RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 TEX11Q8IYF3 940 aa23.1■■□□□ 1.29
GMDS-205ENST00000486793 ANKRD13CQ8N6S4 541 aa23.1■■□□□ 1.29
GMDS-205ENST00000486793 SGPL1O95470 568 aa23.09■■□□□ 1.29
GMDS-205ENST00000486793 CAP2P40123 477 aa23.09■■□□□ 1.29
GMDS-205ENST00000486793 PROCA1Q8NCQ7 364 aaPredicted RBP23.09■■□□□ 1.29
GMDS-205ENST00000486793 ZNF280CQ8ND82 737 aa23.09■■□□□ 1.29
GMDS-205ENST00000486793 PXYLP1Q8TE99 480 aa23.09■■□□□ 1.29
GMDS-205ENST00000486793 SH3RF3Q8TEJ3 882 aaPredicted RBP23.09■■□□□ 1.29
GMDS-205ENST00000486793 SNRKQ9NRH2 765 aa23.09■■□□□ 1.29
GMDS-205ENST00000486793 AK9Q5TCS8 1911 aa23.08■■□□□ 1.29
GMDS-205ENST00000486793 MYH13Q9UKX3 1938 aa23.08■■□□□ 1.29
GMDS-205ENST00000486793 INHAP05111 366 aa23.08■■□□□ 1.29
GMDS-205ENST00000486793 IRF5Q13568 498 aa23.08■■□□□ 1.29
GMDS-205ENST00000486793 CHRDL2Q6WN34 429 aa23.08■■□□□ 1.29
GMDS-205ENST00000486793 HMGCS2P54868 508 aa23.07■■□□□ 1.28
GMDS-205ENST00000486793 TMEM57Q8N5G2 664 aa23.07■■□□□ 1.28
GMDS-205ENST00000486793 COA7Q96BR5 231 aa23.07■■□□□ 1.28
GMDS-205ENST00000486793 HTATIP2Q9BUP3 242 aa23.07■■□□□ 1.28
GMDS-205ENST00000486793 PNMA3Q9UL41 463 aa23.07■■□□□ 1.28
GMDS-205ENST00000486793 TAOK2Q9UL54 1235 aa23.07■■□□□ 1.28
GMDS-205ENST00000486793 PI4KBQ9UBF8 816 aa23.06■■□□□ 1.28
GMDS-205ENST00000486793 RANBP2P49792 3224 aaKnown RBP23.06■■□□□ 1.28
GMDS-205ENST00000486793 USP17L5A8MUK1 530 aa23.05■■□□□ 1.28
GMDS-205ENST00000486793 FARP2O94887 1054 aaPredicted RBP23.05■■□□□ 1.28
GMDS-205ENST00000486793 TFRCP02786 760 aaKnown RBP23.05■■□□□ 1.28
GMDS-205ENST00000486793 FAM110CQ1W6H9 321 aa23.05■■□□□ 1.28
GMDS-205ENST00000486793 TTC39AQ5SRH9 613 aa23.05■■□□□ 1.28
GMDS-205ENST00000486793 NAA16Q6N069 864 aaPredicted RBP23.05■■□□□ 1.28
GMDS-205ENST00000486793 DEFB118Q96PH6 123 aa23.05■■□□□ 1.28
GMDS-205ENST00000486793 DBNDD2Q9BQY9 259 aa23.05■■□□□ 1.28
GMDS-205ENST00000486793 NOL10Q9BSC4 688 aaKnown RBP23.05■■□□□ 1.28
GMDS-205ENST00000486793 TBC1D2Q9BYX2 928 aa23.05■■□□□ 1.28
GMDS-205ENST00000486793 GPR108Q9NPR9 543 aa23.05■■□□□ 1.28
GMDS-205ENST00000486793 AATFQ9NY61 560 aaKnown RBP eCLIP23.05■■□□□ 1.28
GMDS-205ENST00000486793 HERC5Q9UII4 1024 aaKnown RBP23.05■■□□□ 1.28
GMDS-205ENST00000486793 MYH2Q9UKX2 1941 aa23.05■■□□□ 1.28
GMDS-205ENST00000486793 BAG3O95817 575 aa23.04■■□□□ 1.28
GMDS-205ENST00000486793 GCLCP48506 637 aaPredicted RBP23.04■■□□□ 1.28
GMDS-205ENST00000486793 PABPC4Q13310 644 aaKnown RBP eCLIP23.04■■□□□ 1.28
GMDS-205ENST00000486793 POLA2Q14181 598 aa23.04■■□□□ 1.28
GMDS-205ENST00000486793 TNNI3KQ59H18 835 aa23.04■■□□□ 1.28
GMDS-205ENST00000486793 CCDC158Q5M9N0 1113 aa23.04■■□□□ 1.28
GMDS-205ENST00000486793 ASCC2Q9H1I8 757 aaPredicted RBP23.04■■□□□ 1.28
GMDS-205ENST00000486793 DHX36Q9H2U1 1008 aaKnown RBP23.04■■□□□ 1.28
GMDS-205ENST00000486793 RBM27Q9P2N5 1060 aaKnown RBP23.04■■□□□ 1.28
GMDS-205ENST00000486793 FPGT-TNNI3KV9GXZ4 949 aa23.04■■□□□ 1.28
GMDS-205ENST00000486793 TRIOBPQ9H2D6 2365 aa23.03■■□□□ 1.28
GMDS-205ENST00000486793 CYP2E1P05181 493 aaPredicted RBP23.03■■□□□ 1.28
GMDS-205ENST00000486793 PPP4CP60510 307 aa23.03■■□□□ 1.28
GMDS-205ENST00000486793 ATP8B2P98198 1209 aa23.03■■□□□ 1.28
GMDS-205ENST00000486793 SH3D19Q5HYK7 790 aa23.03■■□□□ 1.28
GMDS-205ENST00000486793 TGFBRAP1Q8WUH2 860 aa23.03■■□□□ 1.28
GMDS-205ENST00000486793 NR2E3Q9Y5X4 410 aa23.03■■□□□ 1.28
GMDS-205ENST00000486793 COL2A1P02458 1487 aaPredicted RBP23.03■■□□□ 1.28
GMDS-205ENST00000486793 SURF6O75683 361 aaKnown RBP23.02■■□□□ 1.28
GMDS-205ENST00000486793 JAG1P78504 1218 aa23.02■■□□□ 1.28
GMDS-205ENST00000486793 OS9Q13438 667 aaPredicted RBP23.02■■□□□ 1.28
GMDS-205ENST00000486793 ZKSCAN2Q63HK3 967 aa23.02■■□□□ 1.28
GMDS-205ENST00000486793 ADGRA1Q86SQ6 560 aa23.02■■□□□ 1.28
GMDS-205ENST00000486793 MAPKAPK5Q8IW41 473 aa23.02■■□□□ 1.28
GMDS-205ENST00000486793 SSH3Q8TE77 659 aa23.02■■□□□ 1.28
GMDS-205ENST00000486793 WDR18Q9BV38 432 aa23.02■■□□□ 1.28
GMDS-205ENST00000486793 AS3MTQ9HBK9 375 aa23.02■■□□□ 1.28
GMDS-205ENST00000486793 PAK6Q9NQU5 681 aaPredicted RBP23.02■■□□□ 1.28
GMDS-205ENST00000486793 PLCG2P16885 1265 aa23.01■■□□□ 1.27
GMDS-205ENST00000486793 FOXP4Q8IVH2 680 aaPredicted RBP23.01■■□□□ 1.27
GMDS-205ENST00000486793 GJD2Q9UKL4 321 aa23.01■■□□□ 1.27
GMDS-205ENST00000486793 DOCK2Q92608 1830 aa23.01■■□□□ 1.27
GMDS-205ENST00000486793 CAPN2P17655 700 aa23■■□□□ 1.27
GMDS-205ENST00000486793 BACE1P56817 501 aa23■■□□□ 1.27
GMDS-205ENST00000486793 CRISPLD2Q9H0B8 497 aa23■■□□□ 1.27
GMDS-205ENST00000486793 C1orf115Q9H7X2 142 aa23■■□□□ 1.27
GMDS-205ENST00000486793 PALD1Q9ULE6 856 aa23■■□□□ 1.27
GMDS-205ENST00000486793 SZT2Q5T011 3432 aa22.99■■□□□ 1.27
GMDS-205ENST00000486793 ZBTB7BO15156 539 aaPredicted RBP22.99■■□□□ 1.27
GMDS-205ENST00000486793 ASNSP08243 561 aa22.99■■□□□ 1.27
GMDS-205ENST00000486793 ZAP70P43403 619 aa22.99■■□□□ 1.27
GMDS-205ENST00000486793 MTMR2Q13614 643 aa22.99■■□□□ 1.27
GMDS-205ENST00000486793 METTL16Q86W50 562 aaKnown RBP22.99■■□□□ 1.27
GMDS-205ENST00000486793 ZNF512BQ96KM6 892 aaPredicted RBP22.99■■□□□ 1.27
GMDS-205ENST00000486793 DNAJC18Q9H819 358 aa22.99■■□□□ 1.27
GMDS-205ENST00000486793 PIH1D3Q9NQM4 214 aaKnown RBP22.99■■□□□ 1.27
GMDS-205ENST00000486793 SHROOM1Q2M3G4 852 aaPredicted RBP22.98■■□□□ 1.27
GMDS-205ENST00000486793 P2RX7Q99572 595 aaKnown RBP22.98■■□□□ 1.27
GMDS-205ENST00000486793 PRO3102Q9H379 93 aa22.98■■□□□ 1.27
GMDS-205ENST00000486793 FLT1P17948 1338 aa22.98■■□□□ 1.27
GMDS-205ENST00000486793 EVI5O60447 810 aa22.97■■□□□ 1.27
GMDS-205ENST00000486793 DYNLL1P63167 89 aaKnown RBP22.97■■□□□ 1.27
GMDS-205ENST00000486793 CRACR2BQ8N4Y2 399 aaPredicted RBP22.97■■□□□ 1.27
GMDS-205ENST00000486793 PAWRQ96IZ0 340 aaKnown RBP22.97■■□□□ 1.27
GMDS-205ENST00000486793 TRIM34Q9BYJ4 488 aa22.97■■□□□ 1.27
GMDS-205ENST00000486793 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.97■■□□□ 1.27
GMDS-205ENST00000486793 TMOD4Q9NZQ9 345 aa22.97■■□□□ 1.27
GMDS-205ENST00000486793 MORF4L1Q9UBU8 362 aa22.97■■□□□ 1.27
GMDS-205ENST00000486793 SAP30BPQ9UHR5 308 aaKnown RBP22.97■■□□□ 1.27
GMDS-205ENST00000486793 DBNLQ9UJU6 430 aaKnown RBP22.97■■□□□ 1.27
GMDS-205ENST00000486793 NOP58Q9Y2X3 529 aaKnown RBP22.97■■□□□ 1.27
GMDS-205ENST00000486793 PEX10O60683 326 aa22.96■■□□□ 1.27
GMDS-205ENST00000486793 GDF11O95390 407 aa22.96■■□□□ 1.27
GMDS-205ENST00000486793 HOXA7P31268 230 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms