RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 TIMM10P62072 90 aa21.6■■□□□ 1.05
CUL4A-208ENST00000474116 TRIM32Q13049 653 aa21.6■■□□□ 1.05
CUL4A-208ENST00000474116 SPP2Q13103 211 aa21.6■■□□□ 1.05
CUL4A-208ENST00000474116 SPTY2D1Q68D10 685 aaPredicted RBP21.6■■□□□ 1.05
CUL4A-208ENST00000474116 C7orf61Q8IZ16 206 aa21.6■■□□□ 1.05
CUL4A-208ENST00000474116 OSBPL5Q9H0X9 879 aaPredicted RBP21.6■■□□□ 1.05
CUL4A-208ENST00000474116 COPRSQ9NQ92 184 aa21.6■■□□□ 1.05
CUL4A-208ENST00000474116 RPTORQ8N122 1335 aa21.59■■□□□ 1.05
CUL4A-208ENST00000474116 MECOMQ03112 1051 aa21.59■■□□□ 1.05
CUL4A-208ENST00000474116 ALDH1L2Q3SY69 923 aa21.59■■□□□ 1.05
CUL4A-208ENST00000474116 ZNF280CQ8ND82 737 aa21.59■■□□□ 1.05
CUL4A-208ENST00000474116 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.59■■□□□ 1.05
CUL4A-208ENST00000474116 ZMYND8Q9ULU4 1186 aaPredicted RBP21.59■■□□□ 1.05
CUL4A-208ENST00000474116 PLXNB2O15031 1838 aa21.58■■□□□ 1.05
CUL4A-208ENST00000474116 RRP1BQ14684 758 aaKnown RBP21.58■■□□□ 1.05
CUL4A-208ENST00000474116 NBPF3Q9H094 633 aa21.58■■□□□ 1.05
CUL4A-208ENST00000474116 HMX1Q9NP08 348 aaPredicted RBP21.58■■□□□ 1.05
CUL4A-208ENST00000474116 E9PSI1 815 aa21.57■■□□□ 1.04
CUL4A-208ENST00000474116 SH3D19Q5HYK7 790 aa21.57■■□□□ 1.04
CUL4A-208ENST00000474116 TBC1D2Q9BYX2 928 aa21.57■■□□□ 1.04
CUL4A-208ENST00000474116 ASCC2Q9H1I8 757 aaPredicted RBP21.57■■□□□ 1.04
CUL4A-208ENST00000474116 OGDHLQ9ULD0 1010 aa21.57■■□□□ 1.04
CUL4A-208ENST00000474116 DDX60LQ5H9U9 1706 aaKnown RBP21.56■■□□□ 1.04
CUL4A-208ENST00000474116 CAP2P40123 477 aa21.56■■□□□ 1.04
CUL4A-208ENST00000474116 HMGCS2P54868 508 aa21.56■■□□□ 1.04
CUL4A-208ENST00000474116 PABPC4Q13310 644 aaKnown RBP eCLIP21.56■■□□□ 1.04
CUL4A-208ENST00000474116 LRIT3Q3SXY7 679 aa21.56■■□□□ 1.04
CUL4A-208ENST00000474116 ERICH6Q7L0X2 663 aa21.56■■□□□ 1.04
CUL4A-208ENST00000474116 XAGE2Q96GT9 111 aa21.56■■□□□ 1.04
CUL4A-208ENST00000474116 MORF4L1Q9UBU8 362 aa21.56■■□□□ 1.04
CUL4A-208ENST00000474116 ATAD5Q96QE3 1844 aa21.56■■□□□ 1.04
CUL4A-208ENST00000474116 COL2A1P02458 1487 aaPredicted RBP21.56■■□□□ 1.04
CUL4A-208ENST00000474116 A0A1B0GUL7 405 aa21.55■■□□□ 1.04
CUL4A-208ENST00000474116 MAP4K4O95819 1239 aaPredicted RBP21.55■■□□□ 1.04
CUL4A-208ENST00000474116 SLFN5Q08AF3 891 aa21.55■■□□□ 1.04
CUL4A-208ENST00000474116 MAP3K21Q5TCX8 1036 aa21.55■■□□□ 1.04
CUL4A-208ENST00000474116 DEFB123Q8N688 67 aa21.55■■□□□ 1.04
CUL4A-208ENST00000474116 TRIB2Q92519 343 aa21.55■■□□□ 1.04
CUL4A-208ENST00000474116 C11orf49Q9H6J7 331 aa21.55■■□□□ 1.04
CUL4A-208ENST00000474116 USP17L5A8MUK1 530 aa21.54■■□□□ 1.04
CUL4A-208ENST00000474116 SYN1P17600 705 aa21.54■■□□□ 1.04
CUL4A-208ENST00000474116 MAGEA10P43363 369 aaPredicted RBP21.54■■□□□ 1.04
CUL4A-208ENST00000474116 Q7L0L9 218 aa21.54■■□□□ 1.04
CUL4A-208ENST00000474116 NSUN4Q96CB9 384 aaKnown RBP21.54■■□□□ 1.04
CUL4A-208ENST00000474116 SMC4Q9NTJ3 1288 aa21.54■■□□□ 1.04
CUL4A-208ENST00000474116 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.54■■□□□ 1.04
CUL4A-208ENST00000474116 HMG20BQ9P0W2 317 aa21.53■■□□□ 1.04
CUL4A-208ENST00000474116 HDAC5Q9UQL6 1122 aa21.53■■□□□ 1.04
CUL4A-208ENST00000474116 LDHCP07864 332 aa21.52■■□□□ 1.04
CUL4A-208ENST00000474116 TFCP2Q12800 502 aa21.52■■□□□ 1.04
CUL4A-208ENST00000474116 MVPQ14764 893 aaKnown RBP21.52■■□□□ 1.04
CUL4A-208ENST00000474116 TDHQ8IZJ6 230 aa21.52■■□□□ 1.04
CUL4A-208ENST00000474116 WDR18Q9BV38 432 aa21.52■■□□□ 1.04
CUL4A-208ENST00000474116 MTMR10Q9NXD2 777 aa21.52■■□□□ 1.04
CUL4A-208ENST00000474116 AKAP2Q9Y2D5 859 aa21.52■■□□□ 1.04
CUL4A-208ENST00000474116 STXBP5LQ9Y2K9 1186 aa21.52■■□□□ 1.04
CUL4A-208ENST00000474116 PFASO15067 1338 aa21.52■■□□□ 1.03
CUL4A-208ENST00000474116 CYP2B6P20813 491 aa21.51■■□□□ 1.03
CUL4A-208ENST00000474116 HOXA7P31268 230 aaPredicted RBP21.51■■□□□ 1.03
CUL4A-208ENST00000474116 GSTO1P78417 241 aa21.51■■□□□ 1.03
CUL4A-208ENST00000474116 PI16Q6UXB8 463 aa21.51■■□□□ 1.03
CUL4A-208ENST00000474116 TBC1D9Q6ZT07 1266 aa21.51■■□□□ 1.03
CUL4A-208ENST00000474116 MEIS3Q99687 375 aa21.51■■□□□ 1.03
CUL4A-208ENST00000474116 AS3MTQ9HBK9 375 aa21.51■■□□□ 1.03
CUL4A-208ENST00000474116 HERC5Q9UII4 1024 aaKnown RBP21.51■■□□□ 1.03
CUL4A-208ENST00000474116 NOB1Q9ULX3 412 aaKnown RBP21.51■■□□□ 1.03
CUL4A-208ENST00000474116 PEX10O60683 326 aa21.5■■□□□ 1.03
CUL4A-208ENST00000474116 COL6A1P12109 1028 aa21.5■■□□□ 1.03
CUL4A-208ENST00000474116 XRCC5P13010 732 aaKnown RBP21.5■■□□□ 1.03
CUL4A-208ENST00000474116 SPATA5Q8NB90 893 aa21.5■■□□□ 1.03
CUL4A-208ENST00000474116 P2RX7Q99572 595 aaKnown RBP21.5■■□□□ 1.03
CUL4A-208ENST00000474116 TXNRD2Q9NNW7 524 aa21.5■■□□□ 1.03
CUL4A-208ENST00000474116 PRKAR2AP13861 404 aaKnown RBP21.49■■□□□ 1.03
CUL4A-208ENST00000474116 BACE1P56817 501 aa21.49■■□□□ 1.03
CUL4A-208ENST00000474116 JAG1P78504 1218 aa21.49■■□□□ 1.03
CUL4A-208ENST00000474116 SIPA1L1O43166 1804 aa21.49■■□□□ 1.03
CUL4A-208ENST00000474116 MTMR2Q13614 643 aa21.48■■□□□ 1.03
CUL4A-208ENST00000474116 TEX11Q8IYF3 940 aa21.48■■□□□ 1.03
CUL4A-208ENST00000474116 TRMT2AQ8IZ69 625 aaKnown RBP21.48■■□□□ 1.03
CUL4A-208ENST00000474116 GPRC5AQ8NFJ5 357 aa21.48■■□□□ 1.03
CUL4A-208ENST00000474116 USP6NLQ92738 828 aa21.48■■□□□ 1.03
CUL4A-208ENST00000474116 CDCA7LQ96GN5 454 aa21.48■■□□□ 1.03
CUL4A-208ENST00000474116 NEUROD6Q96NK8 337 aa21.48■■□□□ 1.03
CUL4A-208ENST00000474116 NUDT12Q9BQG2 462 aa21.48■■□□□ 1.03
CUL4A-208ENST00000474116 UBE2OQ9C0C9 1292 aaKnown RBP21.48■■□□□ 1.03
CUL4A-208ENST00000474116 PI4KBQ9UBF8 816 aa21.48■■□□□ 1.03
CUL4A-208ENST00000474116 ARID4AP29374 1257 aaPredicted RBP21.47■■□□□ 1.03
CUL4A-208ENST00000474116 HERVK_113P62684 666 aa21.47■■□□□ 1.03
CUL4A-208ENST00000474116 IRX3P78415 501 aaPredicted RBP21.47■■□□□ 1.03
CUL4A-208ENST00000474116 CACNB2Q08289 660 aaPredicted RBP21.47■■□□□ 1.03
CUL4A-208ENST00000474116 MTX1Q13505 466 aa21.47■■□□□ 1.03
CUL4A-208ENST00000474116 LHX8Q68G74 356 aa21.47■■□□□ 1.03
CUL4A-208ENST00000474116 SH3RF3Q8TEJ3 882 aaPredicted RBP21.47■■□□□ 1.03
CUL4A-208ENST00000474116 SOCS4Q8WXH5 440 aa21.47■■□□□ 1.03
CUL4A-208ENST00000474116 API5Q9BZZ5 524 aaKnown RBP21.47■■□□□ 1.03
CUL4A-208ENST00000474116 RAI14Q9P0K7 980 aa21.47■■□□□ 1.03
CUL4A-208ENST00000474116 RBPJLQ9UBG7 517 aa21.47■■□□□ 1.03
CUL4A-208ENST00000474116 SRGAP3O43295 1099 aa21.46■■□□□ 1.03
CUL4A-208ENST00000474116 Q3C1V9 767 aa21.46■■□□□ 1.03
CUL4A-208ENST00000474116 POTEEQ6S8J3 1075 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms