RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 TTLL7Q6ZT98 887 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 WDR63Q8IWG1 891 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 ZNF296Q8WUU4 475 aaPredicted RBP3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 IRX2Q9BZI1 471 aaPredicted RBP3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 TANGO6Q9C0B7 1094 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 POLLQ9UGP5 575 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 STXBP5LQ9Y2K9 1186 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 ATRNL1Q5VV63 1379 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 SYNGAP1Q96PV0 1343 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 LTBP2Q14767 1821 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 SOWAHBA6NEL2 793 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 ZBTB7BO15156 539 aaPredicted RBP3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 GJB1P08034 283 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 GJA8P48165 433 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 FXR1P51114 621 aaKnown RBP eCLIP3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 UBXN2AP68543 259 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 CRTC2Q53ET0 693 aaPredicted RBP3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 XAGE3Q8WTP9 111 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 TRIM47Q96LD4 638 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 PRDM9Q9NQV7 894 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 U2SURPO15042 1029 aaKnown RBP3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 KCNQ3O43525 872 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 ENTPD3O75355 529 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 IGHMBP2P38935 993 aaKnown RBP3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 SP3Q02447 781 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 NEXNQ0ZGT2 675 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 PABPC4Q13310 644 aaKnown RBP eCLIP3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 FASTKD5Q7L8L6 764 aaKnown RBP3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 ERO1BQ86YB8 467 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 SLF2Q8IX21 1173 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 ZGPATQ8N5A5 531 aaKnown RBP3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 LINS1Q8NG48 757 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 TDRD7Q8NHU6 1098 aaKnown RBP3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 ZNF594Q96JF6 807 aaPredicted RBP3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 ZFRQ96KR1 1074 aaKnown RBP3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 ZDHHC15Q96MV8 337 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 PARK7Q99497 189 aaKnown RBP3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 VRTNQ9H8Y1 702 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 PTPRFP10586 1907 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 TRAF5O00463 557 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 CIAO1O76071 339 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 UFL1O94874 794 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 BRD1O95696 1058 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 SKIP12755 728 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 COPB2P35606 906 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 GCLCP48506 637 aaPredicted RBP3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 SERPINB4P48594 390 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 NT5C2P49902 561 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 CCT4P50991 539 aaKnown RBP3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 USP46P62068 366 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 NKX3-2P78367 333 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 HTRA3P83110 453 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 SNAPC2Q13487 334 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 RABL6Q3YEC7 729 aaPredicted RBP3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 LBX2Q6XYB7 198 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 NYAP1Q6ZVC0 841 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 SMIM5Q71RC9 77 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 ZNF341Q9BYN7 854 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 EFCC1Q9HA90 598 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 SYNPO2Q9UMS6 1093 aa3.46□□□□□ -1.86
DEPDC1-203ENST00000488146 TLR2O60603 784 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 MSCO60682 206 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 XRCC5P13010 732 aaKnown RBP3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 CTHP32929 405 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 GJA5P36382 358 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 PHLDB3Q6NSJ2 640 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 C17orf99Q6UX52 265 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 METTL16Q86W50 562 aaKnown RBP3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 TICAM2Q86XR7 235 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 OSBPL5Q9H0X9 879 aaPredicted RBP3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 ANO2Q9NQ90 1003 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 MORF4L1Q9UBU8 362 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 MINPP1Q9UNW1 487 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 PTPRCP08575 1304 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 WNT10BO00744 389 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 IGHA2P01877 340 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 BCRP11274 1271 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 FCGRTP55899 365 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 NCOA4Q13772 614 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 DLGAP5Q15398 846 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 MORN1Q5T089 497 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 ANGEL2Q5VTE6 544 aaKnown RBP3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 USP17L2Q6R6M4 530 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 TTLL11Q8NHH1 800 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 SOCS4Q8WXH5 440 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 SLC10A4Q96EP9 437 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 IDI2Q9BXS1 227 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 PAK6Q9NQU5 681 aaPredicted RBP3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 SRRDQ9UH36 339 aa3.45□□□□□ -1.86
DEPDC1-203ENST00000488146 LOC102724159A0A0B4J2E5 919 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 SASH1O94885 1247 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 HOXC6P09630 235 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 GCKRQ14397 625 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 PWP2Q15269 919 aaKnown RBP3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 MCM10Q7L590 875 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 FBXO33Q7Z6M2 555 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 WDR66Q8TBY9 1149 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 LRCH3Q96II8 777 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 GAKO14976 1311 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms