RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	XAGE2	Q96GT9	111 aa		11.98	□□□□□ -0.49
MCF2L-223	ENST00000473345	DNAJC18	Q9H819	358 aa		11.98	□□□□□ -0.49
MCF2L-223	ENST00000473345	TXNRD2	Q9NNW7	524 aa		11.98	□□□□□ -0.49
MCF2L-223	ENST00000473345	HMG20B	Q9P0W2	317 aa		11.98	□□□□□ -0.49
MCF2L-223	ENST00000473345	NOB1	Q9ULX3	412 aa	Known RBP	11.98	□□□□□ -0.49
MCF2L-223	ENST00000473345	NR2E3	Q9Y5X4	410 aa		11.98	□□□□□ -0.49
MCF2L-223	ENST00000473345	PFAS	O15067	1338 aa		11.97	□□□□□ -0.49
MCF2L-223	ENST00000473345		A0A1B0GUL7	405 aa		11.97	□□□□□ -0.49
MCF2L-223	ENST00000473345	SEMA3E	O15041	775 aa		11.97	□□□□□ -0.49
MCF2L-223	ENST00000473345	UBTFL1	P0CB47	393 aa	Predicted RBP	11.97	□□□□□ -0.49
MCF2L-223	ENST00000473345	IL15	P40933	162 aa	Predicted RBP	11.97	□□□□□ -0.49
MCF2L-223	ENST00000473345	FAM110C	Q1W6H9	321 aa		11.97	□□□□□ -0.49
MCF2L-223	ENST00000473345	C7orf61	Q8IZ16	206 aa		11.97	□□□□□ -0.49
MCF2L-223	ENST00000473345	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.97	□□□□□ -0.49
MCF2L-223	ENST00000473345	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.97	□□□□□ -0.49
MCF2L-223	ENST00000473345	FBXO3	Q9UK99	471 aa		11.97	□□□□□ -0.49
MCF2L-223	ENST00000473345	PDS5A	Q29RF7	1337 aa	Known RBP	11.96	□□□□□ -0.49
MCF2L-223	ENST00000473345		E9PSI1	815 aa		11.96	□□□□□ -0.49
MCF2L-223	ENST00000473345	TBC1D12	O60347	775 aa		11.96	□□□□□ -0.49
MCF2L-223	ENST00000473345	ADGRA1	Q86SQ6	560 aa		11.96	□□□□□ -0.49
MCF2L-223	ENST00000473345	DZIP1	Q86YF9	867 aa	Known RBP	11.96	□□□□□ -0.49
MCF2L-223	ENST00000473345	SLC17A8	Q8NDX2	589 aa		11.96	□□□□□ -0.49
MCF2L-223	ENST00000473345	NSUN4	Q96CB9	384 aa	Known RBP	11.96	□□□□□ -0.49
MCF2L-223	ENST00000473345	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.96	□□□□□ -0.49
MCF2L-223	ENST00000473345	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
MCF2L-223	ENST00000473345	SMC4	Q9NTJ3	1288 aa		11.96	□□□□□ -0.49
MCF2L-223	ENST00000473345	GNL3L	Q9NVN8	582 aa	Known RBP	11.96	□□□□□ -0.49
MCF2L-223	ENST00000473345	DDX60L	Q5H9U9	1706 aa	Known RBP	11.96	□□□□□ -0.49
MCF2L-223	ENST00000473345	CAP2	P40123	477 aa		11.95	□□□□□ -0.5
MCF2L-223	ENST00000473345	MCAM	P43121	646 aa		11.95	□□□□□ -0.5
MCF2L-223	ENST00000473345	MAGEA10	P43363	369 aa	Predicted RBP	11.95	□□□□□ -0.5
MCF2L-223	ENST00000473345		Q3C1V9	767 aa		11.95	□□□□□ -0.5
MCF2L-223	ENST00000473345	ALDH1L2	Q3SY69	923 aa		11.95	□□□□□ -0.5
MCF2L-223	ENST00000473345	SH3D19	Q5HYK7	790 aa		11.95	□□□□□ -0.5
MCF2L-223	ENST00000473345	MAP3K21	Q5TCX8	1036 aa		11.95	□□□□□ -0.5
MCF2L-223	ENST00000473345	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.95	□□□□□ -0.5
MCF2L-223	ENST00000473345	ZNF280C	Q8ND82	737 aa		11.95	□□□□□ -0.5
MCF2L-223	ENST00000473345	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.95	□□□□□ -0.5
MCF2L-223	ENST00000473345		A0A1W2PPC1	479 aa		11.94	□□□□□ -0.5
MCF2L-223	ENST00000473345	NPM3	O75607	178 aa	Known RBP	11.94	□□□□□ -0.5
MCF2L-223	ENST00000473345	HMGCR	P04035	888 aa		11.94	□□□□□ -0.5
MCF2L-223	ENST00000473345	BMP8B	P34820	402 aa		11.94	□□□□□ -0.5
MCF2L-223	ENST00000473345	CCL14	Q16627	93 aa		11.94	□□□□□ -0.5
MCF2L-223	ENST00000473345	NECAB2	Q7Z6G3	386 aa		11.94	□□□□□ -0.5
MCF2L-223	ENST00000473345	COA7	Q96BR5	231 aa		11.94	□□□□□ -0.5
MCF2L-223	ENST00000473345	P2RX7	Q99572	595 aa	Known RBP	11.94	□□□□□ -0.5
MCF2L-223	ENST00000473345	PORCN	Q9H237	461 aa		11.94	□□□□□ -0.5
MCF2L-223	ENST00000473345	MORF4L1	Q9UBU8	362 aa		11.94	□□□□□ -0.5
MCF2L-223	ENST00000473345	OGDHL	Q9ULD0	1010 aa		11.94	□□□□□ -0.5
MCF2L-223	ENST00000473345	ATAD5	Q96QE3	1844 aa		11.94	□□□□□ -0.5
MCF2L-223	ENST00000473345	COL2A1	P02458	1487 aa	Predicted RBP	11.94	□□□□□ -0.5
MCF2L-223	ENST00000473345	PNMA6E	A0A0J9YXQ4	647 aa		11.93	□□□□□ -0.5
MCF2L-223	ENST00000473345	CYP2B6	P20813	491 aa		11.93	□□□□□ -0.5
MCF2L-223	ENST00000473345	MTX1	Q13505	466 aa		11.93	□□□□□ -0.5
MCF2L-223	ENST00000473345	MTMR2	Q13614	643 aa		11.93	□□□□□ -0.5
MCF2L-223	ENST00000473345	ERICH6	Q7L0X2	663 aa		11.93	□□□□□ -0.5
MCF2L-223	ENST00000473345	USP6NL	Q92738	828 aa		11.93	□□□□□ -0.5
MCF2L-223	ENST00000473345	RBPJL	Q9UBG7	517 aa		11.93	□□□□□ -0.5
MCF2L-223	ENST00000473345	RPTOR	Q8N122	1335 aa		11.92	□□□□□ -0.5
MCF2L-223	ENST00000473345	COL6A1	P12109	1028 aa		11.92	□□□□□ -0.5
MCF2L-223	ENST00000473345	ARID4A	P29374	1257 aa	Predicted RBP	11.92	□□□□□ -0.5
MCF2L-223	ENST00000473345	CCND3	P30281	292 aa	Predicted RBP	11.92	□□□□□ -0.5
MCF2L-223	ENST00000473345	LRRC26	Q2I0M4	334 aa		11.92	□□□□□ -0.5
MCF2L-223	ENST00000473345	LHX8	Q68G74	356 aa		11.92	□□□□□ -0.5
MCF2L-223	ENST00000473345	ZGPAT	Q8N5A5	531 aa	Known RBP	11.92	□□□□□ -0.5
MCF2L-223	ENST00000473345	SPATA5	Q8NB90	893 aa		11.92	□□□□□ -0.5
MCF2L-223	ENST00000473345	SNRK	Q9NRH2	765 aa		11.92	□□□□□ -0.5
MCF2L-223	ENST00000473345	MTMR10	Q9NXD2	777 aa		11.92	□□□□□ -0.5
MCF2L-223	ENST00000473345	USP17L5	A8MUK1	530 aa		11.91	□□□□□ -0.5
MCF2L-223	ENST00000473345	SRGAP3	O43295	1099 aa		11.91	□□□□□ -0.5
MCF2L-223	ENST00000473345	CNMD	O75829	334 aa		11.91	□□□□□ -0.5
MCF2L-223	ENST00000473345	GDF11	O95390	407 aa		11.91	□□□□□ -0.5
MCF2L-223	ENST00000473345	PRKAR2A	P13861	404 aa	Known RBP	11.91	□□□□□ -0.5
MCF2L-223	ENST00000473345	CACNB2	Q08289	660 aa	Predicted RBP	11.91	□□□□□ -0.5
MCF2L-223	ENST00000473345	METTL16	Q86W50	562 aa	Known RBP	11.91	□□□□□ -0.5
MCF2L-223	ENST00000473345	DEFB123	Q8N688	67 aa		11.91	□□□□□ -0.5
MCF2L-223	ENST00000473345	NEUROD6	Q96NK8	337 aa		11.91	□□□□□ -0.5
MCF2L-223	ENST00000473345	NBPF3	Q9H094	633 aa		11.91	□□□□□ -0.5
MCF2L-223	ENST00000473345	C11orf49	Q9H6J7	331 aa		11.91	□□□□□ -0.5
MCF2L-223	ENST00000473345	HMX1	Q9NP08	348 aa	Predicted RBP	11.91	□□□□□ -0.5
MCF2L-223	ENST00000473345	EMILIN3	Q9NT22	766 aa		11.91	□□□□□ -0.5
MCF2L-223	ENST00000473345	FLRT1	Q9NZU1	646 aa		11.91	□□□□□ -0.5
MCF2L-223	ENST00000473345	GCLC	P48506	637 aa	Predicted RBP	11.9	□□□□□ -0.5
MCF2L-223	ENST00000473345	RARS	P54136	660 aa	Known RBP	11.9	□□□□□ -0.5
MCF2L-223	ENST00000473345	BACE1	P56817	501 aa		11.9	□□□□□ -0.5
MCF2L-223	ENST00000473345	HERVK_113	P62684	666 aa		11.9	□□□□□ -0.5
MCF2L-223	ENST00000473345	EVX2	Q03828	476 aa		11.9	□□□□□ -0.5
MCF2L-223	ENST00000473345	MVP	Q14764	893 aa	Known RBP	11.9	□□□□□ -0.5
MCF2L-223	ENST00000473345	LRIT3	Q3SXY7	679 aa		11.9	□□□□□ -0.5
MCF2L-223	ENST00000473345	MORN1	Q5T089	497 aa		11.9	□□□□□ -0.5
MCF2L-223	ENST00000473345	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.9	□□□□□ -0.5
MCF2L-223	ENST00000473345	MAPKAPK5	Q8IW41	473 aa		11.9	□□□□□ -0.5
MCF2L-223	ENST00000473345	TEX11	Q8IYF3	940 aa		11.9	□□□□□ -0.5
MCF2L-223	ENST00000473345	ANKLE1	Q8NAG6	615 aa		11.9	□□□□□ -0.5
MCF2L-223	ENST00000473345	WDR18	Q9BV38	432 aa		11.9	□□□□□ -0.5
MCF2L-223	ENST00000473345	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
MCF2L-223	ENST00000473345	PNMA3	Q9UL41	463 aa		11.9	□□□□□ -0.5
MCF2L-223	ENST00000473345	PALD1	Q9ULE6	856 aa		11.9	□□□□□ -0.5
MCF2L-223	ENST00000473345	NDUFB9	Q9Y6M9	179 aa		11.9	□□□□□ -0.5
MCF2L-223	ENST00000473345	FLT1	P17948	1338 aa		11.89	□□□□□ -0.51

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