RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 TAOK2Q9UL54 1235 aa6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 PALD1Q9ULE6 856 aa6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 SLC4A4Q9Y6R1 1079 aa6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 AKAP11Q9UKA4 1901 aa6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 DOCK2Q92608 1830 aa6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 THSD7BQ9C0I4 1608 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 GPAA1O43292 621 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 ALDH1A1P00352 501 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 SLC3A2P08195 630 aaKnown RBP6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 CETPP11597 493 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 INPP5BP32019 993 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 CTCFP49711 727 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 GTF2A2P52657 109 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 PPATQ06203 517 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 PPIL2Q13356 520 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 SNAPC2Q13487 334 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 SLC4A8Q2Y0W8 1093 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 ERICH6BQ5W0A0 696 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 GIMAP6Q6P9H5 292 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 SH3BP5LQ7L8J4 393 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 PLEKHM2Q8IWE5 1019 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 SDR42E1Q8WUS8 393 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 ZKSCAN4Q969J2 545 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 TBC1D2Q9BYX2 928 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 EHD4Q9H223 541 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 AS3MTQ9HBK9 375 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 ZNF287Q9HBT7 754 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 GINM1Q9NU53 330 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 WBP1LQ9NX94 342 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 SAGE1Q9NXZ1 904 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 SWAP70Q9UH65 585 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 SERPINB13Q9UIV8 391 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 ZNF112Q9UJU3 913 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 SNCAIPQ9Y6H5 919 aa6.47□□□□□ -1.37
HMGB1P40-201ENST00000525121 CCL15-CCL14A0A0B4J2E2 113 aa6.46□□□□□ -1.38
HMGB1P40-201ENST00000525121 FAM196BA6NMK8 535 aa6.46□□□□□ -1.38
HMGB1P40-201ENST00000525121 ASNSP08243 561 aa6.46□□□□□ -1.38
HMGB1P40-201ENST00000525121 MAP3K10Q02779 954 aa6.46□□□□□ -1.38
HMGB1P40-201ENST00000525121 CCL15Q16663 113 aa6.46□□□□□ -1.38
HMGB1P40-201ENST00000525121 ZMYM1Q5SVZ6 1142 aa6.46□□□□□ -1.38
HMGB1P40-201ENST00000525121 RUFY2Q8WXA3 655 aa6.46□□□□□ -1.38
HMGB1P40-201ENST00000525121 OSBP2Q969R2 916 aa6.46□□□□□ -1.38
HMGB1P40-201ENST00000525121 STRBPQ96SI9 672 aaKnown RBP6.46□□□□□ -1.38
HMGB1P40-201ENST00000525121 PUS7LQ9H0K6 701 aaKnown RBP6.46□□□□□ -1.38
HMGB1P40-201ENST00000525121 NAPBQ9H115 298 aa6.46□□□□□ -1.38
HMGB1P40-201ENST00000525121 CABP5Q9NP86 173 aa6.46□□□□□ -1.38
HMGB1P40-201ENST00000525121 DCP1AQ9NPI6 582 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P40-201ENST00000525121 HELLSQ9NRZ9 838 aa6.46□□□□□ -1.38
HMGB1P40-201ENST00000525121 USP17L5A8MUK1 530 aa6.45□□□□□ -1.38
HMGB1P40-201ENST00000525121 PHF20L1A8MW92 1017 aa6.45□□□□□ -1.38
HMGB1P40-201ENST00000525121 USP17L12C9JPN9 530 aa6.45□□□□□ -1.38
HMGB1P40-201ENST00000525121 USP17L21D6R901 530 aa6.45□□□□□ -1.38
HMGB1P40-201ENST00000525121 M0R2C6 588 aa6.45□□□□□ -1.38
HMGB1P40-201ENST00000525121 MPHOSPH10O00566 681 aaKnown RBP6.45□□□□□ -1.38
HMGB1P40-201ENST00000525121 PRKAB2O43741 272 aa6.45□□□□□ -1.38
HMGB1P40-201ENST00000525121 PTPRAP18433 802 aa6.45□□□□□ -1.38
HMGB1P40-201ENST00000525121 CAP2P40123 477 aa6.45□□□□□ -1.38
HMGB1P40-201ENST00000525121 TM4SF4P48230 202 aa6.45□□□□□ -1.38
HMGB1P40-201ENST00000525121 ABCB5Q2M3G0 1257 aa6.45□□□□□ -1.38
HMGB1P40-201ENST00000525121 SLFNL1Q499Z3 407 aa6.45□□□□□ -1.38
HMGB1P40-201ENST00000525121 CERKLQ49MI3 558 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P40-201ENST00000525121 MCMDC2Q4G0Z9 681 aa6.45□□□□□ -1.38
HMGB1P40-201ENST00000525121 TTC22Q5TAA0 569 aa6.45□□□□□ -1.38
HMGB1P40-201ENST00000525121 CASC1Q6TDU7 716 aa6.45□□□□□ -1.38
HMGB1P40-201ENST00000525121 FASTKD5Q7L8L6 764 aaKnown RBP6.45□□□□□ -1.38
HMGB1P40-201ENST00000525121 FEZ1Q99689 392 aa6.45□□□□□ -1.38
HMGB1P40-201ENST00000525121 ZHX2Q9Y6X8 837 aa6.45□□□□□ -1.38
HMGB1P40-201ENST00000525121 POLR2AP24928 1970 aaKnown RBP6.45□□□□□ -1.38
HMGB1P40-201ENST00000525121 TRIM75PA6NK02 468 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 GSG1L2A8MUP6 293 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 MINDY4BA8MYZ0 360 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 PATL2C9JE40 543 aaKnown RBP6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 CXCL11O14625 94 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 IRF6O14896 467 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 FOXN1O15353 648 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 TRPA1O75762 1119 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 GDF11O95390 407 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 GH2P01242 217 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 CHGBP05060 677 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 SDSP20132 328 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 PDE4AP27815 886 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 GJA5P36382 358 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 PLCD1P51178 756 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 NMIQ13287 307 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 PABPC4Q13310 644 aaKnown RBP eCLIP6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 RAB3GAP1Q15042 981 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 SBK1Q52WX2 424 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 C12orf60Q5U649 245 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 GADL1Q6ZQY3 521 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 METTL16Q86W50 562 aaKnown RBP6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 IFNL1Q8IU54 200 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 ZNF280CQ8ND82 737 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 CNKSR2Q8WXI2 1034 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 CCDC17Q96LX7 622 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 ZIC5Q96T25 663 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 SH2D4AQ9H788 454 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 MKNK2Q9HBH9 465 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 ZFYVE28Q9HCC9 887 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 ZCCHC17Q9NP64 241 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms