RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 SH3D19Q5HYK7 790 aa20.35■□□□□ 0.85
CHMP4A-203ENST00000527154 TAOK2Q9UL54 1235 aa20.35■□□□□ 0.85
CHMP4A-203ENST00000527154 LHX8Q68G74 356 aa20.34■□□□□ 0.85
CHMP4A-203ENST00000527154 CCDC84Q86UT8 332 aaPredicted RBP20.34■□□□□ 0.85
CHMP4A-203ENST00000527154 TBC1D2Q9BYX2 928 aa20.34■□□□□ 0.85
CHMP4A-203ENST00000527154 CDH23Q9H251 3354 aa20.34■□□□□ 0.85
CHMP4A-203ENST00000527154 ZEB1P37275 1124 aaPredicted RBP20.33■□□□□ 0.85
CHMP4A-203ENST00000527154 USP6NLQ92738 828 aa20.33■□□□□ 0.85
CHMP4A-203ENST00000527154 USP44Q9H0E7 712 aa20.33■□□□□ 0.85
CHMP4A-203ENST00000527154 OSBPL5Q9H0X9 879 aaPredicted RBP20.33■□□□□ 0.85
CHMP4A-203ENST00000527154 ASCC2Q9H1I8 757 aaPredicted RBP20.33■□□□□ 0.85
CHMP4A-203ENST00000527154 FBXO3Q9UK99 471 aa20.33■□□□□ 0.85
CHMP4A-203ENST00000527154 TTC28Q96AY4 2481 aa20.33■□□□□ 0.84
CHMP4A-203ENST00000527154 PDS5AQ29RF7 1337 aaKnown RBP20.32■□□□□ 0.84
CHMP4A-203ENST00000527154 LRRC26Q2I0M4 334 aa20.32■□□□□ 0.84
CHMP4A-203ENST00000527154 ZNF280CQ8ND82 737 aa20.32■□□□□ 0.84
CHMP4A-203ENST00000527154 DENND2AQ9ULE3 1009 aa20.32■□□□□ 0.84
CHMP4A-203ENST00000527154 PRKAR2AP13861 404 aaKnown RBP20.31■□□□□ 0.84
CHMP4A-203ENST00000527154 RHBDL3P58872 404 aa20.31■□□□□ 0.84
CHMP4A-203ENST00000527154 PABPC4Q13310 644 aaKnown RBP eCLIP20.31■□□□□ 0.84
CHMP4A-203ENST00000527154 MYH2Q9UKX2 1941 aa20.31■□□□□ 0.84
CHMP4A-203ENST00000527154 SPP2Q13103 211 aa20.3■□□□□ 0.84
CHMP4A-203ENST00000527154 ZGPATQ8N5A5 531 aaKnown RBP20.3■□□□□ 0.84
CHMP4A-203ENST00000527154 SOCS4Q8WXH5 440 aa20.3■□□□□ 0.84
CHMP4A-203ENST00000527154 PRDM6Q9NQX0 595 aa20.3■□□□□ 0.84
CHMP4A-203ENST00000527154 GNL3LQ9NVN8 582 aaKnown RBP20.3■□□□□ 0.84
CHMP4A-203ENST00000527154 CIAO1O76071 339 aa20.29■□□□□ 0.84
CHMP4A-203ENST00000527154 HOXA7P31268 230 aaPredicted RBP20.29■□□□□ 0.84
CHMP4A-203ENST00000527154 PHKA1P46020 1223 aa20.29■□□□□ 0.84
CHMP4A-203ENST00000527154 TRMT44Q8IYL2 757 aaKnown RBP20.29■□□□□ 0.84
CHMP4A-203ENST00000527154 GPR75-ASB3A0A0A6YYF3 556 aa20.28■□□□□ 0.84
CHMP4A-203ENST00000527154 HMGCS2P54868 508 aa20.28■□□□□ 0.84
CHMP4A-203ENST00000527154 CACNB2Q08289 660 aaPredicted RBP20.28■□□□□ 0.84
CHMP4A-203ENST00000527154 RRP1BQ14684 758 aaKnown RBP20.28■□□□□ 0.84
CHMP4A-203ENST00000527154 ATP2B3Q16720 1220 aa20.28■□□□□ 0.84
CHMP4A-203ENST00000527154 ZSCAN29Q8IWY8 852 aaPredicted RBP20.28■□□□□ 0.84
CHMP4A-203ENST00000527154 ZNF384Q8TF68 577 aa20.28■□□□□ 0.84
CHMP4A-203ENST00000527154 MAST2Q6P0Q8 1798 aa20.28■□□□□ 0.84
CHMP4A-203ENST00000527154 CAP2P40123 477 aa20.27■□□□□ 0.84
CHMP4A-203ENST00000527154 BTDP43251 543 aa20.27■□□□□ 0.84
CHMP4A-203ENST00000527154 MDM2Q00987 491 aaPredicted RBP20.27■□□□□ 0.84
CHMP4A-203ENST00000527154 NUDT12Q9BQG2 462 aa20.27■□□□□ 0.84
CHMP4A-203ENST00000527154 MROH7-TTC4A0A0A0MT08 1334 aa20.27■□□□□ 0.83
CHMP4A-203ENST00000527154 MAP4K4O95819 1239 aaPredicted RBP20.26■□□□□ 0.83
CHMP4A-203ENST00000527154 CYP2B6P20813 491 aa20.26■□□□□ 0.83
CHMP4A-203ENST00000527154 MORN1Q5T089 497 aa20.26■□□□□ 0.83
CHMP4A-203ENST00000527154 SLF2Q8IX21 1173 aa20.26■□□□□ 0.83
CHMP4A-203ENST00000527154 WDR18Q9BV38 432 aa20.26■□□□□ 0.83
CHMP4A-203ENST00000527154 TXNRD2Q9NNW7 524 aa20.26■□□□□ 0.83
CHMP4A-203ENST00000527154 RASGRF1Q13972 1273 aa20.25■□□□□ 0.83
CHMP4A-203ENST00000527154 CCDC102BQ68D86 513 aa20.25■□□□□ 0.83
CHMP4A-203ENST00000527154 MRPL50Q8N5N7 158 aaKnown RBP20.25■□□□□ 0.83
CHMP4A-203ENST00000527154 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.25■□□□□ 0.83
CHMP4A-203ENST00000527154 PTPRCP08575 1304 aa20.25■□□□□ 0.83
CHMP4A-203ENST00000527154 FAM196BA6NMK8 535 aa20.24■□□□□ 0.83
CHMP4A-203ENST00000527154 USP17L5A8MUK1 530 aa20.24■□□□□ 0.83
CHMP4A-203ENST00000527154 CCND3P30281 292 aaPredicted RBP20.24■□□□□ 0.83
CHMP4A-203ENST00000527154 PICALMQ13492 652 aa20.24■□□□□ 0.83
CHMP4A-203ENST00000527154 POTEEQ6S8J3 1075 aa20.24■□□□□ 0.83
CHMP4A-203ENST00000527154 CDX2Q99626 313 aaPredicted RBP20.24■□□□□ 0.83
CHMP4A-203ENST00000527154 ZKSCAN1P17029 563 aaPredicted RBP20.23■□□□□ 0.83
CHMP4A-203ENST00000527154 MAPK4P31152 587 aa20.23■□□□□ 0.83
CHMP4A-203ENST00000527154 ZNF697Q5TEC3 545 aa20.23■□□□□ 0.83
CHMP4A-203ENST00000527154 DZIP1Q86YF9 867 aaKnown RBP20.23■□□□□ 0.83
CHMP4A-203ENST00000527154 GPRC5AQ8NFJ5 357 aa20.23■□□□□ 0.83
CHMP4A-203ENST00000527154 P2RX7Q99572 595 aaKnown RBP20.23■□□□□ 0.83
CHMP4A-203ENST00000527154 CEP126Q9P2H0 1117 aa20.23■□□□□ 0.83
CHMP4A-203ENST00000527154 RBPJLQ9UBG7 517 aa20.23■□□□□ 0.83
CHMP4A-203ENST00000527154 LTBP2Q14767 1821 aa20.23■□□□□ 0.83
CHMP4A-203ENST00000527154 FRMPD3Q5JV73 1810 aa20.23■□□□□ 0.83
CHMP4A-203ENST00000527154 ATAD5Q96QE3 1844 aa20.23■□□□□ 0.83
CHMP4A-203ENST00000527154 IGHA2P01877 340 aa20.22■□□□□ 0.83
CHMP4A-203ENST00000527154 BACE1P56817 501 aa20.22■□□□□ 0.83
CHMP4A-203ENST00000527154 HERVK_113P62684 666 aa20.22■□□□□ 0.83
CHMP4A-203ENST00000527154 HERC5Q9UII4 1024 aaKnown RBP20.22■□□□□ 0.83
CHMP4A-203ENST00000527154 PEX10O60683 326 aa20.21■□□□□ 0.83
CHMP4A-203ENST00000527154 ADORA1P30542 326 aa20.21■□□□□ 0.83
CHMP4A-203ENST00000527154 IL15P40933 162 aaPredicted RBP20.21■□□□□ 0.83
CHMP4A-203ENST00000527154 CCL14Q16627 93 aa20.21■□□□□ 0.83
CHMP4A-203ENST00000527154 Q3C1V9 767 aa20.21■□□□□ 0.83
CHMP4A-203ENST00000527154 METTL16Q86W50 562 aaKnown RBP20.21■□□□□ 0.83
CHMP4A-203ENST00000527154 FAM161BQ96MY7 647 aa20.21■□□□□ 0.83
CHMP4A-203ENST00000527154 APBA2Q99767 749 aa20.21■□□□□ 0.83
CHMP4A-203ENST00000527154 SEMA6BQ9H3T3 888 aa20.21■□□□□ 0.83
CHMP4A-203ENST00000527154 AS3MTQ9HBK9 375 aa20.21■□□□□ 0.83
CHMP4A-203ENST00000527154 RGS2P41220 211 aa20.2■□□□□ 0.82
CHMP4A-203ENST00000527154 MECOMQ03112 1051 aa20.2■□□□□ 0.82
CHMP4A-203ENST00000527154 SPTY2D1Q68D10 685 aaPredicted RBP20.2■□□□□ 0.82
CHMP4A-203ENST00000527154 GPR142Q7Z601 462 aa20.2■□□□□ 0.82
CHMP4A-203ENST00000527154 MAFAQ8NHW3 353 aaPredicted RBP20.2■□□□□ 0.82
CHMP4A-203ENST00000527154 GTF3C2Q8WUA4 911 aaPredicted RBP20.2■□□□□ 0.82
CHMP4A-203ENST00000527154 PORCNQ9H237 461 aa20.2■□□□□ 0.82
CHMP4A-203ENST00000527154 SIPA1L1O43166 1804 aa20.19■□□□□ 0.82
CHMP4A-203ENST00000527154 ERVK-9P63128 1117 aa20.19■□□□□ 0.82
CHMP4A-203ENST00000527154 ERVK-24P63145 666 aa20.19■□□□□ 0.82
CHMP4A-203ENST00000527154 IRX3P78415 501 aaPredicted RBP20.19■□□□□ 0.82
CHMP4A-203ENST00000527154 MTMR2Q13614 643 aa20.19■□□□□ 0.82
CHMP4A-203ENST00000527154 ABCF2Q9UG63 623 aa20.19■□□□□ 0.82
CHMP4A-203ENST00000527154 ZNF521Q96K83 1311 aa20.19■□□□□ 0.82
CHMP4A-203ENST00000527154 C19orf81C9J6K1 198 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms