RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 CCDC158Q5M9N0 1113 aa15□□□□□ -0.01
SNHG4-208ENST00000514110 AATFQ9NY61 560 aaKnown RBP eCLIP15□□□□□ -0.011e-323■■■■□ 24.9
SNHG4-208ENST00000514110 GABRQQ9UN88 632 aa15□□□□□ -0.01
SNHG4-208ENST00000514110 MAST2Q6P0Q8 1798 aa15□□□□□ -0.01
SNHG4-208ENST00000514110 FCGRTP55899 365 aa14.99□□□□□ -0.01
SNHG4-208ENST00000514110 TREML2Q5T2D2 321 aa14.99□□□□□ -0.01
SNHG4-208ENST00000514110 NAA16Q6N069 864 aaPredicted RBP14.99□□□□□ -0.01
SNHG4-208ENST00000514110 ADGRA1Q86SQ6 560 aa14.99□□□□□ -0.01
SNHG4-208ENST00000514110 ITPRIPQ8IWB1 547 aa14.99□□□□□ -0.01
SNHG4-208ENST00000514110 FTSJ3Q8IY81 847 aaKnown RBP14.99□□□□□ -0.01
SNHG4-208ENST00000514110 SHISA4Q96DD7 197 aa14.99□□□□□ -0.01
SNHG4-208ENST00000514110 TLR7Q9NYK1 1049 aaKnown RBP14.99□□□□□ -0.01
SNHG4-208ENST00000514110 AGTPBP1Q9UPW5 1226 aa14.99□□□□□ -0.01
SNHG4-208ENST00000514110 SIPA1L1O43166 1804 aa14.99□□□□□ -0.01
SNHG4-208ENST00000514110 ATAD5Q96QE3 1844 aa14.99□□□□□ -0.01
SNHG4-208ENST00000514110 MYO5AQ9Y4I1 1855 aaKnown RBP14.98□□□□□ -0.01
SNHG4-208ENST00000514110 CAP2P40123 477 aa14.98□□□□□ -0.01
SNHG4-208ENST00000514110 ZAP70P43403 619 aa14.98□□□□□ -0.01
SNHG4-208ENST00000514110 SPP2Q13103 211 aa14.98□□□□□ -0.01
SNHG4-208ENST00000514110 SMCR8Q8TEV9 937 aaPredicted RBP14.98□□□□□ -0.01
SNHG4-208ENST00000514110 GCC1Q96CN9 775 aa14.98□□□□□ -0.01
SNHG4-208ENST00000514110 ZNF512BQ96KM6 892 aaPredicted RBP14.98□□□□□ -0.01
SNHG4-208ENST00000514110 NOL10Q9BSC4 688 aaKnown RBP14.98□□□□□ -0.01
SNHG4-208ENST00000514110 PIH1D3Q9NQM4 214 aaKnown RBP14.98□□□□□ -0.01
SNHG4-208ENST00000514110 DBNLQ9UJU6 430 aaKnown RBP14.98□□□□□ -0.01
SNHG4-208ENST00000514110 NOP58Q9Y2X3 529 aaKnown RBP14.98□□□□□ -0.01
SNHG4-208ENST00000514110 BAG3O95817 575 aa14.97□□□□□ -0.01
SNHG4-208ENST00000514110 CCL5P13501 91 aa14.97□□□□□ -0.01
SNHG4-208ENST00000514110 PPP4CP60510 307 aa14.97□□□□□ -0.01
SNHG4-208ENST00000514110 PROCA1Q8NCQ7 364 aaPredicted RBP14.97□□□□□ -0.01
SNHG4-208ENST00000514110 ZNF280CQ8ND82 737 aa14.97□□□□□ -0.01
SNHG4-208ENST00000514110 TGFBRAP1Q8WUH2 860 aa14.97□□□□□ -0.01
SNHG4-208ENST00000514110 CCDC8Q9H0W5 538 aaPredicted RBP14.97□□□□□ -0.01
SNHG4-208ENST00000514110 HERC5Q9UII4 1024 aaKnown RBP14.97□□□□□ -0.01
SNHG4-208ENST00000514110 LOC285556D6RIA3 1793 aa14.97□□□□□ -0.01
SNHG4-208ENST00000514110 CDK5RAP2Q96SN8 1893 aa14.97□□□□□ -0.01
SNHG4-208ENST00000514110 FLT1P17948 1338 aa14.96□□□□□ -0.01
SNHG4-208ENST00000514110 FLT3LGP49771 235 aa14.96□□□□□ -0.01
SNHG4-208ENST00000514110 HMGCS2P54868 508 aa14.96□□□□□ -0.01
SNHG4-208ENST00000514110 JAG1P78504 1218 aa14.96□□□□□ -0.01
SNHG4-208ENST00000514110 HABP4Q5JVS0 413 aaKnown RBP14.96□□□□□ -0.01
SNHG4-208ENST00000514110 MAPKAPK5Q8IW41 473 aa14.96□□□□□ -0.01
SNHG4-208ENST00000514110 ANKRD13CQ8N6S4 541 aa14.96□□□□□ -0.01
SNHG4-208ENST00000514110 EAF2Q96CJ1 260 aaPredicted RBP14.96□□□□□ -0.01
SNHG4-208ENST00000514110 DHX36Q9H2U1 1008 aaKnown RBP14.96□□□□□ -0.01
SNHG4-208ENST00000514110 PI4KBQ9UBF8 816 aa14.96□□□□□ -0.01
SNHG4-208ENST00000514110 BIN2Q9UBW5 565 aaPredicted RBP14.96□□□□□ -0.01
SNHG4-208ENST00000514110 FOCADQ5VW36 1801 aa14.95□□□□□ -0.02
SNHG4-208ENST00000514110 USP17L5A8MUK1 530 aa14.95□□□□□ -0.02
SNHG4-208ENST00000514110 TNPO2O14787 897 aaKnown RBP14.95□□□□□ -0.02
SNHG4-208ENST00000514110 PLCG2P16885 1265 aa14.95□□□□□ -0.02
SNHG4-208ENST00000514110 DYNLL1P63167 89 aaKnown RBP14.95□□□□□ -0.02
SNHG4-208ENST00000514110 CEP85Q6P2H3 762 aa14.95□□□□□ -0.02
SNHG4-208ENST00000514110 SLAIN1Q8ND83 568 aa14.95□□□□□ -0.02
SNHG4-208ENST00000514110 TBC1D2Q9BYX2 928 aa14.95□□□□□ -0.02
SNHG4-208ENST00000514110 RNF208Q9H0X6 261 aa14.95□□□□□ -0.02
SNHG4-208ENST00000514110 DNAJC18Q9H819 358 aa14.95□□□□□ -0.02
SNHG4-208ENST00000514110 ADCY3O60266 1144 aa14.94□□□□□ -0.02
SNHG4-208ENST00000514110 GJB1P08034 283 aa14.94□□□□□ -0.02
SNHG4-208ENST00000514110 ELNP15502 786 aa14.94□□□□□ -0.02
SNHG4-208ENST00000514110 GJA8P48165 433 aa14.94□□□□□ -0.02
SNHG4-208ENST00000514110 UBXN2AP68543 259 aa14.94□□□□□ -0.02
SNHG4-208ENST00000514110 SHROOM1Q2M3G4 852 aaPredicted RBP14.94□□□□□ -0.02
SNHG4-208ENST00000514110 SH3D19Q5HYK7 790 aa14.94□□□□□ -0.02
SNHG4-208ENST00000514110 DIEXFQ68CQ4 756 aaKnown RBP14.94□□□□□ -0.02
SNHG4-208ENST00000514110 METTL16Q86W50 562 aaKnown RBP14.94□□□□□ -0.02
SNHG4-208ENST00000514110 PANK1Q8TE04 598 aa14.94□□□□□ -0.02
SNHG4-208ENST00000514110 UNC93B1Q9H1C4 597 aa14.94□□□□□ -0.02
SNHG4-208ENST00000514110 PCDH10Q9P2E7 1040 aa14.94□□□□□ -0.02
SNHG4-208ENST00000514110 PNMA3Q9UL41 463 aa14.94□□□□□ -0.02
SNHG4-208ENST00000514110 PALD1Q9ULE6 856 aa14.94□□□□□ -0.02
SNHG4-208ENST00000514110 NDUFB9Q9Y6M9 179 aa14.94□□□□□ -0.02
SNHG4-208ENST00000514110 CYP7A1P22680 504 aa14.93□□□□□ -0.02
SNHG4-208ENST00000514110 FAM110CQ1W6H9 321 aa14.93□□□□□ -0.02
SNHG4-208ENST00000514110 UBE2Q1Q7Z7E8 422 aa14.93□□□□□ -0.02
SNHG4-208ENST00000514110 NKX2-3Q8TAU0 364 aa14.93□□□□□ -0.02
SNHG4-208ENST00000514110 ASCC2Q9H1I8 757 aaPredicted RBP14.93□□□□□ -0.02
SNHG4-208ENST00000514110 AS3MTQ9HBK9 375 aa14.93□□□□□ -0.02
SNHG4-208ENST00000514110 SAP30BPQ9UHR5 308 aaKnown RBP14.93□□□□□ -0.02
SNHG4-208ENST00000514110 EXOC6BQ9Y2D4 811 aa14.93□□□□□ -0.02
SNHG4-208ENST00000514110 ZBED9Q6R2W3 1325 aa14.92□□□□□ -0.02
SNHG4-208ENST00000514110 IGSF3O75054 1194 aa14.92□□□□□ -0.02
SNHG4-208ENST00000514110 IDH1O75874 414 aaKnown RBP14.92□□□□□ -0.02
SNHG4-208ENST00000514110 INHAP05111 366 aa14.92□□□□□ -0.02
SNHG4-208ENST00000514110 PABPC4Q13310 644 aaKnown RBP eCLIP14.92□□□□□ -0.02
SNHG4-208ENST00000514110 IRF5Q13568 498 aa14.92□□□□□ -0.02
SNHG4-208ENST00000514110 MTMR2Q13614 643 aa14.92□□□□□ -0.02
SNHG4-208ENST00000514110 FOXP4Q8IVH2 680 aaPredicted RBP14.92□□□□□ -0.02
SNHG4-208ENST00000514110 CRACR2BQ8N4Y2 399 aaPredicted RBP14.92□□□□□ -0.02
SNHG4-208ENST00000514110 MIGA1Q8NAN2 632 aa14.92□□□□□ -0.02
SNHG4-208ENST00000514110 PXYLP1Q8TE99 480 aa14.92□□□□□ -0.02
SNHG4-208ENST00000514110 U2AF1L4Q8WU68 220 aaKnown RBP14.92□□□□□ -0.02
SNHG4-208ENST00000514110 WDR18Q9BV38 432 aa14.92□□□□□ -0.02
SNHG4-208ENST00000514110 ANTXR1Q9H6X2 564 aa14.92□□□□□ -0.02
SNHG4-208ENST00000514110 H0YGN5 161 aa14.91□□□□□ -0.02
SNHG4-208ENST00000514110 GDF11O95390 407 aa14.91□□□□□ -0.02
SNHG4-208ENST00000514110 ASNSP08243 561 aa14.91□□□□□ -0.02
SNHG4-208ENST00000514110 GCLCP48506 637 aaPredicted RBP14.91□□□□□ -0.02
SNHG4-208ENST00000514110 BACE1P56817 501 aa14.91□□□□□ -0.02
SNHG4-208ENST00000514110 MAGEB6Q8N7X4 407 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms