RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ANTXR1Q9H6X2 564 aa11.08□□□□□ -0.64
PDLIM5-209ENST00000506632 AFG3L2Q9Y4W6 797 aa11.08□□□□□ -0.64
PDLIM5-209ENST00000506632 TRIM17Q9Y577 477 aa11.08□□□□□ -0.64
PDLIM5-209ENST00000506632 NDUFB9Q9Y6M9 179 aa11.08□□□□□ -0.64
PDLIM5-209ENST00000506632 A0A0G2JLL6 359 aaPredicted RBP11.07□□□□□ -0.64
PDLIM5-209ENST00000506632 CYP7A1P22680 504 aa11.07□□□□□ -0.64
PDLIM5-209ENST00000506632 GPAT2Q6NUI2 795 aa11.07□□□□□ -0.64
PDLIM5-209ENST00000506632 PRRT2Q7Z6L0 340 aaPredicted RBP11.07□□□□□ -0.64
PDLIM5-209ENST00000506632 CLASRPQ8N2M8 674 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-209ENST00000506632 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.07□□□□□ -0.64
PDLIM5-209ENST00000506632 DHX36Q9H2U1 1008 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-209ENST00000506632 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.07□□□□□ -0.64
PDLIM5-209ENST00000506632 PICK1Q9NRD5 415 aa11.07□□□□□ -0.64
PDLIM5-209ENST00000506632 ZHX2Q9Y6X8 837 aa11.07□□□□□ -0.64
PDLIM5-209ENST00000506632 FLT1P17948 1338 aa11.07□□□□□ -0.64
PDLIM5-209ENST00000506632 FAM196BA6NMK8 535 aa11.06□□□□□ -0.64
PDLIM5-209ENST00000506632 IDH1O75874 414 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-209ENST00000506632 DYNLL1P63167 89 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-209ENST00000506632 RRP1BQ14684 758 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-209ENST00000506632 TPRNQ4KMQ1 711 aa11.06□□□□□ -0.64
PDLIM5-209ENST00000506632 C17orf99Q6UX52 265 aa11.06□□□□□ -0.64
PDLIM5-209ENST00000506632 CERS3Q8IU89 383 aa11.06□□□□□ -0.64
PDLIM5-209ENST00000506632 TGFBRAP1Q8WUH2 860 aa11.06□□□□□ -0.64
PDLIM5-209ENST00000506632 DNAJC18Q9H819 358 aa11.06□□□□□ -0.64
PDLIM5-209ENST00000506632 EFCC1Q9HA90 598 aa11.06□□□□□ -0.64
PDLIM5-209ENST00000506632 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-209ENST00000506632 PI4KBQ9UBF8 816 aa11.06□□□□□ -0.64
PDLIM5-209ENST00000506632 HERC5Q9UII4 1024 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-209ENST00000506632 PTPN22Q9Y2R2 807 aa11.06□□□□□ -0.64
PDLIM5-209ENST00000506632 ZSWIM8A7E2V4 1837 aa11.05□□□□□ -0.64
PDLIM5-209ENST00000506632 ATAD5Q96QE3 1844 aa11.05□□□□□ -0.64
PDLIM5-209ENST00000506632 APBB1O00213 710 aa11.05□□□□□ -0.64
PDLIM5-209ENST00000506632 PDHXO00330 501 aa11.05□□□□□ -0.64
PDLIM5-209ENST00000506632 IFIT2P09913 472 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-209ENST00000506632 CAP2P40123 477 aa11.05□□□□□ -0.64
PDLIM5-209ENST00000506632 SOX10P56693 466 aa11.05□□□□□ -0.64
PDLIM5-209ENST00000506632 MAP3K12Q12852 859 aa11.05□□□□□ -0.64
PDLIM5-209ENST00000506632 CCDC84Q86UT8 332 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-209ENST00000506632 MAPKAPK5Q8IW41 473 aa11.05□□□□□ -0.64
PDLIM5-209ENST00000506632 MAGEB6Q8N7X4 407 aa11.05□□□□□ -0.64
PDLIM5-209ENST00000506632 DDX60LQ5H9U9 1706 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-209ENST00000506632 LOC285556D6RIA3 1793 aa11.04□□□□□ -0.64
PDLIM5-209ENST00000506632 LACTBP83111 547 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-209ENST00000506632 MLLT1Q03111 559 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-209ENST00000506632 TTF1Q15361 905 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-209ENST00000506632 FASTKD5Q7L8L6 764 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-209ENST00000506632 FOXP4Q8IVH2 680 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-209ENST00000506632 MIGA1Q8NAN2 632 aa11.04□□□□□ -0.64
PDLIM5-209ENST00000506632 RIOK1Q9BRS2 568 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-209ENST00000506632 TBC1D2Q9BYX2 928 aa11.04□□□□□ -0.64
PDLIM5-209ENST00000506632 PALD1Q9ULE6 856 aa11.04□□□□□ -0.64
PDLIM5-209ENST00000506632 SLC45A1Q9Y2W3 748 aa11.04□□□□□ -0.64
PDLIM5-209ENST00000506632 MYH1P12882 1939 aa11.03□□□□□ -0.64
PDLIM5-209ENST00000506632 TCRBV5S4A2TA0A5A2 114 aa11.03□□□□□ -0.64
PDLIM5-209ENST00000506632 TRIM75PA6NK02 468 aa11.03□□□□□ -0.64
PDLIM5-209ENST00000506632 BCRP11274 1271 aa11.03□□□□□ -0.64
PDLIM5-209ENST00000506632 PDE6AP16499 860 aa11.03□□□□□ -0.64
PDLIM5-209ENST00000506632 ATP5JP18859 108 aa11.03□□□□□ -0.64
PDLIM5-209ENST00000506632 CTGFP29279 349 aa11.03□□□□□ -0.64
PDLIM5-209ENST00000506632 JAG1P78504 1218 aa11.03□□□□□ -0.64
PDLIM5-209ENST00000506632 BBXQ8WY36 941 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-209ENST00000506632 ARMC5Q96C12 935 aa11.03□□□□□ -0.64
PDLIM5-209ENST00000506632 PARK7Q99497 189 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-209ENST00000506632 LRRCC1Q9C099 1032 aa11.03□□□□□ -0.64
PDLIM5-209ENST00000506632 ARHGAP39Q9C0H5 1083 aa11.03□□□□□ -0.64
PDLIM5-209ENST00000506632 CPA4Q9UI42 421 aa11.03□□□□□ -0.64
PDLIM5-209ENST00000506632 HTTP42858 3142 aa11.02□□□□□ -0.64
PDLIM5-209ENST00000506632 USP17L5A8MUK1 530 aa11.02□□□□□ -0.65
PDLIM5-209ENST00000506632 GOLIM4O00461 696 aa11.02□□□□□ -0.65
PDLIM5-209ENST00000506632 GNRH1P01148 92 aa11.02□□□□□ -0.65
PDLIM5-209ENST00000506632 CYP2C8P10632 490 aa11.02□□□□□ -0.65
PDLIM5-209ENST00000506632 ARHGEF6Q15052 776 aa11.02□□□□□ -0.65
PDLIM5-209ENST00000506632 SH3D19Q5HYK7 790 aa11.02□□□□□ -0.65
PDLIM5-209ENST00000506632 SLC9C2Q5TAH2 1124 aa11.02□□□□□ -0.65
PDLIM5-209ENST00000506632 PROCA1Q8NCQ7 364 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-209ENST00000506632 ZNF280CQ8ND82 737 aa11.02□□□□□ -0.65
PDLIM5-209ENST00000506632 EDC3Q96F86 508 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-209ENST00000506632 DNAJC2Q99543 621 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-209ENST00000506632 WDR18Q9BV38 432 aa11.02□□□□□ -0.65
PDLIM5-209ENST00000506632 EHD4Q9H223 541 aa11.02□□□□□ -0.65
PDLIM5-209ENST00000506632 DCTPP1Q9H773 170 aa11.02□□□□□ -0.65
PDLIM5-209ENST00000506632 GINM1Q9NU53 330 aa11.02□□□□□ -0.65
PDLIM5-209ENST00000506632 SAP30BPQ9UHR5 308 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-209ENST00000506632 AGTPBP1Q9UPW5 1226 aa11.02□□□□□ -0.65
PDLIM5-209ENST00000506632 PTCH2Q9Y6C5 1203 aa11.02□□□□□ -0.65
PDLIM5-209ENST00000506632 RBBP6Q7Z6E9 1792 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-209ENST00000506632 KIAA0100Q14667 2235 aaKnown RBP11.01□□□□□ -0.65
PDLIM5-209ENST00000506632 PDE4DIPQ5VU43 2346 aa11.01□□□□□ -0.65
PDLIM5-209ENST00000506632 SMARCA5O60264 1052 aaPredicted RBP11.01□□□□□ -0.65
PDLIM5-209ENST00000506632 HLA-DOAP06340 250 aa11.01□□□□□ -0.65
PDLIM5-209ENST00000506632 ASNSP08243 561 aa11.01□□□□□ -0.65
PDLIM5-209ENST00000506632 RRP1P56182 461 aaKnown RBP11.01□□□□□ -0.65
PDLIM5-209ENST00000506632 SPP2Q13103 211 aa11.01□□□□□ -0.65
PDLIM5-209ENST00000506632 KIF22Q14807 665 aa11.01□□□□□ -0.65
PDLIM5-209ENST00000506632 GADL1Q6ZQY3 521 aa11.01□□□□□ -0.65
PDLIM5-209ENST00000506632 HAUS7Q99871 368 aa11.01□□□□□ -0.65
PDLIM5-209ENST00000506632 BOLA2Q9H3K6 86 aa11.01□□□□□ -0.65
PDLIM5-209ENST00000506632 PAG1Q9NWQ8 432 aa11.01□□□□□ -0.65
PDLIM5-209ENST00000506632 ZNF532Q9HCE3 1301 aa11.01□□□□□ -0.65
PDLIM5-209ENST00000506632 NAV1Q8NEY1 1877 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms