RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 ATP1A2P50993 1020 aa7.15□□□□□ -1.26
SCARNA6.1-201ENST00000516989 EIF6P56537 245 aaKnown RBP7.15□□□□□ -1.26
SCARNA6.1-201ENST00000516989 KIAA2012Q0VF49 1180 aa7.15□□□□□ -1.26
SCARNA6.1-201ENST00000516989 UBE4AQ14139 1066 aa7.15□□□□□ -1.26
SCARNA6.1-201ENST00000516989 THSD4Q6ZMP0 1018 aa7.15□□□□□ -1.26
SCARNA6.1-201ENST00000516989 ATG9AQ7Z3C6 839 aa7.15□□□□□ -1.26
SCARNA6.1-201ENST00000516989 SIRT2Q8IXJ6 389 aa7.15□□□□□ -1.26
SCARNA6.1-201ENST00000516989 NIM1KQ8IY84 436 aa7.15□□□□□ -1.26
SCARNA6.1-201ENST00000516989 VPS33BQ9H267 617 aa7.15□□□□□ -1.26
SCARNA6.1-201ENST00000516989 DBNDD1Q9H9R9 158 aa7.15□□□□□ -1.26
SCARNA6.1-201ENST00000516989 DOLKQ9UPQ8 538 aa7.15□□□□□ -1.26
SCARNA6.1-201ENST00000516989 LTBP3Q9NS15 1303 aa7.15□□□□□ -1.26
SCARNA6.1-201ENST00000516989 CEP350Q5VT06 3117 aa7.14□□□□□ -1.27
SCARNA6.1-201ENST00000516989 IFIT1P09914 478 aaKnown RBP7.14□□□□□ -1.27
SCARNA6.1-201ENST00000516989 LAMB2P55268 1798 aa7.14□□□□□ -1.27
SCARNA6.1-201ENST00000516989 TIMM10P62072 90 aa7.14□□□□□ -1.27
SCARNA6.1-201ENST00000516989 TFCP2Q12800 502 aa7.14□□□□□ -1.27
SCARNA6.1-201ENST00000516989 AGERQ15109 404 aa7.14□□□□□ -1.27
SCARNA6.1-201ENST00000516989 SWI5Q1ZZU3 235 aa7.14□□□□□ -1.27
SCARNA6.1-201ENST00000516989 OXLD1Q5BKU9 147 aa7.14□□□□□ -1.27
SCARNA6.1-201ENST00000516989 TXNRD3Q86VQ6 643 aa7.14□□□□□ -1.27
SCARNA6.1-201ENST00000516989 VPS37DQ86XT2 251 aa7.14□□□□□ -1.27
SCARNA6.1-201ENST00000516989 ZNF526Q8TF50 670 aaPredicted RBP7.14□□□□□ -1.27
SCARNA6.1-201ENST00000516989 BAP1Q92560 729 aa7.14□□□□□ -1.27
SCARNA6.1-201ENST00000516989 NEUROD6Q96NK8 337 aa7.14□□□□□ -1.27
SCARNA6.1-201ENST00000516989 ZNRF3Q9ULT6 936 aa7.14□□□□□ -1.27
SCARNA6.1-201ENST00000516989 EXOC6BQ9Y2D4 811 aa7.14□□□□□ -1.27
SCARNA6.1-201ENST00000516989 AKAP2Q9Y2D5 859 aa7.14□□□□□ -1.27
SCARNA6.1-201ENST00000516989 NOP58Q9Y2X3 529 aaKnown RBP7.14□□□□□ -1.27
SCARNA6.1-201ENST00000516989 GJA3Q9Y6H8 435 aa7.14□□□□□ -1.27
SCARNA6.1-201ENST00000516989 DLEC1Q9Y238 1755 aa7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 COL4A1P02462 1669 aa7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 ECE2O60344 883 aa7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 RAD17O75943 681 aa7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 SASH1O94885 1247 aa7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 SLC5A1P13866 664 aa7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 KLRK1P26718 216 aa7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 GYG1P46976 350 aa7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 AAMPQ13685 434 aa7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 PUM3Q15397 648 aaKnown RBP7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 ATP2B3Q16720 1220 aa7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 HSP90AB4PQ58FF6 505 aa7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 CAVIN4Q5BKX8 364 aa7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 SH3RF1Q7Z6J0 888 aa7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 VGLL2Q8N8G2 317 aa7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 LPIN2Q92539 896 aa7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 MTRQ99707 1265 aa7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 SLC6A16Q9GZN6 736 aa7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 MYH3P11055 1940 aa7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 BRCA1P38398 1863 aaKnown RBP7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 CACNA1SQ13698 1873 aa7.13□□□□□ -1.27
SCARNA6.1-201ENST00000516989 A0A1B0GUL7 405 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 FZD9O00144 591 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 RAB11FIP3O75154 756 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 FRAT2O75474 233 aaPredicted RBP7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 DDNO94850 711 aaPredicted RBP7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 DKK1O94907 266 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 NEFLP07196 543 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 HIBADHP31937 336 aaKnown RBP7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 GTF2IP78347 998 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 CXCL9Q07325 125 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 TNIP1Q15025 636 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 GORABQ5T7V8 394 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 RNF20Q5VTR2 975 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 CIAPIN1Q6FI81 312 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 NYAP1Q6ZVC0 841 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 ZNF804AQ7Z570 1209 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 PODNQ7Z5L7 613 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 BPHLQ86WA6 291 aaPredicted RBP7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 ERC1Q8IUD2 1116 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 FOXJ1Q92949 421 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 KCTD12Q96CX2 325 aaKnown RBP7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 XAGE2Q96GT9 111 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 FAM84BQ96KN1 310 aaPredicted RBP7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 COA1Q9GZY4 146 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 RWDD1Q9H446 243 aaPredicted RBP7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 DCTPP1Q9H773 170 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 CD209Q9NNX6 404 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 KCNQ5Q9NR82 932 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 KIAA1024Q9UPX6 916 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 ARFGEF1Q9Y6D6 1849 aa7.12□□□□□ -1.27
SCARNA6.1-201ENST00000516989 SNED1Q8TER0 1413 aa7.11□□□□□ -1.27
SCARNA6.1-201ENST00000516989 MED23Q9ULK4 1368 aa7.11□□□□□ -1.27
SCARNA6.1-201ENST00000516989 GLTPD2A6NH11 291 aa7.11□□□□□ -1.27
SCARNA6.1-201ENST00000516989 SOWAHDA6NJG2 315 aa7.11□□□□□ -1.27
SCARNA6.1-201ENST00000516989 YDJCA8MPS7 323 aa7.11□□□□□ -1.27
SCARNA6.1-201ENST00000516989 FGFR2P21802 821 aa7.11□□□□□ -1.27
SCARNA6.1-201ENST00000516989 ADORA1P30542 326 aa7.11□□□□□ -1.27
SCARNA6.1-201ENST00000516989 SCNN1AP37088 669 aa7.11□□□□□ -1.27
SCARNA6.1-201ENST00000516989 SERPINB4P48594 390 aa7.11□□□□□ -1.27
SCARNA6.1-201ENST00000516989 SEC13P55735 322 aa7.11□□□□□ -1.27
SCARNA6.1-201ENST00000516989 LINC01559Q495D7 138 aa7.11□□□□□ -1.27
SCARNA6.1-201ENST00000516989 LCE2DQ5TA82 110 aaPredicted RBP7.11□□□□□ -1.27
SCARNA6.1-201ENST00000516989 CCDC102BQ68D86 513 aa7.11□□□□□ -1.27
SCARNA6.1-201ENST00000516989 TTLL5Q6EMB2 1281 aa7.11□□□□□ -1.27
SCARNA6.1-201ENST00000516989 C15orf52Q6ZUT6 534 aaKnown RBP7.11□□□□□ -1.27
SCARNA6.1-201ENST00000516989 FBXO33Q7Z6M2 555 aa7.11□□□□□ -1.27
SCARNA6.1-201ENST00000516989 SIX5Q8N196 739 aa7.11□□□□□ -1.27
SCARNA6.1-201ENST00000516989 CLASRPQ8N2M8 674 aaKnown RBP7.11□□□□□ -1.27
SCARNA6.1-201ENST00000516989 RHPN1Q8TCX5 695 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms