RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 CTAGE1Q96RT6 745 aa8.48□□□□□ -1.05
PDGFC-203ENST00000502773 PLCD4Q9BRC7 762 aa8.48□□□□□ -1.05
PDGFC-203ENST00000502773 LRRC27Q9C0I9 530 aa8.48□□□□□ -1.05
PDGFC-203ENST00000502773 GLT8D2Q9H1C3 349 aa8.48□□□□□ -1.05
PDGFC-203ENST00000502773 ARMT1Q9H993 441 aa8.48□□□□□ -1.05
PDGFC-203ENST00000502773 KIAA1468Q9P260 1216 aa8.48□□□□□ -1.05
PDGFC-203ENST00000502773 USP21Q9UK80 565 aa8.48□□□□□ -1.05
PDGFC-203ENST00000502773 RIC1Q4ADV7 1423 aa8.48□□□□□ -1.05
PDGFC-203ENST00000502773 KAT6BQ8WYB5 2073 aa8.48□□□□□ -1.05
PDGFC-203ENST00000502773 hCG_1984214I3L0E3 225 aa8.48□□□□□ -1.05
PDGFC-203ENST00000502773 ORC4O43929 436 aa8.48□□□□□ -1.05
PDGFC-203ENST00000502773 RANBP6O60518 1105 aaKnown RBP8.48□□□□□ -1.05
PDGFC-203ENST00000502773 GTF2A1P52655 376 aaPredicted RBP8.48□□□□□ -1.05
PDGFC-203ENST00000502773 NOSTRINQ8IVI9 506 aa8.48□□□□□ -1.05
PDGFC-203ENST00000502773 CKAP2LQ8IYA6 745 aa8.48□□□□□ -1.05
PDGFC-203ENST00000502773 ZNF713Q8N859 430 aaPredicted RBP8.48□□□□□ -1.05
PDGFC-203ENST00000502773 USP28Q96RU2 1077 aa8.48□□□□□ -1.05
PDGFC-203ENST00000502773 MKNK2Q9HBH9 465 aa8.48□□□□□ -1.05
PDGFC-203ENST00000502773 SH3GLB2Q9NR46 395 aa8.48□□□□□ -1.05
PDGFC-203ENST00000502773 TRPC5Q9UL62 973 aaPredicted RBP8.48□□□□□ -1.05
PDGFC-203ENST00000502773 SUGT1Q9Y2Z0 365 aa8.48□□□□□ -1.05
PDGFC-203ENST00000502773 XDHP47989 1333 aa8.48□□□□□ -1.05
PDGFC-203ENST00000502773 PRPF3O43395 683 aaKnown RBP8.47□□□□□ -1.05
PDGFC-203ENST00000502773 TTLL5Q6EMB2 1281 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 CNBD1Q8NA66 436 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 BANK1Q8NDB2 785 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 ZNF830Q96NB3 372 aaPredicted RBP8.47□□□□□ -1.05
PDGFC-203ENST00000502773 ZSCAN10Q96SZ4 725 aaPredicted RBP8.47□□□□□ -1.05
PDGFC-203ENST00000502773 CBX8Q9HC52 389 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 NDUFB9Q9Y6M9 179 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 NID2Q14112 1375 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 GNPATO15228 680 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 ZNF75DP51815 510 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 SPAG1Q07617 926 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 MCTP2Q6DN12 878 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 ZNF654Q8IZM8 581 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 MRVI1Q9Y6F6 885 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 TSPY2A6NKD2 308 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 POLR3DP05423 398 aaPredicted RBP8.47□□□□□ -1.05
PDGFC-203ENST00000502773 LIG1P18858 919 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 KCNA4P22459 653 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 U2AF2P26368 475 aaKnown RBP eCLIP8.47□□□□□ -1.05
PDGFC-203ENST00000502773 TUBB4BP68371 445 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 ORC2Q13416 577 aaPredicted RBP8.47□□□□□ -1.05
PDGFC-203ENST00000502773 TPD52L1Q16890 204 aaPredicted RBP8.47□□□□□ -1.05
PDGFC-203ENST00000502773 SOGA3Q5TF21 947 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 HELBQ8NG08 1087 aaPredicted RBP8.47□□□□□ -1.05
PDGFC-203ENST00000502773 SMARCE1Q969G3 411 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 C8orf37Q96NL8 207 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 PCDHA7Q9UN72 937 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 NWD2Q9ULI1 1742 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 ZNF804BA4D1E1 1349 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 UBN2Q6ZU65 1347 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 XIRP1Q702N8 1843 aaKnown RBP8.47□□□□□ -1.05
PDGFC-203ENST00000502773 ZNF202O95125 648 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 DGKHQ86XP1 1220 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 FUCA2Q9BTY2 467 aa8.47□□□□□ -1.05
PDGFC-203ENST00000502773 NCOA5Q9HCD5 579 aaKnown RBP8.47□□□□□ -1.05
PDGFC-203ENST00000502773 ROBO1Q9Y6N7 1651 aa8.46□□□□□ -1.05
PDGFC-203ENST00000502773 TCRBV5S4A2TA0A5A2 114 aa8.46□□□□□ -1.05
PDGFC-203ENST00000502773 LAD1O00515 517 aa8.46□□□□□ -1.05
PDGFC-203ENST00000502773 BCAMP50895 628 aa8.46□□□□□ -1.05
PDGFC-203ENST00000502773 FAM98CQ17RN3 349 aaKnown RBP8.46□□□□□ -1.05
PDGFC-203ENST00000502773 TSR1Q2NL82 804 aaKnown RBP8.46□□□□□ -1.05
PDGFC-203ENST00000502773 C15orf52Q6ZUT6 534 aaKnown RBP8.46□□□□□ -1.05
PDGFC-203ENST00000502773 FBXO33Q7Z6M2 555 aa8.46□□□□□ -1.05
PDGFC-203ENST00000502773 IGDCC4Q8TDY8 1250 aa8.46□□□□□ -1.05
PDGFC-203ENST00000502773 RAB34Q9BZG1 259 aa8.46□□□□□ -1.05
PDGFC-203ENST00000502773 WWC3Q9ULE0 1092 aa8.46□□□□□ -1.05
PDGFC-203ENST00000502773 MINPP1Q9UNW1 487 aa8.46□□□□□ -1.05
PDGFC-203ENST00000502773 GSG1L2A8MUP6 293 aa8.46□□□□□ -1.06
PDGFC-203ENST00000502773 ZSCAN12O43309 604 aa8.46□□□□□ -1.06
PDGFC-203ENST00000502773 NR1I2O75469 434 aa8.46□□□□□ -1.06
PDGFC-203ENST00000502773 MYL1P05976 194 aa8.46□□□□□ -1.06
PDGFC-203ENST00000502773 GRAPQ13588 217 aa8.46□□□□□ -1.06
PDGFC-203ENST00000502773 GRAPLQ8TC17 118 aaPredicted RBP8.46□□□□□ -1.06
PDGFC-203ENST00000502773 EYA3Q99504 573 aa8.46□□□□□ -1.06
PDGFC-203ENST00000502773 LY9Q9HBG7 655 aa8.46□□□□□ -1.06
PDGFC-203ENST00000502773 SLIT2O94813 1529 aa8.46□□□□□ -1.06
PDGFC-203ENST00000502773 SERPINC1P01008 464 aa8.46□□□□□ -1.06
PDGFC-203ENST00000502773 MMP1P03956 469 aa8.46□□□□□ -1.06
PDGFC-203ENST00000502773 SFPQP23246 707 aaKnown RBP eCLIP8.46□□□□□ -1.06
PDGFC-203ENST00000502773 FOSBP53539 338 aa8.46□□□□□ -1.06
PDGFC-203ENST00000502773 GUCY1B3Q02153 619 aa8.46□□□□□ -1.06
PDGFC-203ENST00000502773 BICDL1Q6ZP65 573 aa8.46□□□□□ -1.06
PDGFC-203ENST00000502773 FNBP4Q8N3X1 1017 aaPredicted RBP8.46□□□□□ -1.06
PDGFC-203ENST00000502773 MAGEF1Q9HAY2 307 aa8.46□□□□□ -1.06
PDGFC-203ENST00000502773 ZSWIM5Q9P217 1185 aa8.46□□□□□ -1.06
PDGFC-203ENST00000502773 NSFL1CQ9UNZ2 370 aaKnown RBP8.46□□□□□ -1.06
PDGFC-203ENST00000502773 BCL9LQ86UU0 1499 aa8.46□□□□□ -1.06
PDGFC-203ENST00000502773 CICQ96RK0 1608 aaPredicted RBP8.45□□□□□ -1.06
PDGFC-203ENST00000502773 GNA11P29992 359 aa8.45□□□□□ -1.06
PDGFC-203ENST00000502773 NLRP5P59047 1200 aa8.45□□□□□ -1.06
PDGFC-203ENST00000502773 AMPD3Q01432 767 aa8.45□□□□□ -1.06
PDGFC-203ENST00000502773 FAM196AQ6ZSG2 479 aa8.45□□□□□ -1.06
PDGFC-203ENST00000502773 CRACR2BQ8N4Y2 399 aaPredicted RBP8.45□□□□□ -1.06
PDGFC-203ENST00000502773 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.45□□□□□ -1.06
PDGFC-203ENST00000502773 DNAJC25Q9H1X3 360 aa8.45□□□□□ -1.06
PDGFC-203ENST00000502773 DEF6Q9H4E7 631 aa8.45□□□□□ -1.06
PDGFC-203ENST00000502773 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms