RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 PCDHAC2Q9Y5I4 1007 aa12.71□□□□□ -0.37
SP140-208ENST00000473711 UTRNP46939 3433 aa12.71□□□□□ -0.38
SP140-208ENST00000473711 SCN9AQ15858 1988 aa12.7□□□□□ -0.38
SP140-208ENST00000473711 MYH2Q9UKX2 1941 aa12.7□□□□□ -0.38
SP140-208ENST00000473711 B4E1Z4 1266 aa12.7□□□□□ -0.38
SP140-208ENST00000473711 FGD1P98174 961 aa12.7□□□□□ -0.38
SP140-208ENST00000473711 TOB2Q14106 344 aaPredicted RBP12.7□□□□□ -0.38
SP140-208ENST00000473711 SLC4A8Q2Y0W8 1093 aa12.7□□□□□ -0.38
SP140-208ENST00000473711 SBK1Q52WX2 424 aa12.7□□□□□ -0.38
SP140-208ENST00000473711 RRP12Q5JTH9 1297 aaKnown RBP12.7□□□□□ -0.38
SP140-208ENST00000473711 CDC42EP5Q6NZY7 148 aa12.7□□□□□ -0.38
SP140-208ENST00000473711 MB21D2Q8IYB1 491 aaPredicted RBP12.7□□□□□ -0.38
SP140-208ENST00000473711 NKX2-3Q8TAU0 364 aa12.7□□□□□ -0.38
SP140-208ENST00000473711 STAG1Q8WVM7 1258 aa12.7□□□□□ -0.38
SP140-208ENST00000473711 ZDHHC15Q96MV8 337 aa12.7□□□□□ -0.38
SP140-208ENST00000473711 ANP32EQ9BTT0 268 aa12.7□□□□□ -0.38
SP140-208ENST00000473711 TOMM22Q9NS69 142 aa12.7□□□□□ -0.38
SP140-208ENST00000473711 MKRN1Q9UHC7 482 aaKnown RBP12.7□□□□□ -0.38
SP140-208ENST00000473711 SAP30BPQ9UHR5 308 aaKnown RBP12.7□□□□□ -0.38
SP140-208ENST00000473711 ANAPC4Q9UJX5 808 aa12.7□□□□□ -0.38
SP140-208ENST00000473711 NEDD4P46934 1319 aa12.69□□□□□ -0.38
SP140-208ENST00000473711 MYO3BQ8WXR4 1341 aa12.69□□□□□ -0.38
SP140-208ENST00000473711 RIOK3O14730 519 aaKnown RBP12.69□□□□□ -0.38
SP140-208ENST00000473711 PRC1O43663 620 aa12.69□□□□□ -0.38
SP140-208ENST00000473711 POLR3DP05423 398 aaPredicted RBP12.69□□□□□ -0.38
SP140-208ENST00000473711 MCM5P33992 734 aa12.69□□□□□ -0.38
SP140-208ENST00000473711 TNIP1Q15025 636 aa12.69□□□□□ -0.38
SP140-208ENST00000473711 ANKRD1Q15327 319 aa12.69□□□□□ -0.38
SP140-208ENST00000473711 CFAP100Q494V2 611 aa12.69□□□□□ -0.38
SP140-208ENST00000473711 CYB5R4Q7L1T6 521 aa12.69□□□□□ -0.38
SP140-208ENST00000473711 GMLQ99445 158 aa12.69□□□□□ -0.38
SP140-208ENST00000473711 KRT23Q9C075 422 aa12.69□□□□□ -0.38
SP140-208ENST00000473711 SLKQ9H2G2 1235 aaPredicted RBP12.69□□□□□ -0.38
SP140-208ENST00000473711 RNF41Q9H4P4 317 aaPredicted RBP12.69□□□□□ -0.38
SP140-208ENST00000473711 ARPP21Q9UBL0 812 aaPredicted RBP12.69□□□□□ -0.38
SP140-208ENST00000473711 SERPINA10Q9UK55 444 aa12.69□□□□□ -0.38
SP140-208ENST00000473711 FER1L6Q2WGJ9 1857 aa12.69□□□□□ -0.38
SP140-208ENST00000473711 EIF6P56537 245 aaKnown RBP12.68□□□□□ -0.38
SP140-208ENST00000473711 ANTXR2P58335 489 aa12.68□□□□□ -0.38
SP140-208ENST00000473711 PICALMQ13492 652 aa12.68□□□□□ -0.38
SP140-208ENST00000473711 C12orf60Q5U649 245 aa12.68□□□□□ -0.38
SP140-208ENST00000473711 AMOTL1Q8IY63 956 aa12.68□□□□□ -0.38
SP140-208ENST00000473711 AGBL3Q8NEM8 1001 aa12.68□□□□□ -0.38
SP140-208ENST00000473711 ZSCAN31Q96LW9 406 aaPredicted RBP12.68□□□□□ -0.38
SP140-208ENST00000473711 CNNM2Q9H8M5 875 aa12.68□□□□□ -0.38
SP140-208ENST00000473711 HDAC9Q9UKV0 1011 aa12.68□□□□□ -0.38
SP140-208ENST00000473711 TPCN1Q9ULQ1 816 aa12.68□□□□□ -0.38
SP140-208ENST00000473711 FLT1P17948 1338 aa12.67□□□□□ -0.38
SP140-208ENST00000473711 KDM4AO75164 1064 aa12.67□□□□□ -0.38
SP140-208ENST00000473711 WDHD1O75717 1129 aaPredicted RBP12.67□□□□□ -0.38
SP140-208ENST00000473711 LARGE1O95461 756 aa12.67□□□□□ -0.38
SP140-208ENST00000473711 SLC3A2P08195 630 aaKnown RBP12.67□□□□□ -0.38
SP140-208ENST00000473711 YBX3P16989 372 aaKnown RBP eCLIP12.67□□□□□ -0.38
SP140-208ENST00000473711 CUL4AQ13619 759 aa12.67□□□□□ -0.38
SP140-208ENST00000473711 ME3Q16798 604 aa12.67□□□□□ -0.38
SP140-208ENST00000473711 OGFOD1Q8N543 542 aa12.67□□□□□ -0.38
SP140-208ENST00000473711 BRF1Q92994 677 aa12.67□□□□□ -0.38
SP140-208ENST00000473711 DYNLL2Q96FJ2 89 aa12.67□□□□□ -0.38
SP140-208ENST00000473711 L3MBTL3Q96JM7 780 aaPredicted RBP12.67□□□□□ -0.38
SP140-208ENST00000473711 PRMT6Q96LA8 375 aaPredicted RBP12.67□□□□□ -0.38
SP140-208ENST00000473711 TDRD3Q9H7E2 651 aaKnown RBP12.67□□□□□ -0.38
SP140-208ENST00000473711 DDX4Q9NQI0 724 aaKnown RBP12.67□□□□□ -0.38
SP140-208ENST00000473711 GPHNQ9NQX3 736 aaPredicted RBP12.67□□□□□ -0.38
SP140-208ENST00000473711 ZSWIM5Q9P217 1185 aa12.67□□□□□ -0.38
SP140-208ENST00000473711 GJA3Q9Y6H8 435 aa12.67□□□□□ -0.38
SP140-208ENST00000473711 FZD9O00144 591 aa12.66□□□□□ -0.38
SP140-208ENST00000473711 PRDM1O75626 825 aa12.66□□□□□ -0.38
SP140-208ENST00000473711 LMNB1P20700 586 aa12.66□□□□□ -0.38
SP140-208ENST00000473711 PLCD1P51178 756 aa12.66□□□□□ -0.38
SP140-208ENST00000473711 CACNB3P54284 484 aa12.66□□□□□ -0.38
SP140-208ENST00000473711 APOBRQ0VD83 1088 aa12.66□□□□□ -0.38
SP140-208ENST00000473711 STK3Q13188 491 aa12.66□□□□□ -0.38
SP140-208ENST00000473711 DLGAP5Q15398 846 aa12.66□□□□□ -0.38
SP140-208ENST00000473711 NECAB1Q8N987 351 aa12.66□□□□□ -0.38
SP140-208ENST00000473711 RNF25Q96BH1 459 aaPredicted RBP12.66□□□□□ -0.38
SP140-208ENST00000473711 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.66□□□□□ -0.38
SP140-208ENST00000473711 WDR19Q8NEZ3 1342 aa12.65□□□□□ -0.38
SP140-208ENST00000473711 ZNF646O15015 1829 aaPredicted RBP12.65□□□□□ -0.38
SP140-208ENST00000473711 ARFGEF1Q9Y6D6 1849 aa12.65□□□□□ -0.38
SP140-208ENST00000473711 POTEMA6NI47 508 aa12.65□□□□□ -0.38
SP140-208ENST00000473711 IFIT3O14879 490 aaKnown RBP12.65□□□□□ -0.38
SP140-208ENST00000473711 RANBP6O60518 1105 aaKnown RBP12.65□□□□□ -0.38
SP140-208ENST00000473711 FGRP09769 529 aa12.65□□□□□ -0.38
SP140-208ENST00000473711 PDE4BQ07343 736 aa12.65□□□□□ -0.38
SP140-208ENST00000473711 NFIAQ12857 509 aa12.65□□□□□ -0.38
SP140-208ENST00000473711 CCDC83Q8IWF9 413 aa12.65□□□□□ -0.38
SP140-208ENST00000473711 ZFPM1Q8IX07 1006 aa12.65□□□□□ -0.38
SP140-208ENST00000473711 ZNF784Q8NCA9 323 aaPredicted RBP12.65□□□□□ -0.38
SP140-208ENST00000473711 ESR2Q92731 530 aa12.65□□□□□ -0.38
SP140-208ENST00000473711 ZKSCAN3Q9BRR0 538 aa12.65□□□□□ -0.38
SP140-208ENST00000473711 AGXT2Q9BYV1 514 aa12.65□□□□□ -0.38
SP140-208ENST00000473711 SH2B1Q9NRF2 756 aaPredicted RBP12.65□□□□□ -0.38
SP140-208ENST00000473711 NAP1L2Q9ULW6 460 aaPredicted RBP12.65□□□□□ -0.38
SP140-208ENST00000473711 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.65□□□□□ -0.38
SP140-208ENST00000473711 BAZ2AQ9UIF9 1905 aaKnown RBP12.64□□□□□ -0.39
SP140-208ENST00000473711 SHTN1A0MZ66 631 aa12.64□□□□□ -0.39
SP140-208ENST00000473711 SH2B2O14492 632 aaPredicted RBP12.64□□□□□ -0.39
SP140-208ENST00000473711 ORC4O43929 436 aa12.64□□□□□ -0.39
SP140-208ENST00000473711 PCP11498 1178 aaKnown RBP12.64□□□□□ -0.39
SP140-208ENST00000473711 GMPSP49915 693 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms