RNA–Protein interactions for RNA: ENST00000518279.5

TNPO1-211, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-211ENST00000518279 TNPO2O14787 897 aaKnown RBP20.79■□□□□ 0.92
TNPO1-211ENST00000518279 SRGAP3O43295 1099 aa20.79■□□□□ 0.92
TNPO1-211ENST00000518279 SPTY2D1Q68D10 685 aaPredicted RBP20.79■□□□□ 0.92
TNPO1-211ENST00000518279 PI16Q6UXB8 463 aa20.79■□□□□ 0.92
TNPO1-211ENST00000518279 TMEM57Q8N5G2 664 aa20.79■□□□□ 0.92
TNPO1-211ENST00000518279 PXYLP1Q8TE99 480 aa20.79■□□□□ 0.92
TNPO1-211ENST00000518279 AGTPBP1Q9UPW5 1226 aa20.79■□□□□ 0.92
TNPO1-211ENST00000518279 ZBTB7BO15156 539 aaPredicted RBP20.78■□□□□ 0.92
TNPO1-211ENST00000518279 TBC1D12O60347 775 aa20.78■□□□□ 0.92
TNPO1-211ENST00000518279 IRF5Q13568 498 aa20.78■□□□□ 0.92
TNPO1-211ENST00000518279 ERICH6Q7L0X2 663 aa20.78■□□□□ 0.92
TNPO1-211ENST00000518279 ANKRD13CQ8N6S4 541 aa20.78■□□□□ 0.92
TNPO1-211ENST00000518279 HMG20BQ9P0W2 317 aa20.78■□□□□ 0.92
TNPO1-211ENST00000518279 GNAI2P04899 355 aa20.77■□□□□ 0.92
TNPO1-211ENST00000518279 RRP1BQ14684 758 aaKnown RBP20.77■□□□□ 0.92
TNPO1-211ENST00000518279 MVPQ14764 893 aaKnown RBP20.77■□□□□ 0.92
TNPO1-211ENST00000518279 TBC1D9Q6ZT07 1266 aa20.77■□□□□ 0.92
TNPO1-211ENST00000518279 NSUN4Q96CB9 384 aaKnown RBP20.77■□□□□ 0.92
TNPO1-211ENST00000518279 DEFB118Q96PH6 123 aa20.77■□□□□ 0.92
TNPO1-211ENST00000518279 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.77■□□□□ 0.92
TNPO1-211ENST00000518279 AKAP2Q9Y2D5 859 aa20.77■□□□□ 0.92
TNPO1-211ENST00000518279 TFRCP02786 760 aaKnown RBP20.76■□□□□ 0.91
TNPO1-211ENST00000518279 NEUROD6Q96NK8 337 aa20.76■□□□□ 0.91
TNPO1-211ENST00000518279 PAK6Q9NQU5 681 aaPredicted RBP20.76■□□□□ 0.91
TNPO1-211ENST00000518279 TAOK2Q9UL54 1235 aa20.76■□□□□ 0.91
TNPO1-211ENST00000518279 NR2E3Q9Y5X4 410 aa20.76■□□□□ 0.91
TNPO1-211ENST00000518279 LOC285556D6RIA3 1793 aa20.75■□□□□ 0.91
TNPO1-211ENST00000518279 PNMA6EA0A0J9YXQ4 647 aa20.75■□□□□ 0.91
TNPO1-211ENST00000518279 NPM3O75607 178 aaKnown RBP20.75■□□□□ 0.91
TNPO1-211ENST00000518279 SPP2Q13103 211 aa20.75■□□□□ 0.91
TNPO1-211ENST00000518279 FAM110CQ1W6H9 321 aa20.75■□□□□ 0.91
TNPO1-211ENST00000518279 SPATA5Q8NB90 893 aa20.75■□□□□ 0.91
TNPO1-211ENST00000518279 ATAD5Q96QE3 1844 aa20.74■□□□□ 0.91
TNPO1-211ENST00000518279 PROCA1Q8NCQ7 364 aaPredicted RBP20.74■□□□□ 0.91
TNPO1-211ENST00000518279 COA7Q96BR5 231 aa20.74■□□□□ 0.91
TNPO1-211ENST00000518279 CRISPLD2Q9H0B8 497 aa20.74■□□□□ 0.91
TNPO1-211ENST00000518279 OSBPL5Q9H0X9 879 aaPredicted RBP20.74■□□□□ 0.91
TNPO1-211ENST00000518279 ALPK3Q96L96 1907 aa20.73■□□□□ 0.91
TNPO1-211ENST00000518279 RLBP1P12271 317 aa20.73■□□□□ 0.91
TNPO1-211ENST00000518279 HMGCS2P54868 508 aa20.73■□□□□ 0.91
TNPO1-211ENST00000518279 ZNF280CQ8ND82 737 aa20.73■□□□□ 0.91
TNPO1-211ENST00000518279 PNMA3Q9UL41 463 aa20.73■□□□□ 0.91
TNPO1-211ENST00000518279 COL2A1P02458 1487 aaPredicted RBP20.73■□□□□ 0.91
TNPO1-211ENST00000518279 EVI5O60447 810 aa20.72■□□□□ 0.91
TNPO1-211ENST00000518279 ARID4AP29374 1257 aaPredicted RBP20.72■□□□□ 0.91
TNPO1-211ENST00000518279 CAP2P40123 477 aa20.72■□□□□ 0.91
TNPO1-211ENST00000518279 DIS3LQ8TF46 1054 aaKnown RBP20.72■□□□□ 0.91
TNPO1-211ENST00000518279 PAWRQ96IZ0 340 aaKnown RBP20.72■□□□□ 0.91
TNPO1-211ENST00000518279 RAI14Q9P0K7 980 aa20.72■□□□□ 0.91
TNPO1-211ENST00000518279 LDHCP07864 332 aa20.71■□□□□ 0.91
TNPO1-211ENST00000518279 MCAMP43121 646 aa20.71■□□□□ 0.91
TNPO1-211ENST00000518279 GSTO1P78417 241 aa20.71■□□□□ 0.91
TNPO1-211ENST00000518279 ASCC2Q9H1I8 757 aaPredicted RBP20.71■□□□□ 0.91
TNPO1-211ENST00000518279 SIPA1L1O43166 1804 aa20.7■□□□□ 0.9
TNPO1-211ENST00000518279 SOX1O00570 391 aaPredicted RBP20.7■□□□□ 0.9
TNPO1-211ENST00000518279 MAP4K4O95819 1239 aaPredicted RBP20.7■□□□□ 0.9
TNPO1-211ENST00000518279 TRIM32Q13049 653 aa20.7■□□□□ 0.9
TNPO1-211ENST00000518279 GORABQ5T7V8 394 aa20.7■□□□□ 0.9
TNPO1-211ENST00000518279 FTSJ3Q8IY81 847 aaKnown RBP20.7■□□□□ 0.9
TNPO1-211ENST00000518279 TEX11Q8IYF3 940 aa20.7■□□□□ 0.9
TNPO1-211ENST00000518279 SH3RF3Q8TEJ3 882 aaPredicted RBP20.7■□□□□ 0.9
TNPO1-211ENST00000518279 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.7■□□□□ 0.92e-7■■■■□ 22.2
TNPO1-211ENST00000518279 GJD2Q9UKL4 321 aa20.7■□□□□ 0.9
TNPO1-211ENST00000518279 USP17L5A8MUK1 530 aa20.69■□□□□ 0.9
TNPO1-211ENST00000518279 GCLCP48506 637 aaPredicted RBP20.69■□□□□ 0.9
TNPO1-211ENST00000518279 JAG1P78504 1218 aa20.69■□□□□ 0.9
TNPO1-211ENST00000518279 POLA2Q14181 598 aa20.69■□□□□ 0.9
TNPO1-211ENST00000518279 SH3D19Q5HYK7 790 aa20.69■□□□□ 0.9
TNPO1-211ENST00000518279 STAP2Q9UGK3 403 aa20.69■□□□□ 0.9
TNPO1-211ENST00000518279 PLXNB2O15031 1838 aa20.69■□□□□ 0.9
TNPO1-211ENST00000518279 DNAH12Q6ZR08 3092 aa20.68■□□□□ 0.9
TNPO1-211ENST00000518279 PEX10O60683 326 aa20.68■□□□□ 0.9
TNPO1-211ENST00000518279 HMGCRP04035 888 aa20.68■□□□□ 0.9
TNPO1-211ENST00000518279 CAPN2P17655 700 aa20.68■□□□□ 0.9
TNPO1-211ENST00000518279 ITPRIPQ8IWB1 547 aa20.68■□□□□ 0.9
TNPO1-211ENST00000518279 ATP8B2P98198 1209 aa20.67■□□□□ 0.9
TNPO1-211ENST00000518279 PABPC4Q13310 644 aaKnown RBP eCLIP20.67■□□□□ 0.9
TNPO1-211ENST00000518279 SHROOM1Q2M3G4 852 aaPredicted RBP20.67■□□□□ 0.9
TNPO1-211ENST00000518279 NECAB2Q7Z6G3 386 aa20.67■□□□□ 0.9
TNPO1-211ENST00000518279 SSH3Q8TE77 659 aa20.67■□□□□ 0.9
TNPO1-211ENST00000518279 TBC1D2Q9BYX2 928 aa20.67■□□□□ 0.9
TNPO1-211ENST00000518279 C1orf115Q9H7X2 142 aa20.67■□□□□ 0.9
TNPO1-211ENST00000518279 SNRKQ9NRH2 765 aa20.67■□□□□ 0.9
TNPO1-211ENST00000518279 LRP2BPQ9P2M1 347 aa20.67■□□□□ 0.9
TNPO1-211ENST00000518279 HERC5Q9UII4 1024 aaKnown RBP20.67■□□□□ 0.9
TNPO1-211ENST00000518279 MNX1P50219 401 aaPredicted RBP20.66■□□□□ 0.9
TNPO1-211ENST00000518279 G3BP1Q13283 466 aaKnown RBP eCLIP20.66■□□□□ 0.9
TNPO1-211ENST00000518279 LRCH3Q96II8 777 aa20.66■□□□□ 0.9
TNPO1-211ENST00000518279 DNAJC18Q9H819 358 aa20.66■□□□□ 0.9
TNPO1-211ENST00000518279 AATFQ9NY61 560 aaKnown RBP eCLIP20.66■□□□□ 0.9
TNPO1-211ENST00000518279 PI4KBQ9UBF8 816 aa20.66■□□□□ 0.9
TNPO1-211ENST00000518279 MORF4L1Q9UBU8 362 aa20.66■□□□□ 0.9
TNPO1-211ENST00000518279 LAMA2P24043 3122 aaKnown RBP20.66■□□□□ 0.9
TNPO1-211ENST00000518279 A0A1W2PPC1 479 aa20.65■□□□□ 0.9
TNPO1-211ENST00000518279 UQCRFS1P1P0C7P4 283 aa20.65■□□□□ 0.9
TNPO1-211ENST00000518279 MTMR2Q13614 643 aa20.65■□□□□ 0.9
TNPO1-211ENST00000518279 ADGRA1Q86SQ6 560 aa20.65■□□□□ 0.9
TNPO1-211ENST00000518279 TRIB2Q92519 343 aa20.65■□□□□ 0.9
TNPO1-211ENST00000518279 WDR18Q9BV38 432 aa20.65■□□□□ 0.9
TNPO1-211ENST00000518279 AS3MTQ9HBK9 375 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms