RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 SLF2Q8IX21 1173 aa21.58■■□□□ 1.05
RXRB-203ENST00000481441 HMX1Q9NP08 348 aaPredicted RBP21.58■■□□□ 1.05
RXRB-203ENST00000481441 ABCF2Q9UG63 623 aa21.58■■□□□ 1.05
RXRB-203ENST00000481441 MROH7-TTC4A0A0A0MT08 1334 aa21.57■■□□□ 1.04
RXRB-203ENST00000481441 FAM196BA6NMK8 535 aa21.57■■□□□ 1.04
RXRB-203ENST00000481441 SYN1P17600 705 aa21.57■■□□□ 1.04
RXRB-203ENST00000481441 IL15P40933 162 aaPredicted RBP21.57■■□□□ 1.04
RXRB-203ENST00000481441 MAGEA10P43363 369 aaPredicted RBP21.57■■□□□ 1.04
RXRB-203ENST00000481441 RHBDL3P58872 404 aa21.57■■□□□ 1.04
RXRB-203ENST00000481441 SPP2Q13103 211 aa21.57■■□□□ 1.04
RXRB-203ENST00000481441 STXBP5LQ9Y2K9 1186 aa21.57■■□□□ 1.04
RXRB-203ENST00000481441 GPR75-ASB3A0A0A6YYF3 556 aa21.56■■□□□ 1.04
RXRB-203ENST00000481441 NPM3O75607 178 aaKnown RBP21.56■■□□□ 1.04
RXRB-203ENST00000481441 TDHQ8IZJ6 230 aa21.56■■□□□ 1.04
RXRB-203ENST00000481441 ZNF280CQ8ND82 737 aa21.56■■□□□ 1.04
RXRB-203ENST00000481441 OSBPL5Q9H0X9 879 aaPredicted RBP21.56■■□□□ 1.04
RXRB-203ENST00000481441 C11orf49Q9H6J7 331 aa21.56■■□□□ 1.04
RXRB-203ENST00000481441 MTMR10Q9NXD2 777 aa21.56■■□□□ 1.04
RXRB-203ENST00000481441 OGDHLQ9ULD0 1010 aa21.56■■□□□ 1.04
RXRB-203ENST00000481441 HMGCS2P54868 508 aa21.55■■□□□ 1.04
RXRB-203ENST00000481441 PABPC4Q13310 644 aaKnown RBP eCLIP21.55■■□□□ 1.04
RXRB-203ENST00000481441 ZNF384Q8TF68 577 aa21.55■■□□□ 1.04
RXRB-203ENST00000481441 TRIB2Q92519 343 aa21.55■■□□□ 1.04
RXRB-203ENST00000481441 ASCC2Q9H1I8 757 aaPredicted RBP21.55■■□□□ 1.04
RXRB-203ENST00000481441 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.55■■□□□ 1.04
RXRB-203ENST00000481441 MAP3K21Q5TCX8 1036 aa21.55■■□□□ 1.04
RXRB-203ENST00000481441 SPTY2D1Q68D10 685 aaPredicted RBP21.55■■□□□ 1.04
RXRB-203ENST00000481441 TBC1D2Q9BYX2 928 aa21.55■■□□□ 1.04
RXRB-203ENST00000481441 MORF4L1Q9UBU8 362 aa21.55■■□□□ 1.04
RXRB-203ENST00000481441 PA2G4Q9UQ80 394 aaKnown RBP21.55■■□□□ 1.04
RXRB-203ENST00000481441 COL2A1P02458 1487 aaPredicted RBP21.54■■□□□ 1.04
RXRB-203ENST00000481441 UBTFL1P0CB47 393 aaPredicted RBP21.54■■□□□ 1.04
RXRB-203ENST00000481441 MECOMQ03112 1051 aa21.54■■□□□ 1.04
RXRB-203ENST00000481441 RRP1BQ14684 758 aaKnown RBP21.54■■□□□ 1.04
RXRB-203ENST00000481441 SH3D19Q5HYK7 790 aa21.54■■□□□ 1.04
RXRB-203ENST00000481441 PFASO15067 1338 aa21.53■■□□□ 1.04
RXRB-203ENST00000481441 CAP2P40123 477 aa21.53■■□□□ 1.04
RXRB-203ENST00000481441 TIMM10P62072 90 aa21.53■■□□□ 1.04
RXRB-203ENST00000481441 COPRSQ9NQ92 184 aa21.53■■□□□ 1.04
RXRB-203ENST00000481441 FAM9BQ8IZU0 186 aa21.52■■□□□ 1.03
RXRB-203ENST00000481441 UBE2OQ9C0C9 1292 aaKnown RBP21.52■■□□□ 1.03
RXRB-203ENST00000481441 USP17L5A8MUK1 530 aa21.51■■□□□ 1.03
RXRB-203ENST00000481441 CYP2B6P20813 491 aa21.51■■□□□ 1.03
RXRB-203ENST00000481441 ERICH6Q7L0X2 663 aa21.51■■□□□ 1.03
RXRB-203ENST00000481441 ANP32CO43423 234 aa21.5■■□□□ 1.03
RXRB-203ENST00000481441 MAP4K4O95819 1239 aaPredicted RBP21.5■■□□□ 1.03
RXRB-203ENST00000481441 COL6A1P12109 1028 aa21.5■■□□□ 1.03
RXRB-203ENST00000481441 XRCC5P13010 732 aaKnown RBP21.5■■□□□ 1.03
RXRB-203ENST00000481441 PRKAR2AP13861 404 aaKnown RBP21.5■■□□□ 1.03
RXRB-203ENST00000481441 SIPA1L1O43166 1804 aa21.49■■□□□ 1.03
RXRB-203ENST00000481441 NSUN4Q96CB9 384 aaKnown RBP21.49■■□□□ 1.03
RXRB-203ENST00000481441 XAGE2Q96GT9 111 aa21.49■■□□□ 1.03
RXRB-203ENST00000481441 AS3MTQ9HBK9 375 aa21.49■■□□□ 1.03
RXRB-203ENST00000481441 A0A1B0GUL7 405 aa21.48■■□□□ 1.03
RXRB-203ENST00000481441 PEX10O60683 326 aa21.48■■□□□ 1.03
RXRB-203ENST00000481441 HOXA7P31268 230 aaPredicted RBP21.48■■□□□ 1.03
RXRB-203ENST00000481441 ALDH1L2Q3SY69 923 aa21.48■■□□□ 1.03
RXRB-203ENST00000481441 P2RX7Q99572 595 aaKnown RBP21.48■■□□□ 1.03
RXRB-203ENST00000481441 NUDT12Q9BQG2 462 aa21.48■■□□□ 1.03
RXRB-203ENST00000481441 WDR18Q9BV38 432 aa21.48■■□□□ 1.03
RXRB-203ENST00000481441 TXNRD2Q9NNW7 524 aa21.48■■□□□ 1.03
RXRB-203ENST00000481441 HERC5Q9UII4 1024 aaKnown RBP21.48■■□□□ 1.03
RXRB-203ENST00000481441 E9PSI1 815 aa21.47■■□□□ 1.03
RXRB-203ENST00000481441 LDHCP07864 332 aa21.47■■□□□ 1.03
RXRB-203ENST00000481441 BACE1P56817 501 aa21.47■■□□□ 1.03
RXRB-203ENST00000481441 IRX3P78415 501 aaPredicted RBP21.47■■□□□ 1.03
RXRB-203ENST00000481441 MVPQ14764 893 aaKnown RBP21.47■■□□□ 1.03
RXRB-203ENST00000481441 SOCS4Q8WXH5 440 aa21.47■■□□□ 1.03
RXRB-203ENST00000481441 HMG20BQ9P0W2 317 aa21.47■■□□□ 1.03
RXRB-203ENST00000481441 FRMPD3Q5JV73 1810 aa21.46■■□□□ 1.03
RXRB-203ENST00000481441 GSTO1P78417 241 aa21.46■■□□□ 1.03
RXRB-203ENST00000481441 CACNB2Q08289 660 aaPredicted RBP21.46■■□□□ 1.03
RXRB-203ENST00000481441 MTMR2Q13614 643 aa21.46■■□□□ 1.03
RXRB-203ENST00000481441 LHX8Q68G74 356 aa21.46■■□□□ 1.03
RXRB-203ENST00000481441 GPRC5AQ8NFJ5 357 aa21.46■■□□□ 1.03
RXRB-203ENST00000481441 USP6NLQ92738 828 aa21.46■■□□□ 1.03
RXRB-203ENST00000481441 COL25A1Q9BXS0 654 aaPredicted RBP21.46■■□□□ 1.03
RXRB-203ENST00000481441 HDAC5Q9UQL6 1122 aa21.46■■□□□ 1.03
RXRB-203ENST00000481441 AKAP2Q9Y2D5 859 aa21.46■■□□□ 1.03
RXRB-203ENST00000481441 HERVK_113P62684 666 aa21.45■■□□□ 1.02
RXRB-203ENST00000481441 TFCP2Q12800 502 aa21.45■■□□□ 1.02
RXRB-203ENST00000481441 LRRC26Q2I0M4 334 aa21.45■■□□□ 1.02
RXRB-203ENST00000481441 PI16Q6UXB8 463 aa21.45■■□□□ 1.02
RXRB-203ENST00000481441 TBC1D9Q6ZT07 1266 aa21.45■■□□□ 1.02
RXRB-203ENST00000481441 TRMT44Q8IYL2 757 aaKnown RBP21.45■■□□□ 1.02
RXRB-203ENST00000481441 SMC4Q9NTJ3 1288 aa21.45■■□□□ 1.02
RXRB-203ENST00000481441 RBPJLQ9UBG7 517 aa21.45■■□□□ 1.02
RXRB-203ENST00000481441 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.45■■□□□ 1.02
RXRB-203ENST00000481441 ZKSCAN1P17029 563 aaPredicted RBP21.44■■□□□ 1.02
RXRB-203ENST00000481441 CCND3P30281 292 aaPredicted RBP21.44■■□□□ 1.02
RXRB-203ENST00000481441 JAG1P78504 1218 aa21.44■■□□□ 1.02
RXRB-203ENST00000481441 TEX11Q8IYF3 940 aa21.44■■□□□ 1.02
RXRB-203ENST00000481441 SPATA5Q8NB90 893 aa21.44■■□□□ 1.02
RXRB-203ENST00000481441 TMOD4Q9NZQ9 345 aa21.44■■□□□ 1.02
RXRB-203ENST00000481441 PI4KBQ9UBF8 816 aa21.44■■□□□ 1.02
RXRB-203ENST00000481441 CDK5RAP2Q96SN8 1893 aa21.44■■□□□ 1.02
RXRB-203ENST00000481441 POTEB2H3BUK9 544 aa21.43■■□□□ 1.02
RXRB-203ENST00000481441 MAPK4P31152 587 aa21.43■■□□□ 1.02
RXRB-203ENST00000481441 MDM2Q00987 491 aaPredicted RBP21.43■■□□□ 1.02
RXRB-203ENST00000481441 SLFN5Q08AF3 891 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 219.4 ms