RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 FAM196BA6NMK8 535 aa14.12□□□□□ -0.15
UBA3-211ENST00000493957 PPP1R12BO60237 982 aaPredicted RBP14.12□□□□□ -0.15
UBA3-211ENST00000493957 BAG3O95817 575 aa14.12□□□□□ -0.15
UBA3-211ENST00000493957 ECE1P42892 770 aa14.12□□□□□ -0.15
UBA3-211ENST00000493957 PDE1AP54750 535 aa14.12□□□□□ -0.15
UBA3-211ENST00000493957 RIOK1Q9BRS2 568 aaKnown RBP14.12□□□□□ -0.15
UBA3-211ENST00000493957 OSBPL5Q9H0X9 879 aaPredicted RBP14.12□□□□□ -0.15
UBA3-211ENST00000493957 STAP2Q9UGK3 403 aa14.12□□□□□ -0.15
UBA3-211ENST00000493957 FLT1P17948 1338 aa14.12□□□□□ -0.15
UBA3-211ENST00000493957 GLRX3O76003 335 aaKnown RBP14.11□□□□□ -0.15
UBA3-211ENST00000493957 PDE4AP27815 886 aa14.11□□□□□ -0.15
UBA3-211ENST00000493957 INPP5BP32019 993 aa14.11□□□□□ -0.15
UBA3-211ENST00000493957 SLC4A8Q2Y0W8 1093 aa14.11□□□□□ -0.15
UBA3-211ENST00000493957 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.11□□□□□ -0.15
UBA3-211ENST00000493957 ZSCAN29Q8IWY8 852 aaPredicted RBP14.11□□□□□ -0.15
UBA3-211ENST00000493957 LCORLQ8N3X6 602 aa14.11□□□□□ -0.15
UBA3-211ENST00000493957 KBTBD3Q8NAB2 608 aa14.11□□□□□ -0.15
UBA3-211ENST00000493957 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.11□□□□□ -0.15
UBA3-211ENST00000493957 CSRNP1Q96S65 589 aa14.11□□□□□ -0.15
UBA3-211ENST00000493957 SAP30BPQ9UHR5 308 aaKnown RBP14.11□□□□□ -0.15
UBA3-211ENST00000493957 COL2A1P02458 1487 aaPredicted RBP14.11□□□□□ -0.15
UBA3-211ENST00000493957 MAGEB6P1A0A0J9YX57 407 aa14.1□□□□□ -0.15
UBA3-211ENST00000493957 ERC2O15083 957 aa14.1□□□□□ -0.15
UBA3-211ENST00000493957 IGSF3O75054 1194 aa14.1□□□□□ -0.15
UBA3-211ENST00000493957 PLCG2P16885 1265 aa14.1□□□□□ -0.15
UBA3-211ENST00000493957 GJA5P36382 358 aa14.1□□□□□ -0.15
UBA3-211ENST00000493957 IREB2P48200 963 aaKnown RBP14.1□□□□□ -0.15
UBA3-211ENST00000493957 VGLL4Q14135 290 aa14.1□□□□□ -0.15
UBA3-211ENST00000493957 PLEKHM2Q8IWE5 1019 aa14.1□□□□□ -0.15
UBA3-211ENST00000493957 ZKSCAN4Q969J2 545 aaPredicted RBP14.1□□□□□ -0.15
UBA3-211ENST00000493957 WRNIP1Q96S55 665 aa14.1□□□□□ -0.15
UBA3-211ENST00000493957 ARMT1Q9H993 441 aa14.1□□□□□ -0.15
UBA3-211ENST00000493957 ELP3Q9H9T3 547 aa14.1□□□□□ -0.15
UBA3-211ENST00000493957 CASP8AP2Q9UKL3 1982 aa14.1□□□□□ -0.15
UBA3-211ENST00000493957 PRKAB2O43741 272 aa14.09□□□□□ -0.15
UBA3-211ENST00000493957 MBD4O95243 580 aa14.09□□□□□ -0.15
UBA3-211ENST00000493957 HSPA1AP0DMV8 641 aaKnown RBP14.09□□□□□ -0.15
UBA3-211ENST00000493957 HSPA1BP0DMV9 641 aaKnown RBP14.09□□□□□ -0.15
UBA3-211ENST00000493957 KIF23Q02241 960 aaPredicted RBP14.09□□□□□ -0.15
UBA3-211ENST00000493957 SPNS2Q8IVW8 549 aa14.09□□□□□ -0.15
UBA3-211ENST00000493957 ANKRD13AQ8IZ07 590 aa14.09□□□□□ -0.15
UBA3-211ENST00000493957 CCDC102AQ96A19 550 aa14.09□□□□□ -0.15
UBA3-211ENST00000493957 ZNF341Q9BYN7 854 aa14.09□□□□□ -0.15
UBA3-211ENST00000493957 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.09□□□□□ -0.15
UBA3-211ENST00000493957 PUS7LQ9H0K6 701 aaKnown RBP14.09□□□□□ -0.15
UBA3-211ENST00000493957 PALD1Q9ULE6 856 aa14.09□□□□□ -0.15
UBA3-211ENST00000493957 SNCAIPQ9Y6H5 919 aa14.09□□□□□ -0.15
UBA3-211ENST00000493957 MAP3K9P80192 1104 aa14.08□□□□□ -0.16
UBA3-211ENST00000493957 NOGQ13253 232 aa14.08□□□□□ -0.16
UBA3-211ENST00000493957 UBE3CQ15386 1083 aa14.08□□□□□ -0.16
UBA3-211ENST00000493957 SPRYD7Q5W111 196 aa14.08□□□□□ -0.16
UBA3-211ENST00000493957 DCAF15Q66K64 600 aa14.08□□□□□ -0.16
UBA3-211ENST00000493957 SKAP1Q86WV1 359 aa14.08□□□□□ -0.16
UBA3-211ENST00000493957 SDR42E1Q8WUS8 393 aa14.08□□□□□ -0.16
UBA3-211ENST00000493957 OSBP2Q969R2 916 aa14.08□□□□□ -0.16
UBA3-211ENST00000493957 SLC10A4Q96EP9 437 aa14.08□□□□□ -0.16
UBA3-211ENST00000493957 WNK4Q96J92 1243 aa14.08□□□□□ -0.16
UBA3-211ENST00000493957 FSD1Q9BTV5 496 aa14.08□□□□□ -0.16
UBA3-211ENST00000493957 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.08□□□□□ -0.16
UBA3-211ENST00000493957 PHF20L1A8MW92 1017 aa14.07□□□□□ -0.16
UBA3-211ENST00000493957 M0R2C6 588 aa14.07□□□□□ -0.16
UBA3-211ENST00000493957 RNF113AO15541 343 aaKnown RBP14.07□□□□□ -0.16
UBA3-211ENST00000493957 MAP2K2P36507 400 aa14.07□□□□□ -0.16
UBA3-211ENST00000493957 USP5P45974 858 aa14.07□□□□□ -0.16
UBA3-211ENST00000493957 RRP1BQ14684 758 aaKnown RBP14.07□□□□□ -0.16
UBA3-211ENST00000493957 SEC62Q99442 399 aaKnown RBP14.07□□□□□ -0.16
UBA3-211ENST00000493957 DNAJC18Q9H819 358 aa14.07□□□□□ -0.16
UBA3-211ENST00000493957 WBP1LQ9NX94 342 aa14.07□□□□□ -0.16
UBA3-211ENST00000493957 ZNF112Q9UJU3 913 aa14.07□□□□□ -0.16
UBA3-211ENST00000493957 SMIM22K7EJ46 135 aa14.06□□□□□ -0.16
UBA3-211ENST00000493957 FOXN1O15353 648 aa14.06□□□□□ -0.16
UBA3-211ENST00000493957 CYP2D6P10635 497 aa14.06□□□□□ -0.16
UBA3-211ENST00000493957 MAP3K10Q02779 954 aa14.06□□□□□ -0.16
UBA3-211ENST00000493957 SHROOM1Q2M3G4 852 aaPredicted RBP14.06□□□□□ -0.16
UBA3-211ENST00000493957 TMED8Q6PL24 325 aaPredicted RBP14.06□□□□□ -0.16
UBA3-211ENST00000493957 OPTNQ96CV9 577 aa14.06□□□□□ -0.16
UBA3-211ENST00000493957 HOOK2Q96ED9 719 aa14.06□□□□□ -0.16
UBA3-211ENST00000493957 TSKSQ9UJT2 592 aa14.06□□□□□ -0.16
UBA3-211ENST00000493957 PCDHB13Q9Y5F0 798 aa14.06□□□□□ -0.16
UBA3-211ENST00000493957 ZSCAN25Q6NSZ9 544 aa14.05□□□□□ -0.16
UBA3-211ENST00000493957 CCDC84Q86UT8 332 aaPredicted RBP14.05□□□□□ -0.16
UBA3-211ENST00000493957 APPBP2Q92624 585 aa14.05□□□□□ -0.16
UBA3-211ENST00000493957 CRNKL1Q9BZJ0 848 aaKnown RBP14.05□□□□□ -0.16
UBA3-211ENST00000493957 OSBPL3Q9H4L5 887 aa14.05□□□□□ -0.16
UBA3-211ENST00000493957 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.05□□□□□ -0.16
UBA3-211ENST00000493957 CSADQ9Y600 493 aa14.05□□□□□ -0.16
UBA3-211ENST00000493957 CYP2D7A0A087X1C5 515 aa14.04□□□□□ -0.16
UBA3-211ENST00000493957 SPDYE5A6NIY4 337 aa14.04□□□□□ -0.16
UBA3-211ENST00000493957 UNCXA6NJT0 531 aa14.04□□□□□ -0.16
UBA3-211ENST00000493957 CENPBP07199 599 aaPredicted RBP14.04□□□□□ -0.16
UBA3-211ENST00000493957 JAG1P78504 1218 aa14.04□□□□□ -0.16
UBA3-211ENST00000493957 MAP2K1Q02750 393 aaPredicted RBP14.04□□□□□ -0.16
UBA3-211ENST00000493957 NOL9Q5SY16 702 aaKnown RBP14.04□□□□□ -0.16
UBA3-211ENST00000493957 CCDC129Q6ZRS4 1044 aa14.04□□□□□ -0.16
UBA3-211ENST00000493957 CERS3Q8IU89 383 aa14.04□□□□□ -0.16
UBA3-211ENST00000493957 AIDAQ96BJ3 306 aa14.04□□□□□ -0.16
UBA3-211ENST00000493957 STRBPQ96SI9 672 aaKnown RBP14.04□□□□□ -0.16
UBA3-211ENST00000493957 DCP1AQ9NPI6 582 aaPredicted RBP14.04□□□□□ -0.16
UBA3-211ENST00000493957 LOC285556D6RIA3 1793 aa14.04□□□□□ -0.16
UBA3-211ENST00000493957 TRIM6-TRIM34B2RNG4 842 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms