RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 AOX1Q06278 1338 aa10.46□□□□□ -0.73
USP48-212ENST00000527823 CTSWP56202 376 aa10.45□□□□□ -0.74
USP48-212ENST00000527823 SKOR1P84550 965 aa10.45□□□□□ -0.74
USP48-212ENST00000527823 FOXJ1Q92949 421 aa10.45□□□□□ -0.74
USP48-212ENST00000527823 MYD88Q99836 296 aa10.45□□□□□ -0.74
USP48-212ENST00000527823 PTPN18Q99952 460 aa10.45□□□□□ -0.74
USP48-212ENST00000527823 DEFB129Q9H1M3 183 aa10.45□□□□□ -0.74
USP48-212ENST00000527823 HYPKQ9NX55 129 aa10.45□□□□□ -0.74
USP48-212ENST00000527823 PCDHAC2Q9Y5I4 1007 aa10.45□□□□□ -0.74
USP48-212ENST00000527823 PTCH2Q9Y6C5 1203 aa10.45□□□□□ -0.74
USP48-212ENST00000527823 ZNF804BA4D1E1 1349 aa10.44□□□□□ -0.74
USP48-212ENST00000527823 CCT4P50991 539 aaKnown RBP10.44□□□□□ -0.74
USP48-212ENST00000527823 INHBEP58166 350 aa10.44□□□□□ -0.74
USP48-212ENST00000527823 SP3Q02447 781 aa10.44□□□□□ -0.74
USP48-212ENST00000527823 AGERQ15109 404 aa10.44□□□□□ -0.74
USP48-212ENST00000527823 PDXDC2PQ6P474 469 aa10.44□□□□□ -0.74
USP48-212ENST00000527823 GPKOWQ92917 476 aaPredicted RBP eCLIP10.44□□□□□ -0.744e-6■□□□□ 9.1
USP48-212ENST00000527823 SHISA4Q96DD7 197 aa10.44□□□□□ -0.74
USP48-212ENST00000527823 COA1Q9GZY4 146 aa10.44□□□□□ -0.74
USP48-212ENST00000527823 PNNQ9H307 717 aaKnown RBP10.44□□□□□ -0.74
USP48-212ENST00000527823 GREM2Q9H772 168 aa10.44□□□□□ -0.74
USP48-212ENST00000527823 PHAXQ9H814 394 aaKnown RBP10.44□□□□□ -0.74
USP48-212ENST00000527823 MINPP1Q9UNW1 487 aa10.44□□□□□ -0.74
USP48-212ENST00000527823 MGAMO43451 1857 aa10.43□□□□□ -0.74
USP48-212ENST00000527823 SLC9C1Q4G0N8 1177 aa10.43□□□□□ -0.74
USP48-212ENST00000527823 DUSP27Q5VZP5 1158 aa10.43□□□□□ -0.74
USP48-212ENST00000527823 CERS5Q8N5B7 392 aa10.43□□□□□ -0.74
USP48-212ENST00000527823 CCDC191Q8NCU4 936 aa10.43□□□□□ -0.74
USP48-212ENST00000527823 SLC10A4Q96EP9 437 aa10.43□□□□□ -0.74
USP48-212ENST00000527823 CDC5LQ99459 802 aaKnown RBP10.43□□□□□ -0.74
USP48-212ENST00000527823 CWC25Q9NXE8 425 aaPredicted RBP10.43□□□□□ -0.74
USP48-212ENST00000527823 LAS1LQ9Y4W2 734 aaKnown RBP10.43□□□□□ -0.74
USP48-212ENST00000527823 IRS2Q9Y4H2 1338 aa10.42□□□□□ -0.74
USP48-212ENST00000527823 CLRN2A0PK11 232 aa10.42□□□□□ -0.74
USP48-212ENST00000527823 MYCP01106 439 aaPredicted RBP10.42□□□□□ -0.74
USP48-212ENST00000527823 FBXO45P0C2W1 286 aa10.42□□□□□ -0.74
USP48-212ENST00000527823 HSP90B1P14625 803 aaKnown RBP10.42□□□□□ -0.74
USP48-212ENST00000527823 PTK2Q05397 1052 aa10.42□□□□□ -0.74
USP48-212ENST00000527823 VAC14Q08AM6 782 aa10.42□□□□□ -0.74
USP48-212ENST00000527823 SH3BP5LQ7L8J4 393 aa10.42□□□□□ -0.74
USP48-212ENST00000527823 CCDC146Q8IYE0 955 aa10.42□□□□□ -0.74
USP48-212ENST00000527823 OCSTAMPQ9BR26 566 aa10.42□□□□□ -0.74
USP48-212ENST00000527823 ARHGAP9Q9BRR9 750 aa10.42□□□□□ -0.74
USP48-212ENST00000527823 PRO3102Q9H379 93 aa10.42□□□□□ -0.74
USP48-212ENST00000527823 BSDC1Q9NW68 430 aaPredicted RBP10.42□□□□□ -0.74
USP48-212ENST00000527823 PPP2R3BQ9Y5P8 575 aa10.42□□□□□ -0.74
USP48-212ENST00000527823 MAGEB6P1A0A0J9YX57 407 aa10.41□□□□□ -0.74
USP48-212ENST00000527823 ZBBXA8MT70 800 aa10.41□□□□□ -0.74
USP48-212ENST00000527823 DLL1O00548 723 aa10.41□□□□□ -0.74
USP48-212ENST00000527823 PPP1R12BO60237 982 aaPredicted RBP10.41□□□□□ -0.74
USP48-212ENST00000527823 TRAK2O60296 914 aa10.41□□□□□ -0.74
USP48-212ENST00000527823 MMP14P50281 582 aa10.41□□□□□ -0.74
USP48-212ENST00000527823 GTF2IP78347 998 aa10.41□□□□□ -0.74
USP48-212ENST00000527823 C4orf48Q5BLP8 95 aa10.41□□□□□ -0.74
USP48-212ENST00000527823 NBPF12Q5TAG4 269 aaPredicted RBP10.41□□□□□ -0.74
USP48-212ENST00000527823 TTLL5Q6EMB2 1281 aa10.41□□□□□ -0.74
USP48-212ENST00000527823 WWC1Q8IX03 1113 aa10.41□□□□□ -0.74
USP48-212ENST00000527823 TTLL11Q8NHH1 800 aa10.41□□□□□ -0.74
USP48-212ENST00000527823 SH3TC2Q8TF17 1288 aa10.41□□□□□ -0.74
USP48-212ENST00000527823 BRI3BPQ8WY22 251 aa10.41□□□□□ -0.74
USP48-212ENST00000527823 ARHGAP39Q9C0H5 1083 aa10.41□□□□□ -0.74
USP48-212ENST00000527823 MBIPQ9NS73 344 aa10.41□□□□□ -0.74
USP48-212ENST00000527823 UNCXA6NJT0 531 aa10.4□□□□□ -0.74
USP48-212ENST00000527823 WNT7BP56706 349 aa10.4□□□□□ -0.74
USP48-212ENST00000527823 DLGAP5Q15398 846 aa10.4□□□□□ -0.74
USP48-212ENST00000527823 SLC4A8Q2Y0W8 1093 aa10.4□□□□□ -0.74
USP48-212ENST00000527823 BPHLQ86WA6 291 aaPredicted RBP10.4□□□□□ -0.74
USP48-212ENST00000527823 ANKRD13AQ8IZ07 590 aa10.4□□□□□ -0.74
USP48-212ENST00000527823 OPTNQ96CV9 577 aa10.4□□□□□ -0.74
USP48-212ENST00000527823 METTL22Q9BUU2 404 aaPredicted RBP10.4□□□□□ -0.74
USP48-212ENST00000527823 ELP3Q9H9T3 547 aa10.4□□□□□ -0.74
USP48-212ENST00000527823 VCANP13611 3396 aa10.4□□□□□ -0.75
USP48-212ENST00000527823 POM121CA8CG34 1229 aa10.39□□□□□ -0.75
USP48-212ENST00000527823 USP2O75604 605 aaPredicted RBP10.39□□□□□ -0.75
USP48-212ENST00000527823 IGKV5-2P06315 115 aa10.39□□□□□ -0.75
USP48-212ENST00000527823 IREB2P48200 963 aaKnown RBP10.39□□□□□ -0.75
USP48-212ENST00000527823 NR1H3Q13133 447 aa10.39□□□□□ -0.75
USP48-212ENST00000527823 TAF1CQ15572 869 aaPredicted RBP10.39□□□□□ -0.75
USP48-212ENST00000527823 ZNF697Q5TEC3 545 aa10.39□□□□□ -0.75
USP48-212ENST00000527823 OTUD7BQ6GQQ9 843 aa10.39□□□□□ -0.75
USP48-212ENST00000527823 SH3RF1Q7Z6J0 888 aa10.39□□□□□ -0.75
USP48-212ENST00000527823 ZBTB33Q86T24 672 aa10.39□□□□□ -0.75
USP48-212ENST00000527823 FAM43AQ8N2R8 423 aa10.39□□□□□ -0.75
USP48-212ENST00000527823 VEZTQ9HBM0 779 aa10.39□□□□□ -0.75
USP48-212ENST00000527823 LEMD3Q9Y2U8 911 aa10.39□□□□□ -0.75
USP48-212ENST00000527823 V9GY48 417 aaPredicted RBP10.39□□□□□ -0.75
USP48-212ENST00000527823 CCL15-CCL14A0A0B4J2E2 113 aa10.38□□□□□ -0.75
USP48-212ENST00000527823 F8W031 263 aaPredicted RBP10.38□□□□□ -0.75
USP48-212ENST00000527823 SNAP23O00161 211 aa10.38□□□□□ -0.75
USP48-212ENST00000527823 CCL15Q16663 113 aa10.38□□□□□ -0.75
USP48-212ENST00000527823 CFAP100Q494V2 611 aa10.38□□□□□ -0.75
USP48-212ENST00000527823 ZNF598Q86UK7 904 aaKnown RBP10.38□□□□□ -0.75
USP48-212ENST00000527823 ADAM32Q8TC27 787 aa10.38□□□□□ -0.75
USP48-212ENST00000527823 CD209Q9NNX6 404 aa10.38□□□□□ -0.75
USP48-212ENST00000527823 GPSM3Q9Y4H4 160 aa10.38□□□□□ -0.75
USP48-212ENST00000527823 PTPRFP10586 1907 aa10.37□□□□□ -0.75
USP48-212ENST00000527823 MYH13Q9UKX3 1938 aa10.37□□□□□ -0.75
USP48-212ENST00000527823 SOX1O00570 391 aaPredicted RBP10.37□□□□□ -0.75
USP48-212ENST00000527823 VGLL4Q14135 290 aa10.37□□□□□ -0.75
USP48-212ENST00000527823 RASA3Q14644 834 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms