RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 MANSC4A6NHS7 340 aaPredicted RBP11.59□□□□□ -0.55
CTNNA1-221ENST00000520339 HOXA2O43364 376 aa11.59□□□□□ -0.55
CTNNA1-221ENST00000520339 INHBEP58166 350 aa11.59□□□□□ -0.55
CTNNA1-221ENST00000520339 HDLBPQ00341 1268 aaKnown RBP11.59□□□□□ -0.55
CTNNA1-221ENST00000520339 MLLT1Q03111 559 aaPredicted RBP11.59□□□□□ -0.55
CTNNA1-221ENST00000520339 PUM3Q15397 648 aaKnown RBP11.59□□□□□ -0.55
CTNNA1-221ENST00000520339 WNK4Q96J92 1243 aa11.59□□□□□ -0.55
CTNNA1-221ENST00000520339 KIF16BQ96L93 1317 aa11.59□□□□□ -0.55
CTNNA1-221ENST00000520339 CACNA1FO60840 1977 aa11.58□□□□□ -0.56
CTNNA1-221ENST00000520339 FRAT2O75474 233 aaPredicted RBP11.58□□□□□ -0.56
CTNNA1-221ENST00000520339 AP1G2O75843 785 aa11.58□□□□□ -0.56
CTNNA1-221ENST00000520339 IFIT1P09914 478 aaKnown RBP11.58□□□□□ -0.56
CTNNA1-221ENST00000520339 ZBTB48P10074 688 aaPredicted RBP11.58□□□□□ -0.56
CTNNA1-221ENST00000520339 FDX1P10109 184 aa11.58□□□□□ -0.56
CTNNA1-221ENST00000520339 IREB2P48200 963 aaKnown RBP11.58□□□□□ -0.56
CTNNA1-221ENST00000520339 TNFAIP1Q13829 316 aa11.58□□□□□ -0.56
CTNNA1-221ENST00000520339 PKN2Q16513 984 aaKnown RBP11.58□□□□□ -0.56
CTNNA1-221ENST00000520339 ATG9AQ7Z3C6 839 aa11.58□□□□□ -0.56
CTNNA1-221ENST00000520339 CDAN1Q8IWY9 1227 aa11.58□□□□□ -0.56
CTNNA1-221ENST00000520339 SLF2Q8IX21 1173 aa11.58□□□□□ -0.56
CTNNA1-221ENST00000520339 API5Q9BZZ5 524 aaKnown RBP11.58□□□□□ -0.56
CTNNA1-221ENST00000520339 NBPF3Q9H094 633 aa11.58□□□□□ -0.56
CTNNA1-221ENST00000520339 SUGT1Q9Y2Z0 365 aa11.58□□□□□ -0.56
CTNNA1-221ENST00000520339 TCP10L2B9ZVM9 353 aa11.57□□□□□ -0.56
CTNNA1-221ENST00000520339 RNF40O75150 1001 aa11.57□□□□□ -0.56
CTNNA1-221ENST00000520339 ALDH1A1P00352 501 aa11.57□□□□□ -0.56
CTNNA1-221ENST00000520339 UBTFL1P0CB47 393 aaPredicted RBP11.57□□□□□ -0.56
CTNNA1-221ENST00000520339 APOBEC3HQ6NTF7 200 aaKnown RBP11.57□□□□□ -0.56
CTNNA1-221ENST00000520339 ANKRD13AQ8IZ07 590 aa11.57□□□□□ -0.56
CTNNA1-221ENST00000520339 LPIN2Q92539 896 aa11.57□□□□□ -0.56
CTNNA1-221ENST00000520339 ZDHHC15Q96MV8 337 aa11.57□□□□□ -0.56
CTNNA1-221ENST00000520339 HPS5Q9UPZ3 1129 aa11.57□□□□□ -0.56
CTNNA1-221ENST00000520339 ZNF646O15015 1829 aaPredicted RBP11.57□□□□□ -0.56
CTNNA1-221ENST00000520339 CASP8AP2Q9UKL3 1982 aa11.57□□□□□ -0.56
CTNNA1-221ENST00000520339 IGF2BP3O00425 579 aaKnown RBP eCLIP11.56□□□□□ -0.56
CTNNA1-221ENST00000520339 FKTNO75072 461 aa11.56□□□□□ -0.56
CTNNA1-221ENST00000520339 CIAO1O76071 339 aa11.56□□□□□ -0.56
CTNNA1-221ENST00000520339 SLC5A1P13866 664 aa11.56□□□□□ -0.56
CTNNA1-221ENST00000520339 RARSP54136 660 aaKnown RBP11.56□□□□□ -0.56
CTNNA1-221ENST00000520339 GUCA2AQ02747 115 aa11.56□□□□□ -0.56
CTNNA1-221ENST00000520339 PRPF38BQ5VTL8 546 aaKnown RBP11.56□□□□□ -0.56
CTNNA1-221ENST00000520339 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.56□□□□□ -0.56
CTNNA1-221ENST00000520339 LAPTM4BQ86VI4 370 aa11.56□□□□□ -0.56
CTNNA1-221ENST00000520339 HLA-CQ95604 372 aa11.56□□□□□ -0.56
CTNNA1-221ENST00000520339 TEKT1Q969V4 418 aa11.56□□□□□ -0.56
CTNNA1-221ENST00000520339 TMEM39BQ9GZU3 492 aa11.56□□□□□ -0.56
CTNNA1-221ENST00000520339 COG6Q9Y2V7 657 aa11.56□□□□□ -0.56
CTNNA1-221ENST00000520339 TNNI2P48788 182 aa11.55□□□□□ -0.56
CTNNA1-221ENST00000520339 CACNB3P54284 484 aa11.55□□□□□ -0.56
CTNNA1-221ENST00000520339 FKBP1CQ5VVH2 108 aa11.55□□□□□ -0.56
CTNNA1-221ENST00000520339 HHIPL2Q6UWX4 724 aa11.55□□□□□ -0.56
CTNNA1-221ENST00000520339 ARHGAP45Q92619 1136 aa11.55□□□□□ -0.56
CTNNA1-221ENST00000520339 HS3ST6Q96QI5 342 aa11.55□□□□□ -0.56
CTNNA1-221ENST00000520339 PTPN18Q99952 460 aa11.55□□□□□ -0.56
CTNNA1-221ENST00000520339 CEP126Q9P2H0 1117 aa11.55□□□□□ -0.56
CTNNA1-221ENST00000520339 HDAC5Q9UQL6 1122 aa11.55□□□□□ -0.56
CTNNA1-221ENST00000520339 LRRFIP2Q9Y608 721 aaKnown RBP11.55□□□□□ -0.56
CTNNA1-221ENST00000520339 SPEF2Q9C093 1822 aa11.55□□□□□ -0.56
CTNNA1-221ENST00000520339 SOX10P56693 466 aa11.54□□□□□ -0.56
CTNNA1-221ENST00000520339 FBXO46Q6PJ61 603 aaPredicted RBP11.54□□□□□ -0.56
CTNNA1-221ENST00000520339 FAM83AQ86UY5 434 aa11.54□□□□□ -0.56
CTNNA1-221ENST00000520339 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.54□□□□□ -0.56
CTNNA1-221ENST00000520339 WDR66Q8TBY9 1149 aa11.54□□□□□ -0.56
CTNNA1-221ENST00000520339 OPTNQ96CV9 577 aa11.54□□□□□ -0.56
CTNNA1-221ENST00000520339 MEIS3Q99687 375 aa11.54□□□□□ -0.56
CTNNA1-221ENST00000520339 SIL1Q9H173 461 aa11.54□□□□□ -0.56
CTNNA1-221ENST00000520339 ELP3Q9H9T3 547 aa11.54□□□□□ -0.56
CTNNA1-221ENST00000520339 COPRSQ9NQ92 184 aa11.54□□□□□ -0.56
CTNNA1-221ENST00000520339 PCDHGC3Q9UN70 934 aa11.54□□□□□ -0.56
CTNNA1-221ENST00000520339 POTEB3A0JP26 581 aa11.53□□□□□ -0.56
CTNNA1-221ENST00000520339 BHMG1C9JSJ3 638 aaPredicted RBP11.53□□□□□ -0.56
CTNNA1-221ENST00000520339 CFHP08603 1231 aa11.53□□□□□ -0.56
CTNNA1-221ENST00000520339 IL15P40933 162 aaPredicted RBP11.53□□□□□ -0.56
CTNNA1-221ENST00000520339 VGLL4Q14135 290 aa11.53□□□□□ -0.56
CTNNA1-221ENST00000520339 ATP2B3Q16720 1220 aa11.53□□□□□ -0.56
CTNNA1-221ENST00000520339 INTS3Q68E01 1043 aaKnown RBP11.53□□□□□ -0.56
CTNNA1-221ENST00000520339 OTUD7BQ6GQQ9 843 aa11.53□□□□□ -0.56
CTNNA1-221ENST00000520339 POTEBQ6S5H4 581 aa11.53□□□□□ -0.56
CTNNA1-221ENST00000520339 ZFRQ96KR1 1074 aaKnown RBP11.53□□□□□ -0.56
CTNNA1-221ENST00000520339 PA2G4Q9UQ80 394 aaKnown RBP11.53□□□□□ -0.56
CTNNA1-221ENST00000520339 MAST3O60307 1309 aa11.53□□□□□ -0.56
CTNNA1-221ENST00000520339 TK2O00142 265 aa11.52□□□□□ -0.57
CTNNA1-221ENST00000520339 PHKA1P46020 1223 aa11.52□□□□□ -0.57
CTNNA1-221ENST00000520339 FUT2Q10981 343 aa11.52□□□□□ -0.57
CTNNA1-221ENST00000520339 CRHR2Q13324 411 aa11.52□□□□□ -0.57
CTNNA1-221ENST00000520339 BRI3BPQ8WY22 251 aa11.52□□□□□ -0.57
CTNNA1-221ENST00000520339 GNL3LQ9NVN8 582 aaKnown RBP11.52□□□□□ -0.57
CTNNA1-221ENST00000520339 TMOD2Q9NZR1 351 aa11.52□□□□□ -0.57
CTNNA1-221ENST00000520339 PRDX5P30044 214 aa11.51□□□□□ -0.57
CTNNA1-221ENST00000520339 ADORA1P30542 326 aa11.51□□□□□ -0.57
CTNNA1-221ENST00000520339 CDC42EP5Q6NZY7 148 aa11.51□□□□□ -0.57
CTNNA1-221ENST00000520339 DENND2AQ9ULE3 1009 aa11.51□□□□□ -0.57
CTNNA1-221ENST00000520339 DAGLAQ9Y4D2 1042 aa11.51□□□□□ -0.57
CTNNA1-221ENST00000520339 CSADQ9Y600 493 aa11.51□□□□□ -0.57
CTNNA1-221ENST00000520339 SALL1Q9NSC2 1324 aa11.51□□□□□ -0.57
CTNNA1-221ENST00000520339 IPO8O15397 1037 aaKnown RBP11.5□□□□□ -0.57
CTNNA1-221ENST00000520339 GNAI3P08754 354 aa11.5□□□□□ -0.57
CTNNA1-221ENST00000520339 GTF2A2P52657 109 aa11.5□□□□□ -0.57
CTNNA1-221ENST00000520339 TIMM10P62072 90 aa11.5□□□□□ -0.57
CTNNA1-221ENST00000520339 MTX1Q13505 466 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms