RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 ZNF512BQ96KM6 892 aaPredicted RBP29.33■■■□□ 2.29
TTC3-224ENST00000494243 GRK4P32298 578 aa29.32■■■□□ 2.28
TTC3-224ENST00000494243 FCGRTP55899 365 aa29.32■■■□□ 2.28
TTC3-224ENST00000494243 NAA16Q6N069 864 aaPredicted RBP29.32■■■□□ 2.28
TTC3-224ENST00000494243 RAET1EQ8TD07 263 aa29.32■■■□□ 2.28
TTC3-224ENST00000494243 CAP2P40123 477 aa29.31■■■□□ 2.28
TTC3-224ENST00000494243 PPP4CP60510 307 aa29.31■■■□□ 2.28
TTC3-224ENST00000494243 PRKCZQ05513 592 aa29.31■■■□□ 2.28
TTC3-224ENST00000494243 ADGRA1Q86SQ6 560 aa29.31■■■□□ 2.28
TTC3-224ENST00000494243 AATFQ9NY61 560 aaKnown RBP eCLIP29.31■■■□□ 2.28
TTC3-224ENST00000494243 DBNLQ9UJU6 430 aaKnown RBP29.31■■■□□ 2.28
TTC3-224ENST00000494243 GABRQQ9UN88 632 aa29.31■■■□□ 2.28
TTC3-224ENST00000494243 AGTPBP1Q9UPW5 1226 aa29.31■■■□□ 2.28
TTC3-224ENST00000494243 MGAMO43451 1857 aa29.31■■■□□ 2.28
TTC3-224ENST00000494243 SPP2Q13103 211 aa29.3■■■□□ 2.28
TTC3-224ENST00000494243 TREML2Q5T2D2 321 aa29.3■■■□□ 2.28
TTC3-224ENST00000494243 BAG3O95817 575 aa29.29■■■□□ 2.28
TTC3-224ENST00000494243 ZAP70P43403 619 aa29.29■■■□□ 2.28
TTC3-224ENST00000494243 NOL10Q9BSC4 688 aaKnown RBP29.29■■■□□ 2.28
TTC3-224ENST00000494243 TLR7Q9NYK1 1049 aaKnown RBP29.29■■■□□ 2.28
TTC3-224ENST00000494243 HERC5Q9UII4 1024 aaKnown RBP29.29■■■□□ 2.28
TTC3-224ENST00000494243 MAST2Q6P0Q8 1798 aa29.29■■■□□ 2.28
TTC3-224ENST00000494243 ZNF280CQ8ND82 737 aa29.28■■■□□ 2.28
TTC3-224ENST00000494243 EAF2Q96CJ1 260 aaPredicted RBP29.28■■■□□ 2.28
TTC3-224ENST00000494243 GCC1Q96CN9 775 aa29.28■■■□□ 2.28
TTC3-224ENST00000494243 SHISA4Q96DD7 197 aa29.28■■■□□ 2.28
TTC3-224ENST00000494243 PIH1D3Q9NQM4 214 aaKnown RBP29.28■■■□□ 2.28
TTC3-224ENST00000494243 PI4KBQ9UBF8 816 aa29.28■■■□□ 2.28
TTC3-224ENST00000494243 MYO5AQ9Y4I1 1855 aaKnown RBP29.27■■■□□ 2.28
TTC3-224ENST00000494243 SIPA1L1O43166 1804 aa29.27■■■□□ 2.28
TTC3-224ENST00000494243 PLCG2P16885 1265 aa29.27■■■□□ 2.28
TTC3-224ENST00000494243 PROCA1Q8NCQ7 364 aaPredicted RBP29.27■■■□□ 2.28
TTC3-224ENST00000494243 SMCR8Q8TEV9 937 aaPredicted RBP29.27■■■□□ 2.28
TTC3-224ENST00000494243 TGFBRAP1Q8WUH2 860 aa29.27■■■□□ 2.28
TTC3-224ENST00000494243 CCDC8Q9H0W5 538 aaPredicted RBP29.27■■■□□ 2.28
TTC3-224ENST00000494243 DHX36Q9H2U1 1008 aaKnown RBP29.27■■■□□ 2.28
TTC3-224ENST00000494243 DIEXFQ68CQ4 756 aaKnown RBP29.26■■■□□ 2.27
TTC3-224ENST00000494243 ATAD5Q96QE3 1844 aa29.26■■■□□ 2.27
TTC3-224ENST00000494243 IGSF3O75054 1194 aa29.25■■■□□ 2.27
TTC3-224ENST00000494243 CCL5P13501 91 aa29.25■■■□□ 2.27
TTC3-224ENST00000494243 CEP85Q6P2H3 762 aa29.25■■■□□ 2.27
TTC3-224ENST00000494243 METTL16Q86W50 562 aaKnown RBP29.25■■■□□ 2.27
TTC3-224ENST00000494243 MAPKAPK5Q8IW41 473 aa29.25■■■□□ 2.27
TTC3-224ENST00000494243 TBC1D2Q9BYX2 928 aa29.25■■■□□ 2.27
TTC3-224ENST00000494243 FLT1P17948 1338 aa29.24■■■□□ 2.27
TTC3-224ENST00000494243 USP17L5A8MUK1 530 aa29.24■■■□□ 2.27
TTC3-224ENST00000494243 FLT3LGP49771 235 aa29.24■■■□□ 2.27
TTC3-224ENST00000494243 HMGCS2P54868 508 aa29.24■■■□□ 2.27
TTC3-224ENST00000494243 JAG1P78504 1218 aa29.24■■■□□ 2.27
TTC3-224ENST00000494243 ANKRD13CQ8N6S4 541 aa29.24■■■□□ 2.27
TTC3-224ENST00000494243 CDK5RAP2Q96SN8 1893 aa29.24■■■□□ 2.27
TTC3-224ENST00000494243 DNAJC18Q9H819 358 aa29.24■■■□□ 2.27
TTC3-224ENST00000494243 LOC285556D6RIA3 1793 aa29.24■■■□□ 2.27
TTC3-224ENST00000494243 GJB1P08034 283 aa29.23■■■□□ 2.27
TTC3-224ENST00000494243 SH3D19Q5HYK7 790 aa29.23■■■□□ 2.27
TTC3-224ENST00000494243 HABP4Q5JVS0 413 aaKnown RBP29.23■■■□□ 2.27
TTC3-224ENST00000494243 SLAIN1Q8ND83 568 aa29.23■■■□□ 2.27
TTC3-224ENST00000494243 BIN2Q9UBW5 565 aaPredicted RBP29.23■■■□□ 2.27
TTC3-224ENST00000494243 ZBED9Q6R2W3 1325 aa29.22■■■□□ 2.27
TTC3-224ENST00000494243 FOXP4Q8IVH2 680 aaPredicted RBP29.22■■■□□ 2.27
TTC3-224ENST00000494243 PANK1Q8TE04 598 aa29.22■■■□□ 2.27
TTC3-224ENST00000494243 PNMA3Q9UL41 463 aa29.22■■■□□ 2.27
TTC3-224ENST00000494243 PALD1Q9ULE6 856 aa29.22■■■□□ 2.27
TTC3-224ENST00000494243 FOCADQ5VW36 1801 aa29.22■■■□□ 2.27
TTC3-224ENST00000494243 TNPO2O14787 897 aaKnown RBP29.21■■■□□ 2.27
TTC3-224ENST00000494243 ADCY3O60266 1144 aa29.21■■■□□ 2.27
TTC3-224ENST00000494243 GJA8P48165 433 aa29.21■■■□□ 2.27
TTC3-224ENST00000494243 DYNLL1P63167 89 aaKnown RBP29.21■■■□□ 2.27
TTC3-224ENST00000494243 WDR18Q9BV38 432 aa29.21■■■□□ 2.27
TTC3-224ENST00000494243 RNF208Q9H0X6 261 aa29.21■■■□□ 2.27
TTC3-224ENST00000494243 PCDH10Q9P2E7 1040 aa29.21■■■□□ 2.27
TTC3-224ENST00000494243 CYP7A1P22680 504 aa29.2■■■□□ 2.26
TTC3-224ENST00000494243 UBXN2AP68543 259 aa29.2■■■□□ 2.26
TTC3-224ENST00000494243 IRF5Q13568 498 aa29.2■■■□□ 2.26
TTC3-224ENST00000494243 FAM110CQ1W6H9 321 aa29.2■■■□□ 2.26
TTC3-224ENST00000494243 SHROOM1Q2M3G4 852 aaPredicted RBP29.2■■■□□ 2.26
TTC3-224ENST00000494243 NKX2-3Q8TAU0 364 aa29.2■■■□□ 2.26
TTC3-224ENST00000494243 ELNP15502 786 aa29.19■■■□□ 2.26
TTC3-224ENST00000494243 UBE2Q1Q7Z7E8 422 aa29.19■■■□□ 2.26
TTC3-224ENST00000494243 PXYLP1Q8TE99 480 aa29.19■■■□□ 2.26
TTC3-224ENST00000494243 UNC93B1Q9H1C4 597 aa29.19■■■□□ 2.26
TTC3-224ENST00000494243 ASCC2Q9H1I8 757 aaPredicted RBP29.19■■■□□ 2.26
TTC3-224ENST00000494243 AS3MTQ9HBK9 375 aa29.19■■■□□ 2.26
TTC3-224ENST00000494243 EXOC6BQ9Y2D4 811 aa29.19■■■□□ 2.26
TTC3-224ENST00000494243 NDUFB9Q9Y6M9 179 aa29.19■■■□□ 2.26
TTC3-224ENST00000494243 IDH1O75874 414 aaKnown RBP29.18■■■□□ 2.26
TTC3-224ENST00000494243 ASNSP08243 561 aa29.18■■■□□ 2.26
TTC3-224ENST00000494243 GCLCP48506 637 aaPredicted RBP29.18■■■□□ 2.26
TTC3-224ENST00000494243 ANTXR1Q9H6X2 564 aa29.18■■■□□ 2.26
TTC3-224ENST00000494243 SAP30BPQ9UHR5 308 aaKnown RBP29.18■■■□□ 2.26
TTC3-224ENST00000494243 PABPC4Q13310 644 aaKnown RBP eCLIP29.17■■■□□ 2.26
TTC3-224ENST00000494243 BACE1P56817 501 aa29.16■■■□□ 2.26
TTC3-224ENST00000494243 MTMR2Q13614 643 aa29.16■■■□□ 2.26
TTC3-224ENST00000494243 CRACR2BQ8N4Y2 399 aaPredicted RBP29.16■■■□□ 2.26
TTC3-224ENST00000494243 MIGA1Q8NAN2 632 aa29.16■■■□□ 2.26
TTC3-224ENST00000494243 COA7Q96BR5 231 aa29.16■■■□□ 2.26
TTC3-224ENST00000494243 DOCK3Q8IZD9 2030 aa29.16■■■□□ 2.26
TTC3-224ENST00000494243 H0YGN5 161 aa29.15■■■□□ 2.26
TTC3-224ENST00000494243 INHAP05111 366 aa29.15■■■□□ 2.26
TTC3-224ENST00000494243 AACSQ86V21 672 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms