RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 SMC4Q9NTJ3 1288 aa19.34■□□□□ 0.69
HDLBP-238ENST00000479894 RFX7Q2KHR2 1363 aa19.33■□□□□ 0.69
HDLBP-238ENST00000479894 UTYO14607 1347 aa19.33■□□□□ 0.69
HDLBP-238ENST00000479894 LTBP2Q14767 1821 aa19.33■□□□□ 0.69
HDLBP-238ENST00000479894 XRCC5P13010 732 aaKnown RBP19.33■□□□□ 0.68
HDLBP-238ENST00000479894 RGS3P49796 1198 aa19.33■□□□□ 0.68
HDLBP-238ENST00000479894 TREML2Q5T2D2 321 aa19.33■□□□□ 0.68
HDLBP-238ENST00000479894 TRMT44Q8IYL2 757 aaKnown RBP19.33■□□□□ 0.68
HDLBP-238ENST00000479894 MAFAQ8NHW3 353 aaPredicted RBP19.33■□□□□ 0.68
HDLBP-238ENST00000479894 FAM161BQ96MY7 647 aa19.33■□□□□ 0.68
HDLBP-238ENST00000479894 TBC1D2Q9BYX2 928 aa19.33■□□□□ 0.68
HDLBP-238ENST00000479894 PTPRCP08575 1304 aa19.32■□□□□ 0.68
HDLBP-238ENST00000479894 SALL1Q9NSC2 1324 aa19.32■□□□□ 0.68
HDLBP-238ENST00000479894 LDHBP07195 334 aaKnown RBP19.32■□□□□ 0.68
HDLBP-238ENST00000479894 PRKAR2AP13861 404 aaKnown RBP19.32■□□□□ 0.68
HDLBP-238ENST00000479894 PRDX5P30044 214 aa19.32■□□□□ 0.68
HDLBP-238ENST00000479894 RARSP54136 660 aaKnown RBP19.32■□□□□ 0.68
HDLBP-238ENST00000479894 LRRC26Q2I0M4 334 aa19.32■□□□□ 0.68
HDLBP-238ENST00000479894 CDX2Q99626 313 aaPredicted RBP19.32■□□□□ 0.68
HDLBP-238ENST00000479894 LBHD1Q9BQE6 289 aaPredicted RBP19.32■□□□□ 0.68
HDLBP-238ENST00000479894 MORF4L1Q9UBU8 362 aa19.32■□□□□ 0.68
HDLBP-238ENST00000479894 SH3BP5LQ7L8J4 393 aa19.31■□□□□ 0.68
HDLBP-238ENST00000479894 SOCS4Q8WXH5 440 aa19.31■□□□□ 0.68
HDLBP-238ENST00000479894 SSH1Q8WYL5 1049 aa19.31■□□□□ 0.68
HDLBP-238ENST00000479894 BICC1Q9H694 974 aaKnown RBP19.31■□□□□ 0.68
HDLBP-238ENST00000479894 TBC1D12O60347 775 aa19.3■□□□□ 0.68
HDLBP-238ENST00000479894 SLC5A1P13866 664 aa19.3■□□□□ 0.68
HDLBP-238ENST00000479894 ZSCAN29Q8IWY8 852 aaPredicted RBP19.3■□□□□ 0.68
HDLBP-238ENST00000479894 LPIN2Q92539 896 aa19.3■□□□□ 0.68
HDLBP-238ENST00000479894 NUDT12Q9BQG2 462 aa19.3■□□□□ 0.68
HDLBP-238ENST00000479894 RCAN3Q9UKA8 241 aa19.3■□□□□ 0.68
HDLBP-238ENST00000479894 MUC3AQ02505 3323 aa19.3■□□□□ 0.68
HDLBP-238ENST00000479894 ZBTB22O15209 634 aa19.29■□□□□ 0.68
HDLBP-238ENST00000479894 NBPF7P0C2Y1 421 aaPredicted RBP19.29■□□□□ 0.68
HDLBP-238ENST00000479894 MS4A1P11836 297 aa19.29■□□□□ 0.68
HDLBP-238ENST00000479894 CYP2B6P20813 491 aa19.29■□□□□ 0.68
HDLBP-238ENST00000479894 LHX8Q68G74 356 aa19.29■□□□□ 0.68
HDLBP-238ENST00000479894 MRPL50Q8N5N7 158 aaKnown RBP19.29■□□□□ 0.68
HDLBP-238ENST00000479894 ARHGAP45Q92619 1136 aa19.29■□□□□ 0.68
HDLBP-238ENST00000479894 OSBPL5Q9H0X9 879 aaPredicted RBP19.29■□□□□ 0.68
HDLBP-238ENST00000479894 ASCC2Q9H1I8 757 aaPredicted RBP19.29■□□□□ 0.68
HDLBP-238ENST00000479894 GAKO14976 1311 aa19.28■□□□□ 0.68
HDLBP-238ENST00000479894 DDTLA6NHG4 134 aaPredicted RBP19.28■□□□□ 0.68
HDLBP-238ENST00000479894 COL9A1P20849 921 aa19.28■□□□□ 0.68
HDLBP-238ENST00000479894 ZNF280CQ8ND82 737 aa19.28■□□□□ 0.68
HDLBP-238ENST00000479894 API5Q9BZZ5 524 aaKnown RBP19.28■□□□□ 0.68
HDLBP-238ENST00000479894 SEMA6BQ9H3T3 888 aa19.28■□□□□ 0.68
HDLBP-238ENST00000479894 CDH23Q9H251 3354 aa19.27■□□□□ 0.68
HDLBP-238ENST00000479894 CACNB2Q08289 660 aaPredicted RBP19.27■□□□□ 0.68
HDLBP-238ENST00000479894 SPP2Q13103 211 aa19.27■□□□□ 0.68
HDLBP-238ENST00000479894 SH3D19Q5HYK7 790 aa19.27■□□□□ 0.68
HDLBP-238ENST00000479894 SLC4A10Q6U841 1118 aa19.27■□□□□ 0.68
HDLBP-238ENST00000479894 ANKRD44Q8N8A2 993 aa19.27■□□□□ 0.68
HDLBP-238ENST00000479894 GNL3LQ9NVN8 582 aaKnown RBP19.27■□□□□ 0.68
HDLBP-238ENST00000479894 RLFQ13129 1914 aa19.27■□□□□ 0.67
HDLBP-238ENST00000479894 NCOR1O75376 2440 aa19.26■□□□□ 0.67
HDLBP-238ENST00000479894 SEMA3EO15041 775 aa19.26■□□□□ 0.67
HDLBP-238ENST00000479894 ZKSCAN1P17029 563 aaPredicted RBP19.26■□□□□ 0.67
HDLBP-238ENST00000479894 CCDC84Q86UT8 332 aaPredicted RBP19.26■□□□□ 0.67
HDLBP-238ENST00000479894 ZGPATQ8N5A5 531 aaKnown RBP19.26■□□□□ 0.67
HDLBP-238ENST00000479894 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.26■□□□□ 0.67
HDLBP-238ENST00000479894 NPM3O75607 178 aaKnown RBP19.25■□□□□ 0.67
HDLBP-238ENST00000479894 HMGCS2P54868 508 aa19.25■□□□□ 0.67
HDLBP-238ENST00000479894 SLF2Q8IX21 1173 aa19.25■□□□□ 0.67
HDLBP-238ENST00000479894 FAM163AQ96GL9 167 aaPredicted RBP19.25■□□□□ 0.67
HDLBP-238ENST00000479894 PRKAG2Q9UGJ0 569 aa19.25■□□□□ 0.67
HDLBP-238ENST00000479894 DENND2AQ9ULE3 1009 aa19.25■□□□□ 0.67
HDLBP-238ENST00000479894 CENPBP07199 599 aaPredicted RBP19.24■□□□□ 0.67
HDLBP-238ENST00000479894 MAPK4P31152 587 aa19.24■□□□□ 0.67
HDLBP-238ENST00000479894 SMAD3P84022 425 aaKnown RBP19.24■□□□□ 0.67
HDLBP-238ENST00000479894 PDE3AQ14432 1141 aa19.24■□□□□ 0.67
HDLBP-238ENST00000479894 KLHDC4Q8TBB5 520 aa19.24■□□□□ 0.67
HDLBP-238ENST00000479894 USP6NLQ92738 828 aa19.24■□□□□ 0.67
HDLBP-238ENST00000479894 DDX4Q9NQI0 724 aaKnown RBP19.24■□□□□ 0.67
HDLBP-238ENST00000479894 EYA2O00167 538 aa19.23■□□□□ 0.67
HDLBP-238ENST00000479894 SLURP2P0DP57 97 aa19.23■□□□□ 0.67
HDLBP-238ENST00000479894 CCND3P30281 292 aaPredicted RBP19.23■□□□□ 0.67
HDLBP-238ENST00000479894 HOXA7P31268 230 aaPredicted RBP19.23■□□□□ 0.67
HDLBP-238ENST00000479894 RGS2P41220 211 aa19.23■□□□□ 0.67
HDLBP-238ENST00000479894 ZKSCAN2Q63HK3 967 aa19.23■□□□□ 0.67
HDLBP-238ENST00000479894 GPRC5AQ8NFJ5 357 aa19.23■□□□□ 0.67
HDLBP-238ENST00000479894 MYLIPQ8WY64 445 aa19.23■□□□□ 0.67
HDLBP-238ENST00000479894 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.23■□□□□ 0.672e-6■■■■■ 28.1
HDLBP-238ENST00000479894 TMEM265A0A087WTH1 108 aa19.22■□□□□ 0.67
HDLBP-238ENST00000479894 USP17L5A8MUK1 530 aa19.22■□□□□ 0.67
HDLBP-238ENST00000479894 IRX3P78415 501 aaPredicted RBP19.22■□□□□ 0.67
HDLBP-238ENST00000479894 SENP6Q9GZR1 1112 aaPredicted RBP19.22■□□□□ 0.67
HDLBP-238ENST00000479894 AS3MTQ9HBK9 375 aa19.22■□□□□ 0.67
HDLBP-238ENST00000479894 NOB1Q9ULX3 412 aaKnown RBP19.22■□□□□ 0.67
HDLBP-238ENST00000479894 TNFRSF10AO00220 468 aa19.21■□□□□ 0.67
HDLBP-238ENST00000479894 MSCO60682 206 aa19.21■□□□□ 0.67
HDLBP-238ENST00000479894 FOSL2P15408 326 aa19.21■□□□□ 0.67
HDLBP-238ENST00000479894 CAP2P40123 477 aa19.21■□□□□ 0.67
HDLBP-238ENST00000479894 PICALMQ13492 652 aa19.21■□□□□ 0.67
HDLBP-238ENST00000479894 TJAP1Q5JTD0 557 aa19.21■□□□□ 0.67
HDLBP-238ENST00000479894 GTF3C2Q8WUA4 911 aaPredicted RBP19.21■□□□□ 0.67
HDLBP-238ENST00000479894 FRAT1Q92837 279 aaPredicted RBP19.21■□□□□ 0.67
HDLBP-238ENST00000479894 APBA2Q99767 749 aa19.21■□□□□ 0.67
HDLBP-238ENST00000479894 TTYH1Q9H313 450 aaPredicted RBP19.21■□□□□ 0.67
HDLBP-238ENST00000479894 BCAR3O75815 825 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms