RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 PRKCZQ05513 592 aa21.47■■□□□ 1.03
CKLF-CMTM1-202ENST00000527845 PABPC4Q13310 644 aaKnown RBP eCLIP21.47■■□□□ 1.039e-11■■□□□ 12.1
CKLF-CMTM1-202ENST00000527845 TNNI3KQ59H18 835 aa21.47■■□□□ 1.03
CKLF-CMTM1-202ENST00000527845 TBC1D9Q6ZT07 1266 aa21.47■■□□□ 1.03
CKLF-CMTM1-202ENST00000527845 FTSJ3Q8IY81 847 aaKnown RBP21.47■■□□□ 1.03
CKLF-CMTM1-202ENST00000527845 SSH3Q8TE77 659 aa21.47■■□□□ 1.03
CKLF-CMTM1-202ENST00000527845 BIN2Q9UBW5 565 aaPredicted RBP21.47■■□□□ 1.03
CKLF-CMTM1-202ENST00000527845 TNNQ9UQP3 1299 aa21.47■■□□□ 1.03
CKLF-CMTM1-202ENST00000527845 FPGT-TNNI3KV9GXZ4 949 aa21.47■■□□□ 1.03
CKLF-CMTM1-202ENST00000527845 FOCADQ5VW36 1801 aa21.46■■□□□ 1.03
CKLF-CMTM1-202ENST00000527845 GJB1P08034 283 aa21.46■■□□□ 1.03
CKLF-CMTM1-202ENST00000527845 MTFR1Q15390 333 aa21.46■■□□□ 1.03
CKLF-CMTM1-202ENST00000527845 NAA16Q6N069 864 aaPredicted RBP21.46■■□□□ 1.03
CKLF-CMTM1-202ENST00000527845 ZNF512BQ96KM6 892 aaPredicted RBP21.46■■□□□ 1.03
CKLF-CMTM1-202ENST00000527845 AS3MTQ9HBK9 375 aa21.46■■□□□ 1.03
CKLF-CMTM1-202ENST00000527845 TNPO2O14787 897 aaKnown RBP21.45■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 CCL5P13501 91 aa21.45■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 CAP2P40123 477 aa21.45■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 GJA8P48165 433 aa21.45■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 ATP8B2P98198 1209 aa21.45■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 FAM110CQ1W6H9 321 aa21.45■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 ZNF280CQ8ND82 737 aa21.45■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 PI4KBQ9UBF8 816 aa21.45■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 CDK5RAP2Q96SN8 1893 aa21.44■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 GCLCP48506 637 aaPredicted RBP21.44■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 IRF5Q13568 498 aa21.44■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 PXYLP1Q8TE99 480 aa21.44■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 RNF208Q9H0X6 261 aa21.44■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 USP17L5A8MUK1 530 aa21.43■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 ADCY3O60266 1144 aa21.43■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 PPP4CP60510 307 aa21.43■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 CERS3Q8IU89 383 aa21.43■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 COA7Q96BR5 231 aa21.43■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 SHISA4Q96DD7 197 aa21.43■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 HTATIP2Q9BUP3 242 aa21.43■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 GINM1Q9NU53 330 aa21.43■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 FAM196BA6NMK8 535 aa21.42■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 SIPA1L1O43166 1804 aa21.42■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 SURF6O75683 361 aaKnown RBP21.42■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 SLURP2P0DP57 97 aa21.42■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 FLT3LGP49771 235 aa21.42■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 SPP2Q13103 211 aa21.42■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 SH3RF3Q8TEJ3 882 aaPredicted RBP21.42■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 DBNDD2Q9BQY9 259 aa21.42■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 AATFQ9NY61 560 aaKnown RBP eCLIP21.42■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 GABRQQ9UN88 632 aa21.42■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 NOP58Q9Y2X3 529 aaKnown RBP21.42■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 ASNSP08243 561 aa21.41■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 SH3D19Q5HYK7 790 aa21.41■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 TREML2Q5T2D2 321 aa21.41■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 TMED8Q6PL24 325 aaPredicted RBP21.41■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 ITPRIPQ8IWB1 547 aa21.41■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 ANKRD13CQ8N6S4 541 aa21.41■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 TRIM34Q9BYJ4 488 aa21.41■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.41■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 CCDC84Q86UT8 332 aaPredicted RBP21.4■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 FOXP4Q8IVH2 680 aaPredicted RBP21.4■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 SNRKQ9NRH2 765 aa21.4■■□□□ 1.02
CKLF-CMTM1-202ENST00000527845 FLT1P17948 1338 aa21.39■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 CYP2E1P05181 493 aaPredicted RBP21.39■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 HMGCS2P54868 508 aa21.39■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 HNRNPUQ00839 825 aaKnown RBP eCLIP21.39■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 METTL16Q86W50 562 aaKnown RBP21.39■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 CRACR2BQ8N4Y2 399 aaPredicted RBP21.39■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 U2AF1L4Q8WU68 220 aaKnown RBP21.39■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 WDR18Q9BV38 432 aa21.39■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 INHAP05111 366 aa21.38■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 HLA-DOAP06340 250 aa21.38■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 UBE2Q1Q7Z7E8 422 aa21.38■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 TGFBRAP1Q8WUH2 860 aa21.38■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 TMOD4Q9NZQ9 345 aa21.38■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 MYO5AQ9Y4I1 1855 aaKnown RBP21.38■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 ZBTB7BO15156 539 aaPredicted RBP21.37■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 FARP2O94887 1054 aaPredicted RBP21.37■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 SGPL1O95470 568 aa21.37■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 ERC1Q8IUD2 1116 aa21.37■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 MAPKAPK5Q8IW41 473 aa21.37■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 DPF3Q92784 378 aa21.37■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 UNC93B1Q9H1C4 597 aa21.37■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 C19orf81C9J6K1 198 aa21.36■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 H0YGN5 161 aa21.36■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 ZAP70P43403 619 aa21.36■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 BACE1P56817 501 aa21.36■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 IRX3P78415 501 aaPredicted RBP21.36■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 ASCC2Q9H1I8 757 aaPredicted RBP21.36■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 C1orf115Q9H7X2 142 aa21.36■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 DBNLQ9UJU6 430 aaKnown RBP21.36■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 ELNP15502 786 aa21.35■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 RRP1BQ14684 758 aaKnown RBP21.35■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 MORF4L1Q9UBU8 362 aa21.35■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 COLQQ9Y215 455 aaPredicted RBP21.35■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 NR2E3Q9Y5X4 410 aa21.35■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 MYH1P12882 1939 aa21.35■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 HOXA7P31268 230 aaPredicted RBP21.34■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 MTMR2Q13614 643 aa21.34■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 HSP90AB4PQ58FF6 505 aa21.34■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 ADGRA1Q86SQ6 560 aa21.34■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 GTF3C2Q8WUA4 911 aaPredicted RBP21.34■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 PIH1D3Q9NQM4 214 aaKnown RBP21.34■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 PAK6Q9NQU5 681 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms