RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 IPO4Q8TEX9 1081 aaKnown RBP16.33■□□□□ 0.2
NR1H3-220ENST00000481020 VIPAS39Q9H9C1 493 aa16.33■□□□□ 0.2
NR1H3-220ENST00000481020 AXIN2Q9Y2T1 843 aa16.33■□□□□ 0.2
NR1H3-220ENST00000481020 CTAGE9A4FU28 777 aa16.32■□□□□ 0.2
NR1H3-220ENST00000481020 BMP15O95972 392 aa16.32■□□□□ 0.2
NR1H3-220ENST00000481020 IFNAR1P17181 557 aa16.32■□□□□ 0.2
NR1H3-220ENST00000481020 PIP4K2AP48426 406 aaPredicted RBP16.32■□□□□ 0.2
NR1H3-220ENST00000481020 SSRP1Q08945 709 aaKnown RBP16.32■□□□□ 0.2
NR1H3-220ENST00000481020 TRIM28Q13263 835 aaKnown RBP16.32■□□□□ 0.2
NR1H3-220ENST00000481020 CCDC57Q2TAC2 916 aa16.32■□□□□ 0.2
NR1H3-220ENST00000481020 FAM71BQ8TC56 605 aa16.32■□□□□ 0.2
NR1H3-220ENST00000481020 XAGE2Q96GT9 111 aa16.32■□□□□ 0.2
NR1H3-220ENST00000481020 CNNM2Q9H8M5 875 aa16.32■□□□□ 0.2
NR1H3-220ENST00000481020 FBXO2Q9UK22 296 aaPredicted RBP16.32■□□□□ 0.2
NR1H3-220ENST00000481020 L1RE1Q9UN81 338 aa16.32■□□□□ 0.2
NR1H3-220ENST00000481020 SRPRBQ9Y5M8 271 aaKnown RBP16.32■□□□□ 0.2
NR1H3-220ENST00000481020 PBX1P40424 430 aa16.31■□□□□ 0.2
NR1H3-220ENST00000481020 HAND2P61296 217 aa16.31■□□□□ 0.2
NR1H3-220ENST00000481020 PDE4BQ07343 736 aa16.31■□□□□ 0.2
NR1H3-220ENST00000481020 PPP2R5BQ15173 497 aa16.31■□□□□ 0.2
NR1H3-220ENST00000481020 LRRC24Q50LG9 513 aa16.31■□□□□ 0.2
NR1H3-220ENST00000481020 ISM2Q6H9L7 571 aa16.31■□□□□ 0.2
NR1H3-220ENST00000481020 TMTC1Q8IUR5 882 aa16.31■□□□□ 0.2
NR1H3-220ENST00000481020 STRCQ7RTU9 1775 aa16.31■□□□□ 0.2
NR1H3-220ENST00000481020 CCDC196A0A1B0GTZ2 297 aa16.31■□□□□ 0.2
NR1H3-220ENST00000481020 MMP1P03956 469 aa16.31■□□□□ 0.2
NR1H3-220ENST00000481020 ADD2P35612 726 aa16.31■□□□□ 0.2
NR1H3-220ENST00000481020 CABP4P57796 275 aa16.31■□□□□ 0.2
NR1H3-220ENST00000481020 HSP90B2PQ58FF3 399 aa16.31■□□□□ 0.2
NR1H3-220ENST00000481020 WDR93Q6P2C0 686 aa16.31■□□□□ 0.2
NR1H3-220ENST00000481020 AEBP2Q6ZN18 517 aaPredicted RBP16.31■□□□□ 0.2
NR1H3-220ENST00000481020 SRLQ86TD4 932 aa16.31■□□□□ 0.2
NR1H3-220ENST00000481020 TRIM22Q8IYM9 498 aa16.31■□□□□ 0.2
NR1H3-220ENST00000481020 CTCFLQ8NI51 663 aaPredicted RBP16.31■□□□□ 0.2
NR1H3-220ENST00000481020 PYM1Q9BRP8 204 aaKnown RBP16.31■□□□□ 0.2
NR1H3-220ENST00000481020 ANKZF1Q9H8Y5 726 aa16.31■□□□□ 0.2
NR1H3-220ENST00000481020 UBN2Q6ZU65 1347 aa16.3■□□□□ 0.2
NR1H3-220ENST00000481020 GOLGA8AA7E2F4 631 aa16.3■□□□□ 0.2
NR1H3-220ENST00000481020 MYO1CO00159 1063 aa16.3■□□□□ 0.2
NR1H3-220ENST00000481020 ADKP55263 362 aaKnown RBP16.3■□□□□ 0.2
NR1H3-220ENST00000481020 FAM177A1Q8N128 213 aaPredicted RBP16.3■□□□□ 0.2
NR1H3-220ENST00000481020 STK11IPQ8N1F8 1099 aa16.3■□□□□ 0.2
NR1H3-220ENST00000481020 TMTC2Q8N394 836 aa16.3■□□□□ 0.2
NR1H3-220ENST00000481020 IGDCC4Q8TDY8 1250 aa16.3■□□□□ 0.2
NR1H3-220ENST00000481020 GSDMAQ96QA5 445 aa16.3■□□□□ 0.2
NR1H3-220ENST00000481020 PUS7LQ9H0K6 701 aaKnown RBP16.3■□□□□ 0.2
NR1H3-220ENST00000481020 LRP6O75581 1613 aa16.3■□□□□ 0.2
NR1H3-220ENST00000481020 MEGF6O75095 1541 aa16.3■□□□□ 0.2
NR1H3-220ENST00000481020 STRCP1A6NGW2 1772 aa16.29■□□□□ 0.2
NR1H3-220ENST00000481020 MFAP3LO75121 409 aa16.29■□□□□ 0.2
NR1H3-220ENST00000481020 PPFIA3O75145 1194 aa16.29■□□□□ 0.2
NR1H3-220ENST00000481020 CDC27P30260 824 aa16.29■□□□□ 0.2
NR1H3-220ENST00000481020 LMAN1P49257 510 aa16.29■□□□□ 0.2
NR1H3-220ENST00000481020 SPAG1Q07617 926 aa16.29■□□□□ 0.2
NR1H3-220ENST00000481020 CDKAL1Q5VV42 579 aa16.29■□□□□ 0.2
NR1H3-220ENST00000481020 RPGRIP1Q96KN7 1286 aa16.29■□□□□ 0.2
NR1H3-220ENST00000481020 CLIC6Q96NY7 704 aa16.29■□□□□ 0.2
NR1H3-220ENST00000481020 GJB4Q9NTQ9 266 aa16.29■□□□□ 0.2
NR1H3-220ENST00000481020 WWC3Q9ULE0 1092 aa16.29■□□□□ 0.2
NR1H3-220ENST00000481020 CTAGE15A4D2H0 777 aa16.28■□□□□ 0.2
NR1H3-220ENST00000481020 ZBTB22O15209 634 aa16.28■□□□□ 0.2
NR1H3-220ENST00000481020 ACTN4O43707 911 aaKnown RBP16.28■□□□□ 0.2
NR1H3-220ENST00000481020 CTAGE8P0CG41 777 aa16.28■□□□□ 0.2
NR1H3-220ENST00000481020 FMR1Q06787 632 aaKnown RBP eCLIP16.28■□□□□ 0.2
NR1H3-220ENST00000481020 MAP9Q49MG5 647 aa16.28■□□□□ 0.2
NR1H3-220ENST00000481020 CTAGE6Q86UF2 777 aa16.28■□□□□ 0.2
NR1H3-220ENST00000481020 CTAGE4Q8IX94 777 aa16.28■□□□□ 0.2
NR1H3-220ENST00000481020 IGSF22Q8N9C0 903 aa16.28■□□□□ 0.2
NR1H3-220ENST00000481020 NAPGQ99747 312 aaPredicted RBP16.28■□□□□ 0.2
NR1H3-220ENST00000481020 ISCA1Q9BUE6 129 aa16.28■□□□□ 0.2
NR1H3-220ENST00000481020 KRT23Q9C075 422 aa16.28■□□□□ 0.2
NR1H3-220ENST00000481020 MRPL44Q9H9J2 332 aaKnown RBP16.28■□□□□ 0.2
NR1H3-220ENST00000481020 LY9Q9HBG7 655 aa16.28■□□□□ 0.2
NR1H3-220ENST00000481020 ZCCHC17Q9NP64 241 aaKnown RBP16.28■□□□□ 0.2
NR1H3-220ENST00000481020 AATFQ9NY61 560 aaKnown RBP eCLIP16.28■□□□□ 0.2
NR1H3-220ENST00000481020 ADD3Q9UEY8 706 aaKnown RBP16.28■□□□□ 0.2
NR1H3-220ENST00000481020 MYH7P12883 1935 aa16.28■□□□□ 0.2
NR1H3-220ENST00000481020 ALS2Q96Q42 1657 aa16.28■□□□□ 0.2
NR1H3-220ENST00000481020 H3BQF6 201 aa16.28■□□□□ 0.2
NR1H3-220ENST00000481020 DEXIO95424 95 aa16.28■□□□□ 0.2
NR1H3-220ENST00000481020 SF3B2Q13435 895 aaKnown RBP16.28■□□□□ 0.2
NR1H3-220ENST00000481020 APTXQ7Z2E3 356 aaKnown RBP16.28■□□□□ 0.2
NR1H3-220ENST00000481020 NBPF3Q9H094 633 aa16.28■□□□□ 0.2
NR1H3-220ENST00000481020 FAM107BQ9H098 131 aa16.28■□□□□ 0.2
NR1H3-220ENST00000481020 NLRP2Q9NX02 1062 aa16.28■□□□□ 0.2
NR1H3-220ENST00000481020 SLC12A7Q9Y666 1083 aa16.28■□□□□ 0.2
NR1H3-220ENST00000481020 TIAM2Q8IVF5 1701 aa16.27■□□□□ 0.19
NR1H3-220ENST00000481020 DCCP43146 1447 aa16.27■□□□□ 0.19
NR1H3-220ENST00000481020 LRRC10BA6NIK2 292 aa16.27■□□□□ 0.19
NR1H3-220ENST00000481020 NBPF26B4DH59 902 aa16.27■□□□□ 0.19
NR1H3-220ENST00000481020 POLR2DO15514 142 aaKnown RBP16.27■□□□□ 0.19
NR1H3-220ENST00000481020 CSF1RP07333 972 aa16.27■□□□□ 0.19
NR1H3-220ENST00000481020 ZAP70P43403 619 aa16.27■□□□□ 0.19
NR1H3-220ENST00000481020 SEMA3FQ13275 785 aa16.27■□□□□ 0.19
NR1H3-220ENST00000481020 KIF4BQ2VIQ3 1234 aa16.27■□□□□ 0.19
NR1H3-220ENST00000481020 NBPF14Q5TI25 921 aa16.27■□□□□ 0.19
NR1H3-220ENST00000481020 NBPF10Q6P3W6 841 aaKnown RBP16.27■□□□□ 0.19
NR1H3-220ENST00000481020 NFXL1Q6ZNB6 911 aa16.27■□□□□ 0.19
NR1H3-220ENST00000481020 CYB5R4Q7L1T6 521 aa16.27■□□□□ 0.19
NR1H3-220ENST00000481020 NBPF15Q8N660 670 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms