RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 ZBTB22O15209 634 aa18.78■□□□□ 0.6
CSGALNACT1-204ENST00000517494 TBC1D12O60347 775 aa18.78■□□□□ 0.6
CSGALNACT1-204ENST00000517494 TEX11Q8IYF3 940 aa18.78■□□□□ 0.6
CSGALNACT1-204ENST00000517494 TRMT2AQ8IZ69 625 aaKnown RBP18.78■□□□□ 0.6
CSGALNACT1-204ENST00000517494 PROCA1Q8NCQ7 364 aaPredicted RBP18.78■□□□□ 0.6
CSGALNACT1-204ENST00000517494 ZNF280CQ8ND82 737 aa18.78■□□□□ 0.6
CSGALNACT1-204ENST00000517494 NSUN4Q96CB9 384 aaKnown RBP18.78■□□□□ 0.6
CSGALNACT1-204ENST00000517494 NOL10Q9BSC4 688 aaKnown RBP18.78■□□□□ 0.6
CSGALNACT1-204ENST00000517494 OSBPL5Q9H0X9 879 aaPredicted RBP18.78■□□□□ 0.6
CSGALNACT1-204ENST00000517494 LRP2BPQ9P2M1 347 aa18.78■□□□□ 0.6
CSGALNACT1-204ENST00000517494 MGAMO43451 1857 aa18.77■□□□□ 0.6
CSGALNACT1-204ENST00000517494 RARSP54136 660 aaKnown RBP18.77■□□□□ 0.6
CSGALNACT1-204ENST00000517494 PABPC4Q13310 644 aaKnown RBP eCLIP18.77■□□□□ 0.6
CSGALNACT1-204ENST00000517494 PAWRQ96IZ0 340 aaKnown RBP18.77■□□□□ 0.6
CSGALNACT1-204ENST00000517494 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.77■□□□□ 0.6
CSGALNACT1-204ENST00000517494 SZT2Q5T011 3432 aa18.77■□□□□ 0.59
CSGALNACT1-204ENST00000517494 GCLCP48506 637 aaPredicted RBP18.76■□□□□ 0.59
CSGALNACT1-204ENST00000517494 G3BP1Q13283 466 aaKnown RBP eCLIP18.76■□□□□ 0.59
CSGALNACT1-204ENST00000517494 SH3RF3Q8TEJ3 882 aaPredicted RBP18.76■□□□□ 0.59
CSGALNACT1-204ENST00000517494 DIS3LQ8TF46 1054 aaKnown RBP18.76■□□□□ 0.59
CSGALNACT1-204ENST00000517494 PAK6Q9NQU5 681 aaPredicted RBP18.76■□□□□ 0.59
CSGALNACT1-204ENST00000517494 USP17L5A8MUK1 530 aa18.75■□□□□ 0.59
CSGALNACT1-204ENST00000517494 NPM3O75607 178 aaKnown RBP18.75■□□□□ 0.59
CSGALNACT1-204ENST00000517494 HMGCRP04035 888 aa18.75■□□□□ 0.59
CSGALNACT1-204ENST00000517494 CAP2P40123 477 aa18.75■□□□□ 0.59
CSGALNACT1-204ENST00000517494 RRP1BQ14684 758 aaKnown RBP18.75■□□□□ 0.59
CSGALNACT1-204ENST00000517494 ASCC2Q9H1I8 757 aaPredicted RBP18.75■□□□□ 0.59
CSGALNACT1-204ENST00000517494 AS3MTQ9HBK9 375 aa18.75■□□□□ 0.59
CSGALNACT1-204ENST00000517494 MAP4K4O95819 1239 aaPredicted RBP18.74■□□□□ 0.59
CSGALNACT1-204ENST00000517494 GNAI2P04899 355 aa18.74■□□□□ 0.59
CSGALNACT1-204ENST00000517494 ARID4AP29374 1257 aaPredicted RBP18.74■□□□□ 0.59
CSGALNACT1-204ENST00000517494 MCAMP43121 646 aa18.74■□□□□ 0.59
CSGALNACT1-204ENST00000517494 IRX3P78415 501 aaPredicted RBP18.74■□□□□ 0.59
CSGALNACT1-204ENST00000517494 MTX1Q13505 466 aa18.74■□□□□ 0.59
CSGALNACT1-204ENST00000517494 MTMR2Q13614 643 aa18.74■□□□□ 0.59
CSGALNACT1-204ENST00000517494 NECAB2Q7Z6G3 386 aa18.74■□□□□ 0.59
CSGALNACT1-204ENST00000517494 C7orf61Q8IZ16 206 aa18.74■□□□□ 0.59
CSGALNACT1-204ENST00000517494 FRAT1Q92837 279 aaPredicted RBP18.74■□□□□ 0.59
CSGALNACT1-204ENST00000517494 TRIM34Q9BYJ4 488 aa18.74■□□□□ 0.59
CSGALNACT1-204ENST00000517494 PRO3102Q9H379 93 aa18.74■□□□□ 0.59
CSGALNACT1-204ENST00000517494 SNRKQ9NRH2 765 aa18.74■□□□□ 0.59
CSGALNACT1-204ENST00000517494 AATFQ9NY61 560 aaKnown RBP eCLIP18.74■□□□□ 0.59
CSGALNACT1-204ENST00000517494 STAP2Q9UGK3 403 aa18.74■□□□□ 0.59
CSGALNACT1-204ENST00000517494 PTPRFP10586 1907 aa18.73■□□□□ 0.59
CSGALNACT1-204ENST00000517494 PHIPQ8WWQ0 1821 aa18.73■□□□□ 0.59
CSGALNACT1-204ENST00000517494 UQCRFS1P1P0C7P4 283 aa18.73■□□□□ 0.59
CSGALNACT1-204ENST00000517494 TRIM32Q13049 653 aa18.73■□□□□ 0.59
CSGALNACT1-204ENST00000517494 NAA16Q6N069 864 aaPredicted RBP18.73■□□□□ 0.59
CSGALNACT1-204ENST00000517494 ARHGAP45Q92619 1136 aa18.73■□□□□ 0.59
CSGALNACT1-204ENST00000517494 TBC1D2Q9BYX2 928 aa18.73■□□□□ 0.59
CSGALNACT1-204ENST00000517494 CRISPLD2Q9H0B8 497 aa18.73■□□□□ 0.59
CSGALNACT1-204ENST00000517494 TMOD4Q9NZQ9 345 aa18.73■□□□□ 0.59
CSGALNACT1-204ENST00000517494 HERC5Q9UII4 1024 aaKnown RBP18.73■□□□□ 0.59
CSGALNACT1-204ENST00000517494 COL2A1P02458 1487 aaPredicted RBP18.72■□□□□ 0.59
CSGALNACT1-204ENST00000517494 PNMA6EA0A0J9YXQ4 647 aa18.72■□□□□ 0.59
CSGALNACT1-204ENST00000517494 OS9Q13438 667 aaPredicted RBP18.72■□□□□ 0.59
CSGALNACT1-204ENST00000517494 TTC39AQ5SRH9 613 aa18.72■□□□□ 0.59
CSGALNACT1-204ENST00000517494 MAPKAPK5Q8IW41 473 aa18.72■□□□□ 0.59
CSGALNACT1-204ENST00000517494 CRACR2BQ8N4Y2 399 aaPredicted RBP18.72■□□□□ 0.59
CSGALNACT1-204ENST00000517494 CLUAP1Q96AJ1 413 aa18.72■□□□□ 0.59
CSGALNACT1-204ENST00000517494 HMX1Q9NP08 348 aaPredicted RBP18.72■□□□□ 0.59
CSGALNACT1-204ENST00000517494 ZMYND8Q9ULU4 1186 aaPredicted RBP18.72■□□□□ 0.59
CSGALNACT1-204ENST00000517494 TNNQ9UQP3 1299 aa18.72■□□□□ 0.59
CSGALNACT1-204ENST00000517494 PEX10O60683 326 aa18.71■□□□□ 0.59
CSGALNACT1-204ENST00000517494 BAG3O95817 575 aa18.71■□□□□ 0.59
CSGALNACT1-204ENST00000517494 CAPN2P17655 700 aa18.71■□□□□ 0.59
CSGALNACT1-204ENST00000517494 CYP2B6P20813 491 aa18.71■□□□□ 0.59
CSGALNACT1-204ENST00000517494 TGFBRAP1Q8WUH2 860 aa18.71■□□□□ 0.59
CSGALNACT1-204ENST00000517494 PI4KBQ9UBF8 816 aa18.71■□□□□ 0.59
CSGALNACT1-204ENST00000517494 SOX1O00570 391 aaPredicted RBP18.7■□□□□ 0.58
CSGALNACT1-204ENST00000517494 IPO8O15397 1037 aaKnown RBP18.7■□□□□ 0.58
CSGALNACT1-204ENST00000517494 GDF11O95390 407 aa18.7■□□□□ 0.58
CSGALNACT1-204ENST00000517494 TRIM27P14373 513 aa18.7■□□□□ 0.58
CSGALNACT1-204ENST00000517494 LRCH3Q96II8 777 aa18.7■□□□□ 0.58
CSGALNACT1-204ENST00000517494 DHX36Q9H2U1 1008 aaKnown RBP18.7■□□□□ 0.58
CSGALNACT1-204ENST00000517494 RPTORQ8N122 1335 aa18.7■□□□□ 0.58
CSGALNACT1-204ENST00000517494 A0A1W2PPC1 479 aa18.69■□□□□ 0.58
CSGALNACT1-204ENST00000517494 ASNSP08243 561 aa18.69■□□□□ 0.58
CSGALNACT1-204ENST00000517494 PLCG2P16885 1265 aa18.69■□□□□ 0.58
CSGALNACT1-204ENST00000517494 BACE1P56817 501 aa18.69■□□□□ 0.58
CSGALNACT1-204ENST00000517494 SHROOM1Q2M3G4 852 aaPredicted RBP18.69■□□□□ 0.58
CSGALNACT1-204ENST00000517494 SH3D19Q5HYK7 790 aa18.69■□□□□ 0.58
CSGALNACT1-204ENST00000517494 CCAR1Q8IX12 1150 aaKnown RBP18.69■□□□□ 0.58
CSGALNACT1-204ENST00000517494 TRIB2Q92519 343 aa18.69■□□□□ 0.58
CSGALNACT1-204ENST00000517494 SAP30BPQ9UHR5 308 aaKnown RBP18.69■□□□□ 0.58
CSGALNACT1-204ENST00000517494 GJD2Q9UKL4 321 aa18.69■□□□□ 0.58
CSGALNACT1-204ENST00000517494 FLT1P17948 1338 aa18.69■□□□□ 0.58
CSGALNACT1-204ENST00000517494 LOC285556D6RIA3 1793 aa18.68■□□□□ 0.58
CSGALNACT1-204ENST00000517494 SYN1P17600 705 aa18.68■□□□□ 0.58
CSGALNACT1-204ENST00000517494 PDE3AQ14432 1141 aa18.68■□□□□ 0.58
CSGALNACT1-204ENST00000517494 CCDC158Q5M9N0 1113 aa18.68■□□□□ 0.58
CSGALNACT1-204ENST00000517494 ATF7IPQ6VMQ6 1270 aa18.68■□□□□ 0.58
CSGALNACT1-204ENST00000517494 ANKLE1Q8NAG6 615 aa18.68■□□□□ 0.58
CSGALNACT1-204ENST00000517494 P2RX7Q99572 595 aaKnown RBP18.68■□□□□ 0.58
CSGALNACT1-204ENST00000517494 WDR18Q9BV38 432 aa18.68■□□□□ 0.58
CSGALNACT1-204ENST00000517494 NBPF3Q9H094 633 aa18.68■□□□□ 0.58
CSGALNACT1-204ENST00000517494 C11orf49Q9H6J7 331 aa18.68■□□□□ 0.58
CSGALNACT1-204ENST00000517494 CWC22Q9HCG8 908 aaKnown RBP18.68■□□□□ 0.58
CSGALNACT1-204ENST00000517494 MORF4L1Q9UBU8 362 aa18.68■□□□□ 0.58
CSGALNACT1-204ENST00000517494 PALD1Q9ULE6 856 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms