RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 USP17L21D6R901 530 aa13.3□□□□□ -0.28
CDCA7-208ENST00000496441 PRDX5P30044 214 aa13.3□□□□□ -0.28
CDCA7-208ENST00000496441 LIFRP42702 1097 aa13.3□□□□□ -0.28
CDCA7-208ENST00000496441 AKAP17AQ02040 695 aaKnown RBP13.3□□□□□ -0.28
CDCA7-208ENST00000496441 USP49Q70CQ1 688 aa13.3□□□□□ -0.28
CDCA7-208ENST00000496441 GPR101Q96P66 508 aaPredicted RBP13.3□□□□□ -0.28
CDCA7-208ENST00000496441 WDR19Q8NEZ3 1342 aa13.3□□□□□ -0.28
CDCA7-208ENST00000496441 FMNL1O95466 1100 aaPredicted RBP13.29□□□□□ -0.28
CDCA7-208ENST00000496441 CAVIN2O95810 425 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 PTPAQ15257 358 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 TXNRD3Q86VQ6 643 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 AMIGO3Q86WK7 504 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 FAM84BQ96KN1 310 aaPredicted RBP13.29□□□□□ -0.28
CDCA7-208ENST00000496441 MAP3K14Q99558 947 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 PDCL3Q9H2J4 239 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 KCNH3Q9ULD8 1083 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 V9GY48 417 aaPredicted RBP13.29□□□□□ -0.28
CDCA7-208ENST00000496441 POLR2DO15514 142 aaKnown RBP13.29□□□□□ -0.28
CDCA7-208ENST00000496441 PLEKHA8P1O95397 391 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 TOB1P50616 345 aaPredicted RBP13.29□□□□□ -0.28
CDCA7-208ENST00000496441 ALX1Q15699 326 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.29□□□□□ -0.28
CDCA7-208ENST00000496441 JMYQ8N9B5 988 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 STAG1Q8WVM7 1258 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 PRIMPOLQ96LW4 560 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 SPATA31A5Q5VU36 1347 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 SPATA31A7Q8IWB4 1347 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 COL16A1Q07092 1604 aaPredicted RBP13.29□□□□□ -0.28
CDCA7-208ENST00000496441 C4AP0C0L4 1744 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 C4BP0C0L5 1744 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 SERPINC1P01008 464 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 MMP1P03956 469 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 CYP2D6P10635 497 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 NOM1Q5C9Z4 860 aaKnown RBP13.29□□□□□ -0.28
CDCA7-208ENST00000496441 ZNF384Q8TF68 577 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 ESR2Q92731 530 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 AK7Q96M32 723 aa13.29□□□□□ -0.28
CDCA7-208ENST00000496441 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.29□□□□□ -0.28
CDCA7-208ENST00000496441 V9GYY5 206 aaPredicted RBP13.29□□□□□ -0.28
CDCA7-208ENST00000496441 IFNAR1P17181 557 aa13.28□□□□□ -0.28
CDCA7-208ENST00000496441 GNAT2P19087 354 aa13.28□□□□□ -0.28
CDCA7-208ENST00000496441 CASP1P29466 404 aa13.28□□□□□ -0.28
CDCA7-208ENST00000496441 IFIT1BQ5T764 474 aaKnown RBP13.28□□□□□ -0.28
CDCA7-208ENST00000496441 NBPF11Q86T75 865 aa13.28□□□□□ -0.28
CDCA7-208ENST00000496441 FOXP4Q8IVH2 680 aaPredicted RBP13.28□□□□□ -0.28
CDCA7-208ENST00000496441 CRACR2BQ8N4Y2 399 aaPredicted RBP13.28□□□□□ -0.28
CDCA7-208ENST00000496441 ENAHQ8N8S7 591 aaPredicted RBP13.28□□□□□ -0.28
CDCA7-208ENST00000496441 MRFAP1L1Q96HT8 127 aa13.28□□□□□ -0.28
CDCA7-208ENST00000496441 SETDB2Q96T68 719 aa13.28□□□□□ -0.28
CDCA7-208ENST00000496441 BCL2L12Q9HB09 334 aa13.28□□□□□ -0.28
CDCA7-208ENST00000496441 PCDHA5Q9Y5H7 936 aa13.28□□□□□ -0.28
CDCA7-208ENST00000496441 CHD4Q14839 1912 aa13.28□□□□□ -0.28
CDCA7-208ENST00000496441 U2AF2P26368 475 aaKnown RBP eCLIP13.28□□□□□ -0.283e-8■■■□□ 16.8
CDCA7-208ENST00000496441 NLRP12P59046 1061 aa13.28□□□□□ -0.28
CDCA7-208ENST00000496441 METTL16Q86W50 562 aaKnown RBP13.28□□□□□ -0.28
CDCA7-208ENST00000496441 CDCA7Q9BWT1 371 aaPredicted RBP13.28□□□□□ -0.28
CDCA7-208ENST00000496441 ZPR1O75312 459 aa13.27□□□□□ -0.28
CDCA7-208ENST00000496441 CFAP100Q494V2 611 aa13.27□□□□□ -0.28
CDCA7-208ENST00000496441 EARS2Q5JPH6 523 aaKnown RBP13.27□□□□□ -0.28
CDCA7-208ENST00000496441 TRMT44Q8IYL2 757 aaKnown RBP13.27□□□□□ -0.28
CDCA7-208ENST00000496441 ZNF710Q8N1W2 664 aa13.27□□□□□ -0.28
CDCA7-208ENST00000496441 STAMQ92783 540 aa13.27□□□□□ -0.28
CDCA7-208ENST00000496441 RNF41Q9H4P4 317 aaPredicted RBP13.27□□□□□ -0.28
CDCA7-208ENST00000496441 RPS8P62241 208 aaKnown RBP13.27□□□□□ -0.29
CDCA7-208ENST00000496441 MECOMQ03112 1051 aa13.27□□□□□ -0.29
CDCA7-208ENST00000496441 SARM1Q6SZW1 724 aa13.27□□□□□ -0.29
CDCA7-208ENST00000496441 KRI1Q8N9T8 703 aaKnown RBP13.27□□□□□ -0.29
CDCA7-208ENST00000496441 DPF2Q92785 391 aa13.27□□□□□ -0.29
CDCA7-208ENST00000496441 NLRP3Q96P20 1036 aa13.27□□□□□ -0.29
CDCA7-208ENST00000496441 COL1A1P02452 1464 aaPredicted RBP13.27□□□□□ -0.29
CDCA7-208ENST00000496441 COBLO75128 1261 aa13.26□□□□□ -0.29
CDCA7-208ENST00000496441 PRR29P0C7W0 189 aa13.26□□□□□ -0.29
CDCA7-208ENST00000496441 AFMP43652 599 aa13.26□□□□□ -0.29
CDCA7-208ENST00000496441 ZSCAN10Q96SZ4 725 aaPredicted RBP13.26□□□□□ -0.29
CDCA7-208ENST00000496441 RIOK1Q9BRS2 568 aaKnown RBP13.26□□□□□ -0.29
CDCA7-208ENST00000496441 BSDC1Q9NW68 430 aaPredicted RBP13.26□□□□□ -0.29
CDCA7-208ENST00000496441 ANKIB1Q9P2G1 1089 aa13.26□□□□□ -0.29
CDCA7-208ENST00000496441 SERTAD1Q9UHV2 236 aa13.26□□□□□ -0.29
CDCA7-208ENST00000496441 DEXIO95424 95 aa13.26□□□□□ -0.29
CDCA7-208ENST00000496441 FANCLQ9NW38 375 aa13.26□□□□□ -0.29
CDCA7-208ENST00000496441 PNPLA7Q6ZV29 1317 aa13.26□□□□□ -0.29
CDCA7-208ENST00000496441 VEGFAP15692 232 aaPredicted RBP13.26□□□□□ -0.29
CDCA7-208ENST00000496441 TPM4P67936 248 aa13.26□□□□□ -0.29
CDCA7-208ENST00000496441 PDE4BQ07343 736 aa13.26□□□□□ -0.29
CDCA7-208ENST00000496441 RESP18Q5W5W9 173 aa13.26□□□□□ -0.29
CDCA7-208ENST00000496441 CREBRFQ8IUR6 639 aa13.26□□□□□ -0.29
CDCA7-208ENST00000496441 WASF1Q92558 559 aa13.26□□□□□ -0.29
CDCA7-208ENST00000496441 SMARCC1Q92922 1105 aaPredicted RBP13.26□□□□□ -0.29
CDCA7-208ENST00000496441 SHISA4Q96DD7 197 aa13.26□□□□□ -0.29
CDCA7-208ENST00000496441 THRAP3Q9Y2W1 955 aaKnown RBP13.26□□□□□ -0.29
CDCA7-208ENST00000496441 WNT7AO00755 349 aa13.25□□□□□ -0.29
CDCA7-208ENST00000496441 PPP6R2O75170 966 aa13.25□□□□□ -0.29
CDCA7-208ENST00000496441 FANCCQ00597 558 aa13.25□□□□□ -0.29
CDCA7-208ENST00000496441 NCAPHQ15003 741 aa13.25□□□□□ -0.29
CDCA7-208ENST00000496441 ZNF174Q15697 407 aa13.25□□□□□ -0.29
CDCA7-208ENST00000496441 KLHL10Q6JEL2 608 aa13.25□□□□□ -0.29
CDCA7-208ENST00000496441 CTR9Q6PD62 1173 aa13.25□□□□□ -0.29
CDCA7-208ENST00000496441 KRBA2Q6ZNG9 492 aa13.25□□□□□ -0.29
CDCA7-208ENST00000496441 IQCA1Q86XH1 822 aa13.25□□□□□ -0.29
CDCA7-208ENST00000496441 DHX58Q96C10 678 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms