RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 AKAP2Q9Y2D5 859 aa6.81□□□□□ -1.32
HDAC2-208ENST00000520746 CSADQ9Y600 493 aa6.81□□□□□ -1.32
HDAC2-208ENST00000520746 TSPAN15O95858 294 aa6.8□□□□□ -1.32
HDAC2-208ENST00000520746 CFPP27918 469 aa6.8□□□□□ -1.32
HDAC2-208ENST00000520746 CLCN7P51798 805 aa6.8□□□□□ -1.32
HDAC2-208ENST00000520746 TXNDC2Q86VQ3 553 aa6.8□□□□□ -1.32
HDAC2-208ENST00000520746 C1QL4Q86Z23 238 aa6.8□□□□□ -1.32
HDAC2-208ENST00000520746 TOX2Q96NM4 488 aa6.8□□□□□ -1.32
HDAC2-208ENST00000520746 RBCK1Q9BYM8 510 aa6.8□□□□□ -1.32
HDAC2-208ENST00000520746 KRTAP4-11Q9BYQ6 195 aa6.8□□□□□ -1.32
HDAC2-208ENST00000520746 CBX8Q9HC52 389 aa6.8□□□□□ -1.32
HDAC2-208ENST00000520746 PPP4R2Q9NY27 417 aa6.8□□□□□ -1.32
HDAC2-208ENST00000520746 DCDC2CA8MYV0 355 aa6.79□□□□□ -1.32
HDAC2-208ENST00000520746 EOMESO95936 686 aa6.79□□□□□ -1.32
HDAC2-208ENST00000520746 AFMP43652 599 aa6.79□□□□□ -1.32
HDAC2-208ENST00000520746 RING1Q06587 406 aa6.79□□□□□ -1.32
HDAC2-208ENST00000520746 GNAT3A8MTJ3 354 aa6.78□□□□□ -1.32
HDAC2-208ENST00000520746 GLI1P08151 1106 aa6.78□□□□□ -1.32
HDAC2-208ENST00000520746 PDIA4P13667 645 aaKnown RBP6.78□□□□□ -1.32
HDAC2-208ENST00000520746 ZBTB37Q5TC79 503 aa6.78□□□□□ -1.32
HDAC2-208ENST00000520746 NXPE4Q6UWF7 544 aa6.78□□□□□ -1.32
HDAC2-208ENST00000520746 PRR23BQ6ZRT6 265 aa6.78□□□□□ -1.32
HDAC2-208ENST00000520746 LCNL1Q6ZST4 164 aa6.78□□□□□ -1.32
HDAC2-208ENST00000520746 C3orf58Q8NDZ4 430 aa6.78□□□□□ -1.32
HDAC2-208ENST00000520746 GRIN3AQ8TCU5 1115 aa6.78□□□□□ -1.32
HDAC2-208ENST00000520746 NECAB3Q96P71 396 aaPredicted RBP6.78□□□□□ -1.32
HDAC2-208ENST00000520746 PPP1R16BQ96T49 567 aa6.78□□□□□ -1.32
HDAC2-208ENST00000520746 LMCD1Q9NZU5 365 aa6.78□□□□□ -1.32
HDAC2-208ENST00000520746 ZNF865P0CJ78 1059 aaPredicted RBP6.77□□□□□ -1.33
HDAC2-208ENST00000520746 BMP6P22004 513 aa6.77□□□□□ -1.33
HDAC2-208ENST00000520746 SYDE1Q6ZW31 735 aaPredicted RBP6.77□□□□□ -1.33
HDAC2-208ENST00000520746 C12orf40Q86WS4 652 aa6.77□□□□□ -1.33
HDAC2-208ENST00000520746 FOXQ1Q9C009 403 aa6.77□□□□□ -1.33
HDAC2-208ENST00000520746 CARS2Q9HA77 564 aaKnown RBP6.77□□□□□ -1.33
HDAC2-208ENST00000520746 PRDM5Q9NQX1 630 aaPredicted RBP6.77□□□□□ -1.33
HDAC2-208ENST00000520746 PICK1Q9NRD5 415 aa6.77□□□□□ -1.33
HDAC2-208ENST00000520746 C19orf73Q9NVV2 129 aa6.77□□□□□ -1.33
HDAC2-208ENST00000520746 MAPK8IP1Q9UQF2 711 aa6.77□□□□□ -1.33
HDAC2-208ENST00000520746 ENC1O14682 589 aa6.76□□□□□ -1.33
HDAC2-208ENST00000520746 FANCGO15287 622 aa6.76□□□□□ -1.33
HDAC2-208ENST00000520746 PAGE1O75459 146 aa6.76□□□□□ -1.33
HDAC2-208ENST00000520746 TRIM37O94972 964 aa6.76□□□□□ -1.33
HDAC2-208ENST00000520746 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.76□□□□□ -1.33
HDAC2-208ENST00000520746 ARMCX6Q7L4S7 300 aa6.76□□□□□ -1.33
HDAC2-208ENST00000520746 CYFIP1Q7L576 1253 aa6.76□□□□□ -1.33
HDAC2-208ENST00000520746 TMC7Q7Z402 723 aa6.76□□□□□ -1.33
HDAC2-208ENST00000520746 LRRC56Q8IYG6 542 aaPredicted RBP6.76□□□□□ -1.33
HDAC2-208ENST00000520746 KIRREL1Q96J84 757 aa6.76□□□□□ -1.33
HDAC2-208ENST00000520746 SEMA3GQ9NS98 782 aa6.76□□□□□ -1.33
HDAC2-208ENST00000520746 PRR33A8MZF0 331 aa6.75□□□□□ -1.33
HDAC2-208ENST00000520746 KRT1P04264 644 aa6.75□□□□□ -1.33
HDAC2-208ENST00000520746 RASIP1Q5U651 963 aa6.75□□□□□ -1.33
HDAC2-208ENST00000520746 MPZL3Q6UWV2 235 aa6.75□□□□□ -1.33
HDAC2-208ENST00000520746 TPTE2Q6XPS3 522 aa6.75□□□□□ -1.33
HDAC2-208ENST00000520746 TRAIPQ9BWF2 469 aa6.75□□□□□ -1.33
HDAC2-208ENST00000520746 ATP13A1Q9HD20 1204 aa6.75□□□□□ -1.33
HDAC2-208ENST00000520746 TMEM67Q5HYA8 995 aa6.74□□□□□ -1.33
HDAC2-208ENST00000520746 CDC37L1Q7L3B6 337 aa6.74□□□□□ -1.33
HDAC2-208ENST00000520746 ZSCAN18Q8TBC5 510 aaPredicted RBP6.74□□□□□ -1.33
HDAC2-208ENST00000520746 HSPA12BQ96MM6 686 aa6.74□□□□□ -1.33
HDAC2-208ENST00000520746 CNTNAP4Q9C0A0 1308 aa6.74□□□□□ -1.33
HDAC2-208ENST00000520746 PNMA6FA0A0J9YX94 578 aa6.73□□□□□ -1.33
HDAC2-208ENST00000520746 FBXO24O75426 580 aa6.73□□□□□ -1.33
HDAC2-208ENST00000520746 SLITRK5O94991 958 aa6.73□□□□□ -1.33
HDAC2-208ENST00000520746 C1QTNF9P0C862 333 aa6.73□□□□□ -1.33
HDAC2-208ENST00000520746 LLGL2Q6P1M3 1020 aa6.73□□□□□ -1.33
HDAC2-208ENST00000520746 C22orf34Q6ZV56 151 aa6.73□□□□□ -1.33
HDAC2-208ENST00000520746 ANKLE2Q86XL3 938 aa6.73□□□□□ -1.33
HDAC2-208ENST00000520746 KCT2Q8NC54 265 aa6.73□□□□□ -1.33
HDAC2-208ENST00000520746 PCDHA4Q9UN74 947 aa6.73□□□□□ -1.33
HDAC2-208ENST00000520746 LRIG2O94898 1065 aa6.72□□□□□ -1.33
HDAC2-208ENST00000520746 ZSCAN22P10073 491 aaPredicted RBP6.72□□□□□ -1.33
HDAC2-208ENST00000520746 GDNFP39905 211 aa6.72□□□□□ -1.33
HDAC2-208ENST00000520746 DSC3Q14574 896 aa6.72□□□□□ -1.33
HDAC2-208ENST00000520746 ENOX2Q16206 610 aaKnown RBP6.72□□□□□ -1.33
HDAC2-208ENST00000520746 CDKAL1Q5VV42 579 aa6.72□□□□□ -1.33
HDAC2-208ENST00000520746 SIAH1Q8IUQ4 282 aa6.72□□□□□ -1.33
HDAC2-208ENST00000520746 MFSD4AQ8N468 514 aa6.72□□□□□ -1.33
HDAC2-208ENST00000520746 CCER1Q8TC90 406 aaPredicted RBP6.72□□□□□ -1.33
HDAC2-208ENST00000520746 CEP44Q9C0F1 390 aa6.72□□□□□ -1.33
HDAC2-208ENST00000520746 FBRSQ9HAH7 460 aa6.72□□□□□ -1.33
HDAC2-208ENST00000520746 SAMM50Q9Y512 469 aa6.72□□□□□ -1.33
HDAC2-208ENST00000520746 FAM155AB1AL88 458 aaPredicted RBP6.71□□□□□ -1.34
HDAC2-208ENST00000520746 GSTT1P30711 240 aa6.71□□□□□ -1.34
HDAC2-208ENST00000520746 NPAS4Q8IUM7 802 aa6.71□□□□□ -1.34
HDAC2-208ENST00000520746 FBXO15Q8NCQ5 510 aaPredicted RBP6.71□□□□□ -1.34
HDAC2-208ENST00000520746 ELMO3Q96BJ8 720 aa6.71□□□□□ -1.34
HDAC2-208ENST00000520746 NSUN3Q9H649 340 aaKnown RBP6.71□□□□□ -1.34
HDAC2-208ENST00000520746 PPM1HQ9ULR3 514 aa6.71□□□□□ -1.34
HDAC2-208ENST00000520746 ST14Q9Y5Y6 855 aa6.71□□□□□ -1.34
HDAC2-208ENST00000520746 SOWAHDA6NJG2 315 aa6.7□□□□□ -1.34
HDAC2-208ENST00000520746 H3BS24 57 aa6.7□□□□□ -1.34
HDAC2-208ENST00000520746 FGD1P98174 961 aa6.7□□□□□ -1.34
HDAC2-208ENST00000520746 SLBPQ14493 270 aaKnown RBP eCLIP6.7□□□□□ -1.34
HDAC2-208ENST00000520746 INPP5AQ14642 412 aa6.7□□□□□ -1.34
HDAC2-208ENST00000520746 LRRC14Q15048 493 aa6.7□□□□□ -1.34
HDAC2-208ENST00000520746 SFRP5Q5T4F7 317 aa6.7□□□□□ -1.34
HDAC2-208ENST00000520746 LILRA6Q6PI73 481 aa6.7□□□□□ -1.34
HDAC2-208ENST00000520746 LRFN4Q6PJG9 635 aa6.7□□□□□ -1.34
HDAC2-208ENST00000520746 AEBP1Q8IUX7 1158 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms