RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 NKG7Q16617 165 aa8.35□□□□□ -1.07
UBE2D3-218ENST00000505009 ARMCX6Q7L4S7 300 aa8.35□□□□□ -1.07
UBE2D3-218ENST00000505009 HDXQ7Z353 690 aa8.35□□□□□ -1.07
UBE2D3-218ENST00000505009 VSIG10LQ86VR7 867 aa8.35□□□□□ -1.07
UBE2D3-218ENST00000505009 ABI1Q8IZP0 508 aa8.35□□□□□ -1.07
UBE2D3-218ENST00000505009 HEXIM2Q96MH2 286 aaKnown RBP8.35□□□□□ -1.07
UBE2D3-218ENST00000505009 VTI1BQ9UEU0 232 aa8.35□□□□□ -1.07
UBE2D3-218ENST00000505009 LMNB1P20700 586 aa8.34□□□□□ -1.07
UBE2D3-218ENST00000505009 ZNF574Q6ZN55 896 aaPredicted RBP8.34□□□□□ -1.07
UBE2D3-218ENST00000505009 CDC37L1Q7L3B6 337 aa8.34□□□□□ -1.07
UBE2D3-218ENST00000505009 FAM214BQ7L5A3 538 aa8.34□□□□□ -1.07
UBE2D3-218ENST00000505009 WFDC3Q8IUB2 231 aa8.34□□□□□ -1.07
UBE2D3-218ENST00000505009 CRELD1Q96HD1 420 aa8.34□□□□□ -1.07
UBE2D3-218ENST00000505009 WNT10AQ9GZT5 417 aa8.34□□□□□ -1.07
UBE2D3-218ENST00000505009 PRDM10Q9NQV6 1147 aa8.34□□□□□ -1.07
UBE2D3-218ENST00000505009 GFRA2O00451 464 aa8.33□□□□□ -1.08
UBE2D3-218ENST00000505009 ITGAEP38570 1179 aa8.33□□□□□ -1.08
UBE2D3-218ENST00000505009 OXCT1P55809 520 aa8.33□□□□□ -1.08
UBE2D3-218ENST00000505009 BNIP3Q12983 259 aa8.33□□□□□ -1.08
UBE2D3-218ENST00000505009 SLBPQ14493 270 aaKnown RBP eCLIP8.33□□□□□ -1.08
UBE2D3-218ENST00000505009 PHC3Q8NDX5 983 aa8.33□□□□□ -1.08
UBE2D3-218ENST00000505009 ZNF507Q8TCN5 953 aa8.33□□□□□ -1.08
UBE2D3-218ENST00000505009 NOC4LQ9BVI4 516 aaKnown RBP8.33□□□□□ -1.08
UBE2D3-218ENST00000505009 MIR1-1HGQ9H1L0 117 aa8.33□□□□□ -1.08
UBE2D3-218ENST00000505009 MRS2Q9HD23 443 aa8.33□□□□□ -1.08
UBE2D3-218ENST00000505009 PAK6Q9NQU5 681 aaPredicted RBP8.33□□□□□ -1.08
UBE2D3-218ENST00000505009 SNCAIPQ9Y6H5 919 aa8.33□□□□□ -1.08
UBE2D3-218ENST00000505009 CD96P40200 585 aa8.32□□□□□ -1.08
UBE2D3-218ENST00000505009 ETF1P62495 437 aaKnown RBP8.32□□□□□ -1.08
UBE2D3-218ENST00000505009 SPRED2Q7Z698 418 aa8.32□□□□□ -1.08
UBE2D3-218ENST00000505009 FLCNQ8NFG4 579 aa8.32□□□□□ -1.08
UBE2D3-218ENST00000505009 GIPC2Q8TF65 315 aa8.32□□□□□ -1.08
UBE2D3-218ENST00000505009 BCL7CQ8WUZ0 217 aaPredicted RBP8.32□□□□□ -1.08
UBE2D3-218ENST00000505009 JARID2Q92833 1246 aaPredicted RBP8.32□□□□□ -1.08
UBE2D3-218ENST00000505009 BCL2L13Q9BXK5 485 aa8.32□□□□□ -1.08
UBE2D3-218ENST00000505009 KRTAP4-8Q9BYQ9 185 aa8.32□□□□□ -1.08
UBE2D3-218ENST00000505009 PLAGL2Q9UPG8 496 aa8.32□□□□□ -1.08
UBE2D3-218ENST00000505009 EOMESO95936 686 aa8.31□□□□□ -1.08
UBE2D3-218ENST00000505009 ITIH2P19823 946 aa8.31□□□□□ -1.08
UBE2D3-218ENST00000505009 GRK4P32298 578 aa8.31□□□□□ -1.08
UBE2D3-218ENST00000505009 IRAK1P51617 712 aa8.31□□□□□ -1.08
UBE2D3-218ENST00000505009 MCTP1Q6DN14 999 aa8.31□□□□□ -1.08
UBE2D3-218ENST00000505009 TP53INP2Q8IXH6 220 aa8.31□□□□□ -1.08
UBE2D3-218ENST00000505009 NETO1Q8TDF5 533 aa8.31□□□□□ -1.08
UBE2D3-218ENST00000505009 ADGRE2Q9UHX3 823 aa8.31□□□□□ -1.08
UBE2D3-218ENST00000505009 CNTNAP4Q9C0A0 1308 aa8.3□□□□□ -1.08
UBE2D3-218ENST00000505009 LRIG2O94898 1065 aa8.3□□□□□ -1.08
UBE2D3-218ENST00000505009 SLITRK5O94991 958 aa8.3□□□□□ -1.08
UBE2D3-218ENST00000505009 BNC2Q6ZN30 1099 aaPredicted RBP8.3□□□□□ -1.08
UBE2D3-218ENST00000505009 KCT2Q8NC54 265 aa8.3□□□□□ -1.08
UBE2D3-218ENST00000505009 PF4P02776 101 aa8.29□□□□□ -1.08
UBE2D3-218ENST00000505009 CEACAM5P06731 702 aa8.29□□□□□ -1.08
UBE2D3-218ENST00000505009 ARHGAP27Q6ZUM4 889 aa8.29□□□□□ -1.08
UBE2D3-218ENST00000505009 RIN3Q8TB24 985 aa8.29□□□□□ -1.08
UBE2D3-218ENST00000505009 FBXL18Q96ME1 805 aa8.29□□□□□ -1.08
UBE2D3-218ENST00000505009 SLC5A6Q9Y289 635 aa8.29□□□□□ -1.08
UBE2D3-218ENST00000505009 COL17A1Q9UMD9 1497 aaPredicted RBP8.28□□□□□ -1.08
UBE2D3-218ENST00000505009 ZBTB7CA1YPR0 619 aa8.28□□□□□ -1.08
UBE2D3-218ENST00000505009 RLBP1P12271 317 aa8.28□□□□□ -1.08
UBE2D3-218ENST00000505009 TAL1P17542 331 aaPredicted RBP8.28□□□□□ -1.08
UBE2D3-218ENST00000505009 TSNAXIP1Q2TAA8 658 aa8.28□□□□□ -1.08
UBE2D3-218ENST00000505009 PRAMEF13Q5VWM6 474 aa8.28□□□□□ -1.08
UBE2D3-218ENST00000505009 XAGE3Q8WTP9 111 aa8.28□□□□□ -1.08
UBE2D3-218ENST00000505009 MIPEPQ99797 713 aa8.28□□□□□ -1.08
UBE2D3-218ENST00000505009 DPH2Q9BQC3 489 aaPredicted RBP8.28□□□□□ -1.08
UBE2D3-218ENST00000505009 FOXQ1Q9C009 403 aa8.28□□□□□ -1.08
UBE2D3-218ENST00000505009 RPL6Q02878 288 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-218ENST00000505009 CAMK2GQ13555 558 aaPredicted RBP8.27□□□□□ -1.09
UBE2D3-218ENST00000505009 IFI16Q16666 785 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-218ENST00000505009 TMCO4Q5TGY1 634 aa8.27□□□□□ -1.09
UBE2D3-218ENST00000505009 HID1Q8IV36 788 aa8.27□□□□□ -1.09
UBE2D3-218ENST00000505009 RHOVQ96L33 236 aa8.27□□□□□ -1.09
UBE2D3-218ENST00000505009 BCL11AQ9H165 835 aa8.27□□□□□ -1.09
UBE2D3-218ENST00000505009 MKNK2Q9HBH9 465 aa8.27□□□□□ -1.09
UBE2D3-218ENST00000505009 TJP2Q9UDY2 1190 aa8.27□□□□□ -1.09
UBE2D3-218ENST00000505009 CORINQ9Y5Q5 1042 aa8.27□□□□□ -1.09
UBE2D3-218ENST00000505009 PRR33A8MZF0 331 aa8.26□□□□□ -1.09
UBE2D3-218ENST00000505009 F13A1P00488 732 aa8.26□□□□□ -1.09
UBE2D3-218ENST00000505009 PGRP06401 933 aa8.26□□□□□ -1.09
UBE2D3-218ENST00000505009 CD8BP10966 210 aa8.26□□□□□ -1.09
UBE2D3-218ENST00000505009 GBP2P32456 591 aaPredicted RBP8.26□□□□□ -1.09
UBE2D3-218ENST00000505009 CAP2P40123 477 aa8.26□□□□□ -1.09
UBE2D3-218ENST00000505009 FAM160A1Q05DH4 1040 aa8.26□□□□□ -1.09
UBE2D3-218ENST00000505009 AOC3Q16853 763 aa8.26□□□□□ -1.09
UBE2D3-218ENST00000505009 HOMEZQ8IX15 550 aa8.26□□□□□ -1.09
UBE2D3-218ENST00000505009 COPRSQ9NQ92 184 aa8.26□□□□□ -1.09
UBE2D3-218ENST00000505009 GTF2IRD1Q9UHL9 959 aa8.26□□□□□ -1.09
UBE2D3-218ENST00000505009 FAM221AA4D161 298 aa8.25□□□□□ -1.09
UBE2D3-218ENST00000505009 MINDY4BA8MYZ0 360 aa8.25□□□□□ -1.09
UBE2D3-218ENST00000505009 IGF2BP3O00425 579 aaKnown RBP eCLIP8.25□□□□□ -1.09
UBE2D3-218ENST00000505009 CST3P01034 146 aaPredicted RBP8.25□□□□□ -1.09
UBE2D3-218ENST00000505009 LMNB2Q03252 620 aa8.25□□□□□ -1.09
UBE2D3-218ENST00000505009 MRPL58Q14197 206 aaKnown RBP8.25□□□□□ -1.09
UBE2D3-218ENST00000505009 NKPD1Q17RQ9 610 aa8.25□□□□□ -1.09
UBE2D3-218ENST00000505009 SPACA3Q8IXA5 215 aa8.25□□□□□ -1.09
UBE2D3-218ENST00000505009 TMEM74Q96NL1 305 aa8.25□□□□□ -1.09
UBE2D3-218ENST00000505009 TNKS2Q9H2K2 1166 aa8.25□□□□□ -1.09
UBE2D3-218ENST00000505009 PRDM5Q9NQX1 630 aaPredicted RBP8.25□□□□□ -1.09
UBE2D3-218ENST00000505009 CILPO75339 1184 aa8.24□□□□□ -1.09
UBE2D3-218ENST00000505009 PRKCQQ04759 706 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms