RNA–Protein interactions for RNA: ENST00000477112.1

DDX17-208, Transcript of DEAD-box helicase 17, human

TSL 2

Gene DDX17, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX17-208	ENST00000477112	GSX1	Q9H4S2	264 aa	Predicted RBP	4.12	□□□□□ -1.75
DDX17-208	ENST00000477112	TMEM63C	Q9P1W3	806 aa		4.12	□□□□□ -1.75
DDX17-208	ENST00000477112	CNTN3	Q9P232	1028 aa		4.12	□□□□□ -1.75
DDX17-208	ENST00000477112		U3KQE9	123 aa		4.12	□□□□□ -1.75
DDX17-208	ENST00000477112	CARNS1	A5YM72	827 aa		4.11	□□□□□ -1.75
DDX17-208	ENST00000477112	ABL1	P00519	1130 aa		4.11	□□□□□ -1.75
DDX17-208	ENST00000477112	GDNF	P39905	211 aa		4.11	□□□□□ -1.75
DDX17-208	ENST00000477112	PMEPA1	Q969W9	287 aa		4.11	□□□□□ -1.75
DDX17-208	ENST00000477112	CXXC1	Q9P0U4	656 aa	Predicted RBP	4.11	□□□□□ -1.75
DDX17-208	ENST00000477112	CFTR	P13569	1480 aa		4.11	□□□□□ -1.75
DDX17-208	ENST00000477112	PRDM2	Q13029	1718 aa		4.1	□□□□□ -1.75
DDX17-208	ENST00000477112	PRMT3	O60678	531 aa		4.1	□□□□□ -1.75
DDX17-208	ENST00000477112	CLSTN1	O94985	981 aa		4.1	□□□□□ -1.75
DDX17-208	ENST00000477112	IRX6	P78412	446 aa	Predicted RBP	4.1	□□□□□ -1.75
DDX17-208	ENST00000477112	FKBP4	Q02790	459 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
DDX17-208	ENST00000477112	C16orf46	Q6P387	395 aa		4.1	□□□□□ -1.75
DDX17-208	ENST00000477112	TMED8	Q6PL24	325 aa	Predicted RBP	4.1	□□□□□ -1.75
DDX17-208	ENST00000477112	CERS3	Q8IU89	383 aa		4.1	□□□□□ -1.75
DDX17-208	ENST00000477112	FAM177A1	Q8N128	213 aa	Predicted RBP	4.1	□□□□□ -1.75
DDX17-208	ENST00000477112	CCDC120	Q96HB5	630 aa		4.1	□□□□□ -1.75
DDX17-208	ENST00000477112	CORO1B	Q9BR76	489 aa		4.1	□□□□□ -1.75
DDX17-208	ENST00000477112	TNKS2	Q9H2K2	1166 aa		4.1	□□□□□ -1.75
DDX17-208	ENST00000477112	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	4.1	□□□□□ -1.75
DDX17-208	ENST00000477112	AQR	O60306	1485 aa	Known RBP eCLIP	4.1	□□□□□ -1.75	6e-8	■■■■■ 31
DDX17-208	ENST00000477112	TOP2A	P11388	1531 aa	Known RBP	4.1	□□□□□ -1.75
DDX17-208	ENST00000477112	RBM47	A0AV96	593 aa	Known RBP	4.09	□□□□□ -1.75
DDX17-208	ENST00000477112	LEFTY1	O75610	366 aa		4.09	□□□□□ -1.75
DDX17-208	ENST00000477112	FAM13A	O94988	1023 aa		4.09	□□□□□ -1.75
DDX17-208	ENST00000477112	RAC2	P15153	192 aa		4.09	□□□□□ -1.75
DDX17-208	ENST00000477112	FAM69C	Q0P6D2	419 aa		4.09	□□□□□ -1.75
DDX17-208	ENST00000477112	SPATS1	Q496A3	300 aa		4.09	□□□□□ -1.75
DDX17-208	ENST00000477112	CYB5RL	Q6IPT4	315 aa		4.09	□□□□□ -1.75
DDX17-208	ENST00000477112	ALKBH2	Q6NS38	261 aa		4.09	□□□□□ -1.75
DDX17-208	ENST00000477112	TMEM151B	Q8IW70	566 aa		4.09	□□□□□ -1.75
DDX17-208	ENST00000477112	C1orf127	Q8N9H9	656 aa		4.09	□□□□□ -1.75
DDX17-208	ENST00000477112	DDX54	Q8TDD1	881 aa	Known RBP	4.09	□□□□□ -1.75
DDX17-208	ENST00000477112	BCL2L13	Q9BXK5	485 aa		4.09	□□□□□ -1.75
DDX17-208	ENST00000477112	CNOT6	Q9ULM6	557 aa	Known RBP	4.09	□□□□□ -1.75
DDX17-208	ENST00000477112	RSF1	Q96T23	1441 aa	Predicted RBP	4.09	□□□□□ -1.75
DDX17-208	ENST00000477112	RAD54L2	Q9Y4B4	1467 aa		4.09	□□□□□ -1.75
DDX17-208	ENST00000477112	TOPBP1	Q92547	1522 aa		4.09	□□□□□ -1.75
DDX17-208	ENST00000477112	ERCC6L2	Q5T890	1561 aa		4.09	□□□□□ -1.75
DDX17-208	ENST00000477112	AKAP8	O43823	692 aa	Known RBP	4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	ICMT	O60725	284 aa		4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	AOC2	O75106	756 aa		4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	RPLP1	P05386	114 aa	Known RBP	4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	SRF	P11831	508 aa		4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	TARBP1	Q13395	1621 aa	Known RBP	4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	PDE3A	Q14432	1141 aa		4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	ZNF385B	Q569K4	471 aa		4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	PHLDB3	Q6NSJ2	640 aa		4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	SMYD4	Q8IYR2	804 aa	Predicted RBP	4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	TTC16	Q8NEE8	873 aa		4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	ABHD4	Q8TB40	342 aa		4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	BAHD1	Q8TBE0	780 aa	Predicted RBP	4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	PRIMPOL	Q96LW4	560 aa		4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	GPR20	Q99678	358 aa		4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	ZKSCAN3	Q9BRR0	538 aa		4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	DUSP23	Q9BVJ7	150 aa		4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	NRSN2	Q9GZP1	204 aa		4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	SAP130	Q9H0E3	1048 aa		4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	CARS2	Q9HA77	564 aa	Known RBP	4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	CWC22	Q9HCG8	908 aa	Known RBP	4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	DCTN4	Q9UJW0	460 aa		4.08	□□□□□ -1.76
DDX17-208	ENST00000477112	MYRF	Q9Y2G1	1151 aa		4.08	□□□□□ -1.76
DDX17-208	ENST00000477112		H3BRB1	525 aa		4.07	□□□□□ -1.76
DDX17-208	ENST00000477112	RFXAP	O00287	272 aa		4.07	□□□□□ -1.76
DDX17-208	ENST00000477112	NDUFB5	O43674	189 aa		4.07	□□□□□ -1.76
DDX17-208	ENST00000477112	TRIM13	O60858	407 aa		4.07	□□□□□ -1.76
DDX17-208	ENST00000477112	RNGTT	O60942	597 aa	Known RBP	4.07	□□□□□ -1.76
DDX17-208	ENST00000477112	CTSB	P07858	339 aa		4.07	□□□□□ -1.76
DDX17-208	ENST00000477112	MAPK1	P28482	360 aa		4.07	□□□□□ -1.76
DDX17-208	ENST00000477112	ZEB1	P37275	1124 aa	Predicted RBP	4.07	□□□□□ -1.76
DDX17-208	ENST00000477112	SERPINB4	P48594	390 aa		4.07	□□□□□ -1.76
DDX17-208	ENST00000477112	AAMP	Q13685	434 aa		4.07	□□□□□ -1.76
DDX17-208	ENST00000477112	GTF3C2	Q8WUA4	911 aa	Predicted RBP	4.07	□□□□□ -1.76
DDX17-208	ENST00000477112	CITED4	Q96RK1	184 aa		4.07	□□□□□ -1.76
DDX17-208	ENST00000477112	PSMD1	Q99460	953 aa		4.07	□□□□□ -1.76
DDX17-208	ENST00000477112	ATXN3L	Q9H3M9	355 aa		4.07	□□□□□ -1.76
DDX17-208	ENST00000477112	TUT1	Q9H6E5	874 aa	Known RBP	4.07	□□□□□ -1.76
DDX17-208	ENST00000477112	SRRD	Q9UH36	339 aa		4.07	□□□□□ -1.76
DDX17-208	ENST00000477112	GTF2IRD1	Q9UHL9	959 aa		4.07	□□□□□ -1.76
DDX17-208	ENST00000477112	CCDC88B	A6NC98	1476 aa		4.06	□□□□□ -1.76
DDX17-208	ENST00000477112	EDN3	P14138	238 aa		4.06	□□□□□ -1.76
DDX17-208	ENST00000477112	PCSK2	P16519	638 aa		4.06	□□□□□ -1.76
DDX17-208	ENST00000477112	PDE3B	Q13370	1112 aa		4.06	□□□□□ -1.76
DDX17-208	ENST00000477112	FKBP5	Q13451	457 aa	Predicted RBP	4.06	□□□□□ -1.76
DDX17-208	ENST00000477112	OCLN	Q16625	522 aa		4.06	□□□□□ -1.76
DDX17-208	ENST00000477112	FAM26D	Q5JW98	314 aa		4.06	□□□□□ -1.76
DDX17-208	ENST00000477112	TOP6BL	Q8N6T0	577 aa		4.06	□□□□□ -1.76
DDX17-208	ENST00000477112	ABTB2	Q8N961	1025 aa		4.06	□□□□□ -1.76
DDX17-208	ENST00000477112	NAP1L5	Q96NT1	182 aa	Predicted RBP	4.06	□□□□□ -1.76
DDX17-208	ENST00000477112	XYLT2	Q9H1B5	865 aa		4.06	□□□□□ -1.76
DDX17-208	ENST00000477112	USP35	Q9P2H5	1018 aa		4.06	□□□□□ -1.76
DDX17-208	ENST00000477112	PPP1R9A	Q9ULJ8	1098 aa		4.06	□□□□□ -1.76
DDX17-208	ENST00000477112	CLASP1	Q7Z460	1538 aa		4.05	□□□□□ -1.76
DDX17-208	ENST00000477112	IFT140	Q96RY7	1462 aa		4.05	□□□□□ -1.76
DDX17-208	ENST00000477112		A0A0U1RQG5	324 aa	Predicted RBP	4.05	□□□□□ -1.76
DDX17-208	ENST00000477112	ANKRD33B	A6NCL7	494 aa		4.05	□□□□□ -1.76
DDX17-208	ENST00000477112	OTOL1	A6NHN0	477 aa	Predicted RBP	4.05	□□□□□ -1.76

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