RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 NPM3O75607 178 aaKnown RBP14.71□□□□□ -0.05
TRA2B-213ENST00000485530 CWC27Q6UX04 472 aaKnown RBP14.71□□□□□ -0.05
TRA2B-213ENST00000485530 NOL10Q9BSC4 688 aaKnown RBP14.71□□□□□ -0.05
TRA2B-213ENST00000485530 R3HDMLQ9H3Y0 253 aa14.71□□□□□ -0.05
TRA2B-213ENST00000485530 HELLSQ9NRZ9 838 aa14.71□□□□□ -0.05
TRA2B-213ENST00000485530 POTEFA5A3E0 1075 aa14.7□□□□□ -0.06
TRA2B-213ENST00000485530 PLCG2P16885 1265 aa14.7□□□□□ -0.06
TRA2B-213ENST00000485530 FXR1P51114 621 aaKnown RBP eCLIP14.7□□□□□ -0.06
TRA2B-213ENST00000485530 MKRN3Q13064 507 aaKnown RBP14.7□□□□□ -0.06
TRA2B-213ENST00000485530 LRRFIP1Q32MZ4 808 aaKnown RBP14.7□□□□□ -0.06
TRA2B-213ENST00000485530 MCMDC2Q4G0Z9 681 aa14.7□□□□□ -0.06
TRA2B-213ENST00000485530 VPS53Q5VIR6 699 aa14.7□□□□□ -0.06
TRA2B-213ENST00000485530 OSBPL5Q9H0X9 879 aaPredicted RBP14.7□□□□□ -0.06
TRA2B-213ENST00000485530 DCP1AQ9NPI6 582 aaPredicted RBP14.7□□□□□ -0.06
TRA2B-213ENST00000485530 TMOD2Q9NZR1 351 aa14.7□□□□□ -0.06
TRA2B-213ENST00000485530 PALD1Q9ULE6 856 aa14.7□□□□□ -0.06
TRA2B-213ENST00000485530 MAST2Q6P0Q8 1798 aa14.7□□□□□ -0.06
TRA2B-213ENST00000485530 FLT1P17948 1338 aa14.69□□□□□ -0.06
TRA2B-213ENST00000485530 SREBF2Q12772 1141 aa14.69□□□□□ -0.06
TRA2B-213ENST00000485530 POTEDQ86YR6 584 aa14.69□□□□□ -0.06
TRA2B-213ENST00000485530 CRNKL1Q9BZJ0 848 aaKnown RBP14.69□□□□□ -0.06
TRA2B-213ENST00000485530 SAP30BPQ9UHR5 308 aaKnown RBP14.69□□□□□ -0.06
TRA2B-213ENST00000485530 SLC4A4Q9Y6R1 1079 aa14.69□□□□□ -0.06
TRA2B-213ENST00000485530 CYP2D7A0A087X1C5 515 aa14.68□□□□□ -0.06
TRA2B-213ENST00000485530 PATL2C9JE40 543 aaKnown RBP14.68□□□□□ -0.06
TRA2B-213ENST00000485530 CYP2D6P10635 497 aa14.68□□□□□ -0.06
TRA2B-213ENST00000485530 USP5P45974 858 aa14.68□□□□□ -0.06
TRA2B-213ENST00000485530 TNNI2P48788 182 aa14.68□□□□□ -0.06
TRA2B-213ENST00000485530 PLCD1P51178 756 aa14.68□□□□□ -0.06
TRA2B-213ENST00000485530 TNFAIP1Q13829 316 aa14.68□□□□□ -0.06
TRA2B-213ENST00000485530 SLC4A8Q2Y0W8 1093 aa14.68□□□□□ -0.06
TRA2B-213ENST00000485530 MIGA2Q7L4E1 593 aa14.68□□□□□ -0.06
TRA2B-213ENST00000485530 EPB41L4AQ9HCS5 686 aaPredicted RBP14.68□□□□□ -0.06
TRA2B-213ENST00000485530 DIAPH3Q9NSV4 1193 aa14.68□□□□□ -0.06
TRA2B-213ENST00000485530 PPP2R3BQ9Y5P8 575 aa14.68□□□□□ -0.06
TRA2B-213ENST00000485530 SSC5DA1L4H1 1573 aa14.68□□□□□ -0.06
TRA2B-213ENST00000485530 HIP1O00291 1037 aa14.67□□□□□ -0.06
TRA2B-213ENST00000485530 USP2O75604 605 aaPredicted RBP14.67□□□□□ -0.06
TRA2B-213ENST00000485530 MAP3K10Q02779 954 aa14.67□□□□□ -0.06
TRA2B-213ENST00000485530 TTLL12Q14166 644 aaPredicted RBP14.67□□□□□ -0.06
TRA2B-213ENST00000485530 CTR9Q6PD62 1173 aa14.67□□□□□ -0.06
TRA2B-213ENST00000485530 OTOP1Q7RTM1 612 aa14.67□□□□□ -0.06
TRA2B-213ENST00000485530 CERS3Q8IU89 383 aa14.67□□□□□ -0.06
TRA2B-213ENST00000485530 ATRNL1Q5VV63 1379 aa14.67□□□□□ -0.06
TRA2B-213ENST00000485530 USP17L12C9JPN9 530 aa14.66□□□□□ -0.06
TRA2B-213ENST00000485530 USP17L21D6R901 530 aa14.66□□□□□ -0.06
TRA2B-213ENST00000485530 SGSM2O43147 1006 aa14.66□□□□□ -0.06
TRA2B-213ENST00000485530 PRKG1Q13976 671 aa14.66□□□□□ -0.06
TRA2B-213ENST00000485530 RRP1BQ14684 758 aaKnown RBP14.66□□□□□ -0.06
TRA2B-213ENST00000485530 METTL16Q86W50 562 aaKnown RBP14.66□□□□□ -0.06
TRA2B-213ENST00000485530 IFNL3Q8IZI9 196 aa14.66□□□□□ -0.06
TRA2B-213ENST00000485530 ATP8A2Q9NTI2 1148 aa14.66□□□□□ -0.06
TRA2B-213ENST00000485530 TRIM17Q9Y577 477 aa14.66□□□□□ -0.06
TRA2B-213ENST00000485530 MYH7P12883 1935 aa14.66□□□□□ -0.06
TRA2B-213ENST00000485530 ECM29Q5VYK3 1845 aa14.66□□□□□ -0.06
TRA2B-213ENST00000485530 LAMB1P07942 1786 aa14.65□□□□□ -0.06
TRA2B-213ENST00000485530 RPAP1Q9BWH6 1393 aaPredicted RBP14.65□□□□□ -0.06
TRA2B-213ENST00000485530 FAM196BA6NMK8 535 aa14.65□□□□□ -0.06
TRA2B-213ENST00000485530 HSPD1P10809 573 aaKnown RBP14.65□□□□□ -0.06
TRA2B-213ENST00000485530 NF2P35240 595 aa14.65□□□□□ -0.06
TRA2B-213ENST00000485530 PTH1RQ03431 593 aa14.65□□□□□ -0.06
TRA2B-213ENST00000485530 SUPT20HL1Q3ZLR7 823 aa14.65□□□□□ -0.06
TRA2B-213ENST00000485530 ZSCAN29Q8IWY8 852 aaPredicted RBP14.65□□□□□ -0.06
TRA2B-213ENST00000485530 MCM9Q9NXL9 1143 aa14.65□□□□□ -0.06
TRA2B-213ENST00000485530 TACC3Q9Y6A5 838 aa14.65□□□□□ -0.06
TRA2B-213ENST00000485530 SZT2Q5T011 3432 aa14.65□□□□□ -0.06
TRA2B-213ENST00000485530 CCDC171Q6TFL3 1326 aa14.65□□□□□ -0.06
TRA2B-213ENST00000485530 PHF20L1A8MW92 1017 aa14.64□□□□□ -0.07
TRA2B-213ENST00000485530 FGAP02671 866 aa14.64□□□□□ -0.07
TRA2B-213ENST00000485530 APPP05067 770 aa14.64□□□□□ -0.07
TRA2B-213ENST00000485530 GNAT2P19087 354 aa14.64□□□□□ -0.07
TRA2B-213ENST00000485530 JAG1P78504 1218 aa14.64□□□□□ -0.07
TRA2B-213ENST00000485530 ALX1Q15699 326 aa14.64□□□□□ -0.07
TRA2B-213ENST00000485530 C12orf60Q5U649 245 aa14.64□□□□□ -0.07
TRA2B-213ENST00000485530 SPRYD7Q5W111 196 aa14.64□□□□□ -0.07
TRA2B-213ENST00000485530 GIMAP6Q6P9H5 292 aa14.64□□□□□ -0.07
TRA2B-213ENST00000485530 ESYT1Q9BSJ8 1104 aa14.64□□□□□ -0.07
TRA2B-213ENST00000485530 DNAJC18Q9H819 358 aa14.64□□□□□ -0.07
TRA2B-213ENST00000485530 PI4KBQ9UBF8 816 aa14.64□□□□□ -0.07
TRA2B-213ENST00000485530 CDK5RAP2Q96SN8 1893 aa14.63□□□□□ -0.07
TRA2B-213ENST00000485530 CDC45O75419 566 aa14.63□□□□□ -0.07
TRA2B-213ENST00000485530 ALDH1A1P00352 501 aa14.63□□□□□ -0.07
TRA2B-213ENST00000485530 GABPAQ06546 454 aa14.63□□□□□ -0.07
TRA2B-213ENST00000485530 SBK1Q52WX2 424 aa14.63□□□□□ -0.07
TRA2B-213ENST00000485530 LDLRAD1Q5T700 205 aa14.63□□□□□ -0.07
TRA2B-213ENST00000485530 FOXP4Q8IVH2 680 aaPredicted RBP14.63□□□□□ -0.07
TRA2B-213ENST00000485530 DYNLL2Q96FJ2 89 aa14.63□□□□□ -0.07
TRA2B-213ENST00000485530 DHX36Q9H2U1 1008 aaKnown RBP14.63□□□□□ -0.07
TRA2B-213ENST00000485530 INCENPQ9NQS7 918 aa14.63□□□□□ -0.07
TRA2B-213ENST00000485530 ZNF112Q9UJU3 913 aa14.63□□□□□ -0.07
TRA2B-213ENST00000485530 KIAA0100Q14667 2235 aaKnown RBP14.62□□□□□ -0.07
TRA2B-213ENST00000485530 TBC1D12O60347 775 aa14.62□□□□□ -0.07
TRA2B-213ENST00000485530 POLR3DP05423 398 aaPredicted RBP14.62□□□□□ -0.07
TRA2B-213ENST00000485530 MAP3K11Q16584 847 aa14.62□□□□□ -0.07
TRA2B-213ENST00000485530 SHROOM1Q2M3G4 852 aaPredicted RBP14.62□□□□□ -0.07
TRA2B-213ENST00000485530 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.62□□□□□ -0.07
TRA2B-213ENST00000485530 ARMC9Q7Z3E5 817 aa14.62□□□□□ -0.07
TRA2B-213ENST00000485530 IFNL1Q8IU54 200 aa14.62□□□□□ -0.07
TRA2B-213ENST00000485530 ARMC5Q96C12 935 aa14.62□□□□□ -0.07
TRA2B-213ENST00000485530 ANGEL1Q9UNK9 670 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms