29
CTSB-216ENST00000530290 ZNF236Q9UL36 1845 aa6.97□□□□□ -1.29
CTSB-216ENST00000530290 USP17L5A8MUK1 530 aa6.97□□□□□ -1.29
CTSB-216ENST00000530290 C19orf81C9J6K1 198 aa6.97□□□□□ -1.29
CTSB-216ENST00000530290 ASNSP08243 561 aa6.97□□□□□ -1.29
CTSB-216ENST00000530290 NBPF7P0C2Y1 421 aaPredicted RBP6.97□□□□□ -1.29
CTSB-216ENST00000530290 SYN1P17600 705 aa6.97□□□□□ -1.29
CTSB-216ENST00000530290 CCNA1P78396 465 aa6.97□□□□□ -1.29
CTSB-216ENST00000530290 GSTO1P78417 241 aa6.97□□□□□ -1.29
CTSB-216ENST00000530290 SMAD3P84022 425 aaKnown RBP6.97□□□□□ -1.29
CTSB-216ENST00000530290 EXOSC9Q06265 439 aaKnown RBP6.97□□□□□ -1.29
CTSB-216ENST00000530290 ATP2B3Q16720 1220 aa6.97□□□□□ -1.29
CTSB-216ENST00000530290 TREML2Q5T2D2 321 aa6.97□□□□□ -1.29
CTSB-216ENST00000530290 CCAR1Q8IX12 1150 aaKnown RBP6.97□□□□□ -1.29
CTSB-216ENST00000530290 GPRC5AQ8NFJ5 357 aa6.97□□□□□ -1.29
CTSB-216ENST00000530290 WDR18Q9BV38 432 aa6.97□□□□□ -1.29
CTSB-216ENST00000530290 ASCC2Q9H1I8 757 aaPredicted RBP6.97□□□□□ -1.29
CTSB-216ENST00000530290 TMOD4Q9NZQ9 345 aa6.97□□□□□ -1.29
CTSB-216ENST00000530290 MROH7-TTC4A0A0A0MT08 1334 aa6.97□□□□□ -1.29
CTSB-216ENST00000530290 FOCADQ5VW36 1801 aa6.97□□□□□ -1.29
CTSB-216ENST00000530290 DNM1LO00429 736 aa6.96□□□□□ -1.3
CTSB-216ENST00000530290 LDHCP07864 332 aa6.96□□□□□ -1.3
CTSB-216ENST00000530290 CAP2P40123 477 aa6.96□□□□□ -1.3
CTSB-216ENST00000530290 IL15P40933 162 aaPredicted RBP6.96□□□□□ -1.3
CTSB-216ENST00000530290 BTDP43251 543 aa6.96□□□□□ -1.3
CTSB-216ENST00000530290 HMGCS2P54868 508 aa6.96□□□□□ -1.3
CTSB-216ENST00000530290 SPP2Q13103 211 aa6.96□□□□□ -1.3
CTSB-216ENST00000530290 MFSD14CQ5VZR4 134 aa6.96□□□□□ -1.3
CTSB-216ENST00000530290 MAFAQ8NHW3 353 aaPredicted RBP6.96□□□□□ -1.3
CTSB-216ENST00000530290 DHX36Q9H2U1 1008 aaKnown RBP6.96□□□□□ -1.3
CTSB-216ENST00000530290 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.96□□□□□ -1.3
CTSB-216ENST00000530290 CEP126Q9P2H0 1117 aa6.96□□□□□ -1.3
CTSB-216ENST00000530290 SYNGAP1Q96PV0 1343 aa6.96□□□□□ -1.3
CTSB-216ENST00000530290 DNAH12Q6ZR08 3092 aa6.95□□□□□ -1.3
CTSB-216ENST00000530290 GPR75-ASB3A0A0A6YYF3 556 aa6.95□□□□□ -1.3
CTSB-216ENST00000530290 DDTLA6NHG4 134 aaPredicted RBP6.95□□□□□ -1.3
CTSB-216ENST00000530290 PLCG2P16885 1265 aa6.95□□□□□ -1.3
CTSB-216ENST00000530290 CYP2B6P20813 491 aa6.95□□□□□ -1.3
CTSB-216ENST00000530290 BACE1P56817 501 aa6.95□□□□□ -1.3
CTSB-216ENST00000530290 HERVK_113P62684 666 aa6.95□□□□□ -1.3
CTSB-216ENST00000530290 ERVK-9P63128 1117 aa6.95□□□□□ -1.3
CTSB-216ENST00000530290 ERVK-24P63145 666 aa6.95□□□□□ -1.3
CTSB-216ENST00000530290 MDM2Q00987 491 aaPredicted RBP6.95□□□□□ -1.3
CTSB-216ENST00000530290 MVPQ14764 893 aaKnown RBP6.95□□□□□ -1.3
CTSB-216ENST00000530290 LRRC26Q2I0M4 334 aa6.95□□□□□ -1.3
CTSB-216ENST00000530290 ATF7IPQ6VMQ6 1270 aa6.95□□□□□ -1.3
CTSB-216ENST00000530290 ERICH6Q7L0X2 663 aa6.95□□□□□ -1.3
CTSB-216ENST00000530290 SH3BP5LQ7L8J4 393 aa6.95□□□□□ -1.3
CTSB-216ENST00000530290 LPAR1Q92633 364 aa6.95□□□□□ -1.3
CTSB-216ENST00000530290 USP6NLQ92738 828 aa6.95□□□□□ -1.3
CTSB-216ENST00000530290 CWC22Q9HCG8 908 aaKnown RBP6.95□□□□□ -1.3
CTSB-216ENST00000530290 PI4KBQ9UBF8 816 aa6.95□□□□□ -1.3
CTSB-216ENST00000530290 CDK5RAP2Q96SN8 1893 aa6.94□□□□□ -1.3
CTSB-216ENST00000530290 USP17L10C9JJH3 530 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms