RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 DDTLA6NHG4 134 aaPredicted RBP9.73□□□□□ -0.85
TM4SF1-204ENST00000493348 GPAA1O43292 621 aa9.73□□□□□ -0.85
TM4SF1-204ENST00000493348 USP2O75604 605 aaPredicted RBP9.73□□□□□ -0.85
TM4SF1-204ENST00000493348 PDE4AP27815 886 aa9.73□□□□□ -0.85
TM4SF1-204ENST00000493348 VEGFBP49765 207 aa9.73□□□□□ -0.85
TM4SF1-204ENST00000493348 MAP3K11Q16584 847 aa9.73□□□□□ -0.85
TM4SF1-204ENST00000493348 SLC4A8Q2Y0W8 1093 aa9.73□□□□□ -0.85
TM4SF1-204ENST00000493348 MCMDC2Q4G0Z9 681 aa9.73□□□□□ -0.85
TM4SF1-204ENST00000493348 ZMYM1Q5SVZ6 1142 aa9.73□□□□□ -0.85
TM4SF1-204ENST00000493348 MOB2Q70IA6 237 aa9.73□□□□□ -0.85
TM4SF1-204ENST00000493348 ZFPM1Q8IX07 1006 aa9.73□□□□□ -0.85
TM4SF1-204ENST00000493348 SDR42E1Q8WUS8 393 aa9.73□□□□□ -0.85
TM4SF1-204ENST00000493348 NAPBQ9H115 298 aa9.73□□□□□ -0.85
TM4SF1-204ENST00000493348 ELP3Q9H9T3 547 aa9.73□□□□□ -0.85
TM4SF1-204ENST00000493348 ZNF287Q9HBT7 754 aa9.73□□□□□ -0.85
TM4SF1-204ENST00000493348 SERPINB13Q9UIV8 391 aa9.73□□□□□ -0.85
TM4SF1-204ENST00000493348 PALD1Q9ULE6 856 aa9.73□□□□□ -0.85
TM4SF1-204ENST00000493348 ATRNL1Q5VV63 1379 aa9.73□□□□□ -0.85
TM4SF1-204ENST00000493348 OTOFQ9HC10 1997 aa9.72□□□□□ -0.85
TM4SF1-204ENST00000493348 TBC1D12O60347 775 aa9.72□□□□□ -0.85
TM4SF1-204ENST00000493348 SDSP20132 328 aa9.72□□□□□ -0.85
TM4SF1-204ENST00000493348 MAP2K1Q02750 393 aaPredicted RBP9.72□□□□□ -0.85
TM4SF1-204ENST00000493348 SREBF2Q12772 1141 aa9.72□□□□□ -0.85
TM4SF1-204ENST00000493348 MKRN3Q13064 507 aaKnown RBP9.72□□□□□ -0.85
TM4SF1-204ENST00000493348 GIMAP6Q6P9H5 292 aa9.72□□□□□ -0.85
TM4SF1-204ENST00000493348 CWC27Q6UX04 472 aaKnown RBP9.72□□□□□ -0.85
TM4SF1-204ENST00000493348 OSBP2Q969R2 916 aa9.72□□□□□ -0.85
TM4SF1-204ENST00000493348 STRBPQ96SI9 672 aaKnown RBP9.72□□□□□ -0.85
TM4SF1-204ENST00000493348 CABP5Q9NP86 173 aa9.72□□□□□ -0.85
TM4SF1-204ENST00000493348 DCP1AQ9NPI6 582 aaPredicted RBP9.72□□□□□ -0.85
TM4SF1-204ENST00000493348 ARPP21Q9UBL0 812 aaPredicted RBP9.72□□□□□ -0.85
TM4SF1-204ENST00000493348 FZD1Q9UP38 647 aa9.72□□□□□ -0.85
TM4SF1-204ENST00000493348 LAMB1P07942 1786 aa9.72□□□□□ -0.85
TM4SF1-204ENST00000493348 ATAD5Q96QE3 1844 aa9.72□□□□□ -0.85
TM4SF1-204ENST00000493348 DOCK1Q14185 1865 aa9.71□□□□□ -0.85
TM4SF1-204ENST00000493348 MINDY4BA8MYZ0 360 aa9.71□□□□□ -0.86
TM4SF1-204ENST00000493348 PATL2C9JE40 543 aaKnown RBP9.71□□□□□ -0.86
TM4SF1-204ENST00000493348 M0R2C6 588 aa9.71□□□□□ -0.86
TM4SF1-204ENST00000493348 CTNND1O60716 968 aaKnown RBP9.71□□□□□ -0.86
TM4SF1-204ENST00000493348 SLC10A3P09131 477 aa9.71□□□□□ -0.86
TM4SF1-204ENST00000493348 ZBTB48P10074 688 aaPredicted RBP9.71□□□□□ -0.86
TM4SF1-204ENST00000493348 MAP2K2P36507 400 aa9.71□□□□□ -0.86
TM4SF1-204ENST00000493348 NMIQ13287 307 aaPredicted RBP9.71□□□□□ -0.86
TM4SF1-204ENST00000493348 SLFNL1Q499Z3 407 aa9.71□□□□□ -0.86
TM4SF1-204ENST00000493348 LDLRAD1Q5T700 205 aa9.71□□□□□ -0.86
TM4SF1-204ENST00000493348 OTUD7BQ6GQQ9 843 aa9.71□□□□□ -0.86
TM4SF1-204ENST00000493348 ERO1BQ86YB8 467 aa9.71□□□□□ -0.86
TM4SF1-204ENST00000493348 CDAN1Q8IWY9 1227 aa9.71□□□□□ -0.86
TM4SF1-204ENST00000493348 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.71□□□□□ -0.864e-13■□□□□ 8.9
TM4SF1-204ENST00000493348 ZKSCAN4Q969J2 545 aaPredicted RBP9.71□□□□□ -0.86
TM4SF1-204ENST00000493348 OPTNQ96CV9 577 aa9.71□□□□□ -0.86
TM4SF1-204ENST00000493348 MKNK2Q9HBH9 465 aa9.71□□□□□ -0.86
TM4SF1-204ENST00000493348 AS3MTQ9HBK9 375 aa9.71□□□□□ -0.86
TM4SF1-204ENST00000493348 SWAP70Q9UH65 585 aa9.71□□□□□ -0.86
TM4SF1-204ENST00000493348 TAOK2Q9UL54 1235 aa9.71□□□□□ -0.86
TM4SF1-204ENST00000493348 SSC5DA1L4H1 1573 aa9.71□□□□□ -0.86
TM4SF1-204ENST00000493348 MANSC4A6NHS7 340 aaPredicted RBP9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 USP17L12C9JPN9 530 aa9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 USP17L21D6R901 530 aa9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 MPHOSPH10O00566 681 aaKnown RBP9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 PRKAB2O43741 272 aa9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 AOC2O75106 756 aa9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 INHBEP58166 350 aa9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 VGLL4Q14135 290 aa9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 CERKLQ49MI3 558 aaPredicted RBP9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 KIAA1211Q6ZU35 1233 aa9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 SH3BP5LQ7L8J4 393 aa9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 RASAL3Q86YV0 1011 aa9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 SCYL3Q8IZE3 742 aa9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 OTUD5Q96G74 571 aa9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 WNK4Q96J92 1243 aa9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 CLMNQ96JQ2 1002 aa9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 SEC62Q99442 399 aaKnown RBP9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 TBC1D2Q9BYX2 928 aa9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 EHD4Q9H223 541 aa9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 GINM1Q9NU53 330 aa9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 CCDC171Q6TFL3 1326 aa9.7□□□□□ -0.86
TM4SF1-204ENST00000493348 A0A0D9SFI3 127 aa9.69□□□□□ -0.86
TM4SF1-204ENST00000493348 FAM196BA6NMK8 535 aa9.69□□□□□ -0.86
TM4SF1-204ENST00000493348 HAX1O00165 279 aa9.69□□□□□ -0.86
TM4SF1-204ENST00000493348 CHGBP05060 677 aa9.69□□□□□ -0.86
TM4SF1-204ENST00000493348 ASNSP08243 561 aa9.69□□□□□ -0.86
TM4SF1-204ENST00000493348 GSPT1P15170 499 aaKnown RBP9.69□□□□□ -0.86
TM4SF1-204ENST00000493348 INPP5BP32019 993 aa9.69□□□□□ -0.86
TM4SF1-204ENST00000493348 GTF2A2P52657 109 aa9.69□□□□□ -0.86
TM4SF1-204ENST00000493348 PPATQ06203 517 aa9.69□□□□□ -0.86
TM4SF1-204ENST00000493348 PDE4BQ07343 736 aa9.69□□□□□ -0.86
TM4SF1-204ENST00000493348 SNAPC2Q13487 334 aa9.69□□□□□ -0.86
TM4SF1-204ENST00000493348 SPRYD7Q5W111 196 aa9.69□□□□□ -0.86
TM4SF1-204ENST00000493348 CCDC129Q6ZRS4 1044 aa9.69□□□□□ -0.86
TM4SF1-204ENST00000493348 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.69□□□□□ -0.86
TM4SF1-204ENST00000493348 IFNL3Q8IZI9 196 aa9.69□□□□□ -0.86
TM4SF1-204ENST00000493348 RAD50Q92878 1312 aa9.69□□□□□ -0.86
TM4SF1-204ENST00000493348 FAM227BQ96M60 508 aa9.69□□□□□ -0.86
TM4SF1-204ENST00000493348 TOMM22Q9NS69 142 aa9.69□□□□□ -0.86
TM4SF1-204ENST00000493348 ZNF112Q9UJU3 913 aa9.69□□□□□ -0.86
TM4SF1-204ENST00000493348 CEP350Q5VT06 3117 aa9.69□□□□□ -0.86
TM4SF1-204ENST00000493348 GSG1L2A8MUP6 293 aa9.68□□□□□ -0.86
TM4SF1-204ENST00000493348 PITPNM1O00562 1244 aa9.68□□□□□ -0.86
TM4SF1-204ENST00000493348 GDF11O95390 407 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms