RNA–Protein interactions for RNA: ENST00000522887.1

EIF3E-216, Transcript of eukaryotic translation initiation factor 3 subunit E, human

TSL 4

Gene EIF3E, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3E-216	ENST00000522887	CABP4	P57796	275 aa		8.71	□□□□□ -1.02
EIF3E-216	ENST00000522887	ATP11A	P98196	1134 aa		8.71	□□□□□ -1.02
EIF3E-216	ENST00000522887	EAPP	Q56P03	285 aa	Predicted RBP	8.71	□□□□□ -1.02
EIF3E-216	ENST00000522887	CEP135	Q66GS9	1140 aa		8.71	□□□□□ -1.02
EIF3E-216	ENST00000522887	CCNJL	Q8IV13	435 aa		8.71	□□□□□ -1.02
EIF3E-216	ENST00000522887	NGDN	Q8NEJ9	315 aa	Known RBP	8.71	□□□□□ -1.02
EIF3E-216	ENST00000522887	BSND	Q8WZ55	320 aa		8.71	□□□□□ -1.02
EIF3E-216	ENST00000522887	NXPE3	Q969Y0	559 aa		8.71	□□□□□ -1.02
EIF3E-216	ENST00000522887	PLVAP	Q9BX97	442 aa		8.71	□□□□□ -1.02
EIF3E-216	ENST00000522887	BCL11A	Q9H165	835 aa		8.71	□□□□□ -1.02
EIF3E-216	ENST00000522887	PPP4R2	Q9NY27	417 aa		8.71	□□□□□ -1.02
EIF3E-216	ENST00000522887	ABCC11	Q96J66	1382 aa		8.71	□□□□□ -1.02
EIF3E-216	ENST00000522887	YTHDC2	Q9H6S0	1430 aa	Known RBP	8.71	□□□□□ -1.02
EIF3E-216	ENST00000522887		A0A1W2PP55	124 aa		8.7	□□□□□ -1.02
EIF3E-216	ENST00000522887	PRPF40A	O75400	957 aa	Known RBP	8.7	□□□□□ -1.02
EIF3E-216	ENST00000522887	P4HB	P07237	508 aa	Known RBP	8.7	□□□□□ -1.02
EIF3E-216	ENST00000522887	ELN	P15502	786 aa		8.7	□□□□□ -1.02
EIF3E-216	ENST00000522887	FAM117B	Q6P1L5	589 aa		8.7	□□□□□ -1.02
EIF3E-216	ENST00000522887	NACC1	Q96RE7	527 aa		8.7	□□□□□ -1.02
EIF3E-216	ENST00000522887	GOLGA2P5	Q9HBQ8	144 aa		8.7	□□□□□ -1.02
EIF3E-216	ENST00000522887	PPME1	Q9Y570	386 aa		8.7	□□□□□ -1.02
EIF3E-216	ENST00000522887	PTCH1	Q13635	1447 aa		8.7	□□□□□ -1.02
EIF3E-216	ENST00000522887	SPATA31E1	Q6ZUB1	1445 aa		8.7	□□□□□ -1.02
EIF3E-216	ENST00000522887	MAPK8	P45983	427 aa		8.69	□□□□□ -1.02
EIF3E-216	ENST00000522887	RBM6	P78332	1123 aa	Known RBP	8.69	□□□□□ -1.02
EIF3E-216	ENST00000522887	TRIM28	Q13263	835 aa	Known RBP	8.69	□□□□□ -1.02
EIF3E-216	ENST00000522887	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	8.69	□□□□□ -1.02
EIF3E-216	ENST00000522887	IL22RA1	Q8N6P7	574 aa		8.69	□□□□□ -1.02
EIF3E-216	ENST00000522887	POP1	Q99575	1024 aa	Known RBP	8.69	□□□□□ -1.02
EIF3E-216	ENST00000522887	LIN7B	Q9HAP6	207 aa		8.69	□□□□□ -1.02
EIF3E-216	ENST00000522887	NPHS2	Q9NP85	383 aa		8.69	□□□□□ -1.02
EIF3E-216	ENST00000522887	TRIM33	Q9UPN9	1127 aa		8.69	□□□□□ -1.02
EIF3E-216	ENST00000522887	SPG7	Q9UQ90	795 aa		8.69	□□□□□ -1.02
EIF3E-216	ENST00000522887	PNPLA6	Q8IY17	1366 aa		8.69	□□□□□ -1.02
EIF3E-216	ENST00000522887	NRXN3	Q9Y4C0	1643 aa		8.69	□□□□□ -1.02
EIF3E-216	ENST00000522887	LDHB	P07195	334 aa	Known RBP	8.68	□□□□□ -1.02
EIF3E-216	ENST00000522887	TRIM26	Q12899	539 aa	Predicted RBP	8.68	□□□□□ -1.02
EIF3E-216	ENST00000522887	TRAPPC3L	Q5T215	181 aa		8.68	□□□□□ -1.02
EIF3E-216	ENST00000522887	USPL1	Q5W0Q7	1092 aa		8.68	□□□□□ -1.02
EIF3E-216	ENST00000522887	SOX17	Q9H6I2	414 aa	Predicted RBP	8.68	□□□□□ -1.02
EIF3E-216	ENST00000522887	TRPC5	Q9UL62	973 aa	Predicted RBP	8.68	□□□□□ -1.02
EIF3E-216	ENST00000522887	SOX13	Q9UN79	622 aa		8.68	□□□□□ -1.02
EIF3E-216	ENST00000522887		A0A0A0MRY4	1105 aa		8.67	□□□□□ -1.02
EIF3E-216	ENST00000522887		H3BRJ5	948 aa		8.67	□□□□□ -1.02
EIF3E-216	ENST00000522887	LRP6	O75581	1613 aa		8.67	□□□□□ -1.02
EIF3E-216	ENST00000522887	PIK3C2G	O75747	1445 aa		8.67	□□□□□ -1.02
EIF3E-216	ENST00000522887	GPRASP1	Q5JY77	1395 aa		8.67	□□□□□ -1.02
EIF3E-216	ENST00000522887	GDF6	Q6KF10	455 aa	Predicted RBP	8.67	□□□□□ -1.02
EIF3E-216	ENST00000522887	C8orf86	Q6ZUL3	223 aa		8.67	□□□□□ -1.02
EIF3E-216	ENST00000522887	FBXO11	Q86XK2	927 aa		8.67	□□□□□ -1.02
EIF3E-216	ENST00000522887	KLHL23	Q8NBE8	558 aa		8.67	□□□□□ -1.02
EIF3E-216	ENST00000522887	ANKRD24	Q8TF21	1146 aa		8.67	□□□□□ -1.02
EIF3E-216	ENST00000522887	SIN3A	Q96ST3	1273 aa		8.67	□□□□□ -1.02
EIF3E-216	ENST00000522887	TCF12	Q99081	682 aa		8.67	□□□□□ -1.02
EIF3E-216	ENST00000522887	EHD4	Q9H223	541 aa		8.67	□□□□□ -1.02
EIF3E-216	ENST00000522887	OSGEP	Q9NPF4	335 aa		8.67	□□□□□ -1.02
EIF3E-216	ENST00000522887	GADD45B	O75293	160 aa	Predicted RBP	8.66	□□□□□ -1.02
EIF3E-216	ENST00000522887	POLR3D	P05423	398 aa	Predicted RBP	8.66	□□□□□ -1.02
EIF3E-216	ENST00000522887	ITPKA	P23677	461 aa		8.66	□□□□□ -1.02
EIF3E-216	ENST00000522887	MFAP1	P55081	439 aa	Known RBP	8.66	□□□□□ -1.02
EIF3E-216	ENST00000522887	NUTM2G	Q5VZR2	741 aa		8.66	□□□□□ -1.02
EIF3E-216	ENST00000522887	FBXO33	Q7Z6M2	555 aa		8.66	□□□□□ -1.02
EIF3E-216	ENST00000522887	FMR1NB	Q8N0W7	255 aa	Predicted RBP	8.66	□□□□□ -1.02
EIF3E-216	ENST00000522887	CDK19	Q9BWU1	502 aa		8.66	□□□□□ -1.02
EIF3E-216	ENST00000522887	KRTAP9-9	Q9BYP9	154 aa		8.66	□□□□□ -1.02
EIF3E-216	ENST00000522887	KRTAP9-4	Q9BYQ2	154 aa		8.66	□□□□□ -1.02
EIF3E-216	ENST00000522887	XRN1	Q8IZH2	1706 aa	Known RBP	8.66	□□□□□ -1.02
EIF3E-216	ENST00000522887	COL16A1	Q07092	1604 aa	Predicted RBP	8.65	□□□□□ -1.02
EIF3E-216	ENST00000522887	AHDC1	Q5TGY3	1603 aa	Predicted RBP	8.65	□□□□□ -1.02
EIF3E-216	ENST00000522887	APBA3	O96018	575 aa		8.65	□□□□□ -1.02
EIF3E-216	ENST00000522887	RSPO4	Q2I0M5	234 aa	Predicted RBP	8.65	□□□□□ -1.02
EIF3E-216	ENST00000522887	LATS2	Q9NRM7	1088 aa		8.65	□□□□□ -1.02
EIF3E-216	ENST00000522887	SPATA31A3	Q5VYP0	1347 aa		8.64	□□□□□ -1.03
EIF3E-216	ENST00000522887	GNA15	P30679	374 aa		8.64	□□□□□ -1.03
EIF3E-216	ENST00000522887	ARL4D	P49703	201 aa		8.64	□□□□□ -1.03
EIF3E-216	ENST00000522887	NRG1	Q02297	640 aa	Predicted RBP	8.64	□□□□□ -1.03
EIF3E-216	ENST00000522887	DMRTC2	Q8IXT2	367 aa	Predicted RBP	8.64	□□□□□ -1.03
EIF3E-216	ENST00000522887	DDX54	Q8TDD1	881 aa	Known RBP	8.64	□□□□□ -1.03
EIF3E-216	ENST00000522887	CLEC4M	Q9H2X3	399 aa	Predicted RBP	8.64	□□□□□ -1.03
EIF3E-216	ENST00000522887	PPM1H	Q9ULR3	514 aa		8.64	□□□□□ -1.03
EIF3E-216	ENST00000522887	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	8.64	□□□□□ -1.03
EIF3E-216	ENST00000522887		A0A096LPE4	126 aa		8.63	□□□□□ -1.03
EIF3E-216	ENST00000522887	TMEM238L	A0A1B0GVL6	79 aa		8.63	□□□□□ -1.03
EIF3E-216	ENST00000522887		A0A1W2PPZ6	126 aa		8.63	□□□□□ -1.03
EIF3E-216	ENST00000522887	ACPP	P15309	386 aa		8.63	□□□□□ -1.03
EIF3E-216	ENST00000522887	GSTT1	P30711	240 aa		8.63	□□□□□ -1.03
EIF3E-216	ENST00000522887	EVA1C	P58658	441 aa		8.63	□□□□□ -1.03
EIF3E-216	ENST00000522887	GRM2	Q14416	872 aa		8.63	□□□□□ -1.03
EIF3E-216	ENST00000522887	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	8.63	□□□□□ -1.03
EIF3E-216	ENST00000522887	EPS8L3	Q8TE67	593 aa	Known RBP	8.63	□□□□□ -1.03
EIF3E-216	ENST00000522887	LACRT	Q9GZZ8	138 aa		8.63	□□□□□ -1.03
EIF3E-216	ENST00000522887	ABCB6	Q9NP58	842 aa		8.63	□□□□□ -1.03
EIF3E-216	ENST00000522887	PPL	O60437	1756 aa		8.63	□□□□□ -1.03
EIF3E-216	ENST00000522887	EIF3A	Q14152	1382 aa	Known RBP	8.62	□□□□□ -1.03
EIF3E-216	ENST00000522887	C9orf172	C9J069	976 aa		8.62	□□□□□ -1.03
EIF3E-216	ENST00000522887	DLL1	O00548	723 aa		8.62	□□□□□ -1.03
EIF3E-216	ENST00000522887	DYRK3	O43781	588 aa		8.62	□□□□□ -1.03
EIF3E-216	ENST00000522887	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	8.62	□□□□□ -1.03
EIF3E-216	ENST00000522887	IGF2-AS	Q6U949	168 aa		8.62	□□□□□ -1.03
EIF3E-216	ENST00000522887	FOXD4L3	Q6VB84	417 aa	Predicted RBP	8.62	□□□□□ -1.03

Retrieved 100 of 20,778 RNA–protein pairs in 276.6 ms