RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 MAGEA10P43363 369 aaPredicted RBP19.98■□□□□ 0.79
DDX56-210ENST00000479440 ZNF280CQ8ND82 737 aa19.98■□□□□ 0.79
DDX56-210ENST00000479440 ANP32CO43423 234 aa19.97■□□□□ 0.79
DDX56-210ENST00000479440 SLURP2P0DP57 97 aa19.97■□□□□ 0.79
DDX56-210ENST00000479440 SYN1P17600 705 aa19.97■□□□□ 0.79
DDX56-210ENST00000479440 RASGRF1Q13972 1273 aa19.97■□□□□ 0.79
DDX56-210ENST00000479440 OGDHLQ9ULD0 1010 aa19.97■□□□□ 0.79
DDX56-210ENST00000479440 NPM3O75607 178 aaKnown RBP19.96■□□□□ 0.79
DDX56-210ENST00000479440 HMGCS2P54868 508 aa19.96■□□□□ 0.79
DDX56-210ENST00000479440 SPP2Q13103 211 aa19.96■□□□□ 0.79
DDX56-210ENST00000479440 Q7L0L9 218 aa19.96■□□□□ 0.79
DDX56-210ENST00000479440 SOCS4Q8WXH5 440 aa19.96■□□□□ 0.79
DDX56-210ENST00000479440 UBE2OQ9C0C9 1292 aaKnown RBP19.96■□□□□ 0.79
DDX56-210ENST00000479440 ASCC2Q9H1I8 757 aaPredicted RBP19.96■□□□□ 0.79
DDX56-210ENST00000479440 AS3MTQ9HBK9 375 aa19.96■□□□□ 0.79
DDX56-210ENST00000479440 COL6A3P12111 3177 aa19.95■□□□□ 0.78
DDX56-210ENST00000479440 MAP4K4O95819 1239 aaPredicted RBP19.95■□□□□ 0.78
DDX56-210ENST00000479440 ADORA1P30542 326 aa19.95■□□□□ 0.78
DDX56-210ENST00000479440 ERICH6Q7L0X2 663 aa19.95■□□□□ 0.78
DDX56-210ENST00000479440 SSH1Q8WYL5 1049 aa19.95■□□□□ 0.78
DDX56-210ENST00000479440 TRIB2Q92519 343 aa19.95■□□□□ 0.78
DDX56-210ENST00000479440 GJD2Q9UKL4 321 aa19.95■□□□□ 0.78
DDX56-210ENST00000479440 HDAC5Q9UQL6 1122 aa19.95■□□□□ 0.78
DDX56-210ENST00000479440 ZNF521Q96K83 1311 aa19.95■□□□□ 0.78
DDX56-210ENST00000479440 GPR75-ASB3A0A0A6YYF3 556 aa19.94■□□□□ 0.78
DDX56-210ENST00000479440 FAM196BA6NMK8 535 aa19.94■□□□□ 0.78
DDX56-210ENST00000479440 USP17L5A8MUK1 530 aa19.94■□□□□ 0.78
DDX56-210ENST00000479440 RHBDL3P58872 404 aa19.94■□□□□ 0.78
DDX56-210ENST00000479440 IRX3P78415 501 aaPredicted RBP19.94■□□□□ 0.78
DDX56-210ENST00000479440 TRIM32Q13049 653 aa19.94■□□□□ 0.78
DDX56-210ENST00000479440 SH3D19Q5HYK7 790 aa19.94■□□□□ 0.78
DDX56-210ENST00000479440 MTMR10Q9NXD2 777 aa19.94■□□□□ 0.78
DDX56-210ENST00000479440 MORF4L1Q9UBU8 362 aa19.94■□□□□ 0.78
DDX56-210ENST00000479440 ATAD5Q96QE3 1844 aa19.94■□□□□ 0.78
DDX56-210ENST00000479440 PRKAR2AP13861 404 aaKnown RBP19.93■□□□□ 0.78
DDX56-210ENST00000479440 CAP2P40123 477 aa19.93■□□□□ 0.78
DDX56-210ENST00000479440 GSTO1P78417 241 aa19.93■□□□□ 0.78
DDX56-210ENST00000479440 MECOMQ03112 1051 aa19.93■□□□□ 0.78
DDX56-210ENST00000479440 MVPQ14764 893 aaKnown RBP19.93■□□□□ 0.78
DDX56-210ENST00000479440 TRMT44Q8IYL2 757 aaKnown RBP19.93■□□□□ 0.78
DDX56-210ENST00000479440 PFASO15067 1338 aa19.93■□□□□ 0.78
DDX56-210ENST00000479440 CYP2B6P20813 491 aa19.92■□□□□ 0.78
DDX56-210ENST00000479440 PDE3AQ14432 1141 aa19.92■□□□□ 0.78
DDX56-210ENST00000479440 MAP3K21Q5TCX8 1036 aa19.92■□□□□ 0.78
DDX56-210ENST00000479440 FAM9BQ8IZU0 186 aa19.92■□□□□ 0.78
DDX56-210ENST00000479440 NUDT12Q9BQG2 462 aa19.92■□□□□ 0.78
DDX56-210ENST00000479440 HERC5Q9UII4 1024 aaKnown RBP19.92■□□□□ 0.78
DDX56-210ENST00000479440 PLXNB2O15031 1838 aa19.91■□□□□ 0.78
DDX56-210ENST00000479440 E9PSI1 815 aa19.91■□□□□ 0.78
DDX56-210ENST00000479440 LDHCP07864 332 aa19.91■□□□□ 0.78
DDX56-210ENST00000479440 XRCC5P13010 732 aaKnown RBP19.91■□□□□ 0.78
DDX56-210ENST00000479440 ZKSCAN1P17029 563 aaPredicted RBP19.91■□□□□ 0.78
DDX56-210ENST00000479440 ALDH1L2Q3SY69 923 aa19.91■□□□□ 0.78
DDX56-210ENST00000479440 COPRSQ9NQ92 184 aa19.91■□□□□ 0.78
DDX56-210ENST00000479440 TMOD4Q9NZQ9 345 aa19.91■□□□□ 0.78
DDX56-210ENST00000479440 PA2G4Q9UQ80 394 aaKnown RBP19.91■□□□□ 0.78
DDX56-210ENST00000479440 AKAP2Q9Y2D5 859 aa19.91■□□□□ 0.78
DDX56-210ENST00000479440 MTMR2Q13614 643 aa19.9■□□□□ 0.78
DDX56-210ENST00000479440 SMC4Q9NTJ3 1288 aa19.9■□□□□ 0.78
DDX56-210ENST00000479440 DOCK3Q8IZD9 2030 aa19.9■□□□□ 0.78
DDX56-210ENST00000479440 A0A1B0GUL7 405 aa19.89■□□□□ 0.77
DDX56-210ENST00000479440 MAPK4P31152 587 aa19.89■□□□□ 0.77
DDX56-210ENST00000479440 GPRC5AQ8NFJ5 357 aa19.89■□□□□ 0.77
DDX56-210ENST00000479440 GTF3C2Q8WUA4 911 aaPredicted RBP19.89■□□□□ 0.77
DDX56-210ENST00000479440 XAGE2Q96GT9 111 aa19.89■□□□□ 0.77
DDX56-210ENST00000479440 COL6A1P12109 1028 aa19.88■□□□□ 0.77
DDX56-210ENST00000479440 TIMM10P62072 90 aa19.88■□□□□ 0.77
DDX56-210ENST00000479440 CCAR1Q8IX12 1150 aaKnown RBP19.88■□□□□ 0.77
DDX56-210ENST00000479440 TEX11Q8IYF3 940 aa19.88■□□□□ 0.77
DDX56-210ENST00000479440 NOL10Q9BSC4 688 aaKnown RBP19.88■□□□□ 0.77
DDX56-210ENST00000479440 WDR18Q9BV38 432 aa19.88■□□□□ 0.77
DDX56-210ENST00000479440 ASNSP08243 561 aa19.87■□□□□ 0.77
DDX56-210ENST00000479440 HOXA7P31268 230 aaPredicted RBP19.87■□□□□ 0.77
DDX56-210ENST00000479440 RGS2P41220 211 aa19.87■□□□□ 0.77
DDX56-210ENST00000479440 BACE1P56817 501 aa19.87■□□□□ 0.77
DDX56-210ENST00000479440 HERVK_113P62684 666 aa19.87■□□□□ 0.77
DDX56-210ENST00000479440 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.87■□□□□ 0.77
DDX56-210ENST00000479440 ZNF384Q8TF68 577 aa19.87■□□□□ 0.77
DDX56-210ENST00000479440 NSUN4Q96CB9 384 aaKnown RBP19.87■□□□□ 0.77
DDX56-210ENST00000479440 APBA2Q99767 749 aa19.87■□□□□ 0.77
DDX56-210ENST00000479440 DHX36Q9H2U1 1008 aaKnown RBP19.86■□□□□ 0.77
DDX56-210ENST00000479440 CWC22Q9HCG8 908 aaKnown RBP19.86■□□□□ 0.77
DDX56-210ENST00000479440 RAI14Q9P0K7 980 aa19.86■□□□□ 0.77
DDX56-210ENST00000479440 PI4KBQ9UBF8 816 aa19.86■□□□□ 0.77
DDX56-210ENST00000479440 MAST2Q6P0Q8 1798 aa19.85■□□□□ 0.77
DDX56-210ENST00000479440 C19orf81C9J6K1 198 aa19.85■□□□□ 0.77
DDX56-210ENST00000479440 MDM2Q00987 491 aaPredicted RBP19.85■□□□□ 0.77
DDX56-210ENST00000479440 CACNB2Q08289 660 aaPredicted RBP19.85■□□□□ 0.77
DDX56-210ENST00000479440 RRP1BQ14684 758 aaKnown RBP19.85■□□□□ 0.77
DDX56-210ENST00000479440 LRRC26Q2I0M4 334 aa19.85■□□□□ 0.77
DDX56-210ENST00000479440 SPATA5Q8NB90 893 aa19.85■□□□□ 0.77
DDX56-210ENST00000479440 COL25A1Q9BXS0 654 aaPredicted RBP19.85■□□□□ 0.77
DDX56-210ENST00000479440 TRIM34Q9BYJ4 488 aa19.85■□□□□ 0.77
DDX56-210ENST00000479440 TXNRD2Q9NNW7 524 aa19.85■□□□□ 0.77
DDX56-210ENST00000479440 GINM1Q9NU53 330 aa19.85■□□□□ 0.77
DDX56-210ENST00000479440 HMG20BQ9P0W2 317 aa19.85■□□□□ 0.77
DDX56-210ENST00000479440 ERVK-9P63128 1117 aa19.84■□□□□ 0.77
DDX56-210ENST00000479440 ERVK-24P63145 666 aa19.84■□□□□ 0.77
DDX56-210ENST00000479440 TFCP2Q12800 502 aa19.84■□□□□ 0.77
DDX56-210ENST00000479440 GORABQ5T7V8 394 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms