RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 FAM129BQ96TA1 746 aa5.4□□□□□ -1.54
COPB1-205ENST00000526527 KCNK12Q9HB15 430 aa5.4□□□□□ -1.54
COPB1-205ENST00000526527 TMEM238LA0A1B0GVL6 79 aa5.39□□□□□ -1.55
COPB1-205ENST00000526527 ETV2O00321 342 aaPredicted RBP5.39□□□□□ -1.55
COPB1-205ENST00000526527 IGF2BP3O00425 579 aaKnown RBP eCLIP5.39□□□□□ -1.55
COPB1-205ENST00000526527 GADD45BO75293 160 aaPredicted RBP5.39□□□□□ -1.55
COPB1-205ENST00000526527 GLDCP23378 1020 aa5.39□□□□□ -1.55
COPB1-205ENST00000526527 GDNFP39905 211 aa5.39□□□□□ -1.55
COPB1-205ENST00000526527 PDE3BQ13370 1112 aa5.39□□□□□ -1.55
COPB1-205ENST00000526527 RPS26P11Q5JNZ5 115 aaPredicted RBP5.39□□□□□ -1.55
COPB1-205ENST00000526527 SPACA3Q8IXA5 215 aa5.39□□□□□ -1.55
COPB1-205ENST00000526527 TOP6BLQ8N6T0 577 aa5.39□□□□□ -1.55
COPB1-205ENST00000526527 PARD6AQ9NPB6 346 aa5.39□□□□□ -1.55
COPB1-205ENST00000526527 C19orf73Q9NVV2 129 aa5.39□□□□□ -1.55
COPB1-205ENST00000526527 PCDHGC5Q9Y5F6 944 aa5.39□□□□□ -1.55
COPB1-205ENST00000526527 EIF1AYO14602 144 aaKnown RBP5.38□□□□□ -1.55
COPB1-205ENST00000526527 NUAK1O60285 661 aa5.38□□□□□ -1.55
COPB1-205ENST00000526527 IGHA2P01877 340 aa5.38□□□□□ -1.55
COPB1-205ENST00000526527 GSTP1P09211 210 aaKnown RBP5.38□□□□□ -1.55
COPB1-205ENST00000526527 GRM2Q14416 872 aa5.38□□□□□ -1.55
COPB1-205ENST00000526527 NKPD1Q17RQ9 610 aa5.38□□□□□ -1.55
COPB1-205ENST00000526527 KIF4BQ2VIQ3 1234 aa5.38□□□□□ -1.55
COPB1-205ENST00000526527 KCNN1Q92952 543 aa5.38□□□□□ -1.55
COPB1-205ENST00000526527 NIF3L1Q9GZT8 377 aa5.38□□□□□ -1.55
COPB1-205ENST00000526527 DCP1AQ9NPI6 582 aaPredicted RBP5.38□□□□□ -1.55
COPB1-205ENST00000526527 GTF2IRD1Q9UHL9 959 aa5.38□□□□□ -1.55
COPB1-205ENST00000526527 GPR182O15218 404 aa5.37□□□□□ -1.55
COPB1-205ENST00000526527 HCLS1P14317 486 aaPredicted RBP5.37□□□□□ -1.55
COPB1-205ENST00000526527 RETREG2Q8NC44 543 aa5.37□□□□□ -1.55
COPB1-205ENST00000526527 EPS8L3Q8TE67 593 aaKnown RBP5.37□□□□□ -1.55
COPB1-205ENST00000526527 DNAJC25Q9H1X3 360 aa5.37□□□□□ -1.55
COPB1-205ENST00000526527 PITPNM2Q9BZ72 1349 aa5.37□□□□□ -1.55
COPB1-205ENST00000526527 LINC00310P59036 64 aa5.36□□□□□ -1.55
COPB1-205ENST00000526527 TMC1Q8TDI8 760 aa5.36□□□□□ -1.55
COPB1-205ENST00000526527 CITED4Q96RK1 184 aa5.36□□□□□ -1.55
COPB1-205ENST00000526527 IRF2BPLQ9H1B7 796 aa5.36□□□□□ -1.55
COPB1-205ENST00000526527 EPB41L4BQ9H329 900 aa5.36□□□□□ -1.55
COPB1-205ENST00000526527 CARS2Q9HA77 564 aaKnown RBP5.36□□□□□ -1.55
COPB1-205ENST00000526527 SSU72Q9NP77 194 aaKnown RBP5.36□□□□□ -1.55
COPB1-205ENST00000526527 KRT82Q9NSB4 513 aa5.36□□□□□ -1.55
COPB1-205ENST00000526527 TRAK1Q9UPV9 953 aa5.36□□□□□ -1.55
COPB1-205ENST00000526527 NEFMP07197 916 aa5.35□□□□□ -1.55
COPB1-205ENST00000526527 PDZD3Q86UT5 571 aa5.35□□□□□ -1.55
COPB1-205ENST00000526527 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.35□□□□□ -1.55
COPB1-205ENST00000526527 STK35Q8TDR2 534 aa5.35□□□□□ -1.55
COPB1-205ENST00000526527 ISL2Q96A47 359 aa5.35□□□□□ -1.55
COPB1-205ENST00000526527 ZCCHC4Q9H5U6 513 aa5.35□□□□□ -1.55
COPB1-205ENST00000526527 GPN3Q9UHW5 284 aaPredicted RBP5.35□□□□□ -1.55
COPB1-205ENST00000526527 A0A0G2JLL6 359 aaPredicted RBP5.34□□□□□ -1.55
COPB1-205ENST00000526527 SYN1P17600 705 aa5.34□□□□□ -1.55
COPB1-205ENST00000526527 BMP7P18075 431 aa5.34□□□□□ -1.55
COPB1-205ENST00000526527 CLCN7P51798 805 aa5.34□□□□□ -1.55
COPB1-205ENST00000526527 FCGRTP55899 365 aa5.34□□□□□ -1.55
COPB1-205ENST00000526527 PI16Q6UXB8 463 aa5.34□□□□□ -1.55
COPB1-205ENST00000526527 DTHD1Q6ZMT9 781 aa5.34□□□□□ -1.55
COPB1-205ENST00000526527 GGNQ86UU5 652 aa5.34□□□□□ -1.55
COPB1-205ENST00000526527 NPAS4Q8IUM7 802 aa5.34□□□□□ -1.55
COPB1-205ENST00000526527 KCNB2Q92953 911 aa5.34□□□□□ -1.55
COPB1-205ENST00000526527 SLC26A8Q96RN1 970 aa5.34□□□□□ -1.55
COPB1-205ENST00000526527 TMEM39AQ9NV64 488 aa5.34□□□□□ -1.55
COPB1-205ENST00000526527 PPP2R3AQ06190 1150 aa5.33□□□□□ -1.56
COPB1-205ENST00000526527 TRAIPQ9BWF2 469 aa5.33□□□□□ -1.56
COPB1-205ENST00000526527 SRFP11831 508 aa5.32□□□□□ -1.56
COPB1-205ENST00000526527 KRTAP10-2P60368 255 aa5.32□□□□□ -1.56
COPB1-205ENST00000526527 ZC3H12AQ5D1E8 599 aaKnown RBP5.32□□□□□ -1.56
COPB1-205ENST00000526527 TXNDC2Q86VQ3 553 aa5.32□□□□□ -1.56
COPB1-205ENST00000526527 SULF2Q8IWU5 870 aa5.32□□□□□ -1.56
COPB1-205ENST00000526527 RNF214Q8ND24 703 aa5.32□□□□□ -1.56
COPB1-205ENST00000526527 ABHD4Q8TB40 342 aa5.32□□□□□ -1.56
COPB1-205ENST00000526527 ALKBH8Q96BT7 664 aaKnown RBP5.32□□□□□ -1.56
COPB1-205ENST00000526527 CCDC120Q96HB5 630 aa5.32□□□□□ -1.56
COPB1-205ENST00000526527 PRDM10Q9NQV6 1147 aa5.32□□□□□ -1.56
COPB1-205ENST00000526527 SEMA3GQ9NS98 782 aa5.32□□□□□ -1.56
COPB1-205ENST00000526527 GNAT3A8MTJ3 354 aa5.31□□□□□ -1.56
COPB1-205ENST00000526527 BRD1O95696 1058 aa5.31□□□□□ -1.56
COPB1-205ENST00000526527 ARNTP27540 789 aa5.31□□□□□ -1.56
COPB1-205ENST00000526527 HNRNPUQ00839 825 aaKnown RBP eCLIP5.31□□□□□ -1.56
COPB1-205ENST00000526527 NFIXQ14938 502 aa5.31□□□□□ -1.56
COPB1-205ENST00000526527 MAP1SQ66K74 1059 aaPredicted RBP5.31□□□□□ -1.56
COPB1-205ENST00000526527 DMRTB1Q96MA1 342 aa5.31□□□□□ -1.56
COPB1-205ENST00000526527 KCNC2Q96PR1 638 aa5.31□□□□□ -1.56
COPB1-205ENST00000526527 RBCK1Q9BYM8 510 aa5.31□□□□□ -1.56
COPB1-205ENST00000526527 BCO2Q9BYV7 579 aa5.31□□□□□ -1.56
COPB1-205ENST00000526527 ATP13A1Q9HD20 1204 aa5.31□□□□□ -1.56
COPB1-205ENST00000526527 ZBTB7CA1YPR0 619 aa5.3□□□□□ -1.56
COPB1-205ENST00000526527 ERVK-24P63145 666 aa5.3□□□□□ -1.56
COPB1-205ENST00000526527 KCNA1Q09470 495 aa5.3□□□□□ -1.56
COPB1-205ENST00000526527 MPRIPQ6WCQ1 1025 aa5.3□□□□□ -1.56
COPB1-205ENST00000526527 GPBAR1Q8TDU6 330 aa5.3□□□□□ -1.56
COPB1-205ENST00000526527 HSPA12BQ96MM6 686 aa5.3□□□□□ -1.56
COPB1-205ENST00000526527 NLRP2Q9NX02 1062 aa5.3□□□□□ -1.56
COPB1-205ENST00000526527 PPP4R2Q9NY27 417 aa5.3□□□□□ -1.56
COPB1-205ENST00000526527 AKAP2Q9Y2D5 859 aa5.3□□□□□ -1.56
COPB1-205ENST00000526527 EOMESO95936 686 aa5.29□□□□□ -1.56
COPB1-205ENST00000526527 XRCC5P13010 732 aaKnown RBP5.29□□□□□ -1.56
COPB1-205ENST00000526527 NME2P22392 152 aa5.29□□□□□ -1.56
COPB1-205ENST00000526527 NFKB2Q00653 900 aa5.29□□□□□ -1.56
COPB1-205ENST00000526527 ZNF252P-AS1Q0IIN9 211 aa5.29□□□□□ -1.56
COPB1-205ENST00000526527 NXPE4Q6UWF7 544 aa5.29□□□□□ -1.56
COPB1-205ENST00000526527 UBE3DQ7Z6J8 389 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms