RNA–Protein interactions for RNA: ENST00000473270.1

APTX-218, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-218ENST00000473270 OSBPL5Q9H0X9 879 aaPredicted RBP23.92■■□□□ 1.42
APTX-218ENST00000473270 DDX4Q9NQI0 724 aaKnown RBP23.92■■□□□ 1.42
APTX-218ENST00000473270 HMG20BQ9P0W2 317 aa23.92■■□□□ 1.42
APTX-218ENST00000473270 AGTPBP1Q9UPW5 1226 aa23.92■■□□□ 1.42
APTX-218ENST00000473270 ATRNL1Q5VV63 1379 aa23.91■■□□□ 1.42
APTX-218ENST00000473270 BAG3O95817 575 aa23.91■■□□□ 1.42
APTX-218ENST00000473270 CAPN2P17655 700 aa23.91■■□□□ 1.42
APTX-218ENST00000473270 NR2E3Q9Y5X4 410 aa23.91■■□□□ 1.42
APTX-218ENST00000473270 ZSWIM8A7E2V4 1837 aa23.9■■□□□ 1.42
APTX-218ENST00000473270 H0YGN5 161 aa23.9■■□□□ 1.42
APTX-218ENST00000473270 PLCG2P16885 1265 aa23.9■■□□□ 1.42
APTX-218ENST00000473270 CCDC158Q5M9N0 1113 aa23.9■■□□□ 1.42
APTX-218ENST00000473270 TEX11Q8IYF3 940 aa23.9■■□□□ 1.42
APTX-218ENST00000473270 PROCA1Q8NCQ7 364 aaPredicted RBP23.9■■□□□ 1.42
APTX-218ENST00000473270 AS3MTQ9HBK9 375 aa23.9■■□□□ 1.42
APTX-218ENST00000473270 COLQQ9Y215 455 aaPredicted RBP23.9■■□□□ 1.42
APTX-218ENST00000473270 BRCA2P51587 3418 aa23.9■■□□□ 1.42
APTX-218ENST00000473270 FLT3LGP49771 235 aa23.89■■□□□ 1.41
APTX-218ENST00000473270 TTC39AQ5SRH9 613 aa23.89■■□□□ 1.41
APTX-218ENST00000473270 NSUN4Q96CB9 384 aaKnown RBP23.89■■□□□ 1.41
APTX-218ENST00000473270 RFX7Q2KHR2 1363 aa23.89■■□□□ 1.41
APTX-218ENST00000473270 TFRCP02786 760 aaKnown RBP23.88■■□□□ 1.41
APTX-218ENST00000473270 ARID4AP29374 1257 aaPredicted RBP23.88■■□□□ 1.41
APTX-218ENST00000473270 RHBDL3P58872 404 aa23.88■■□□□ 1.41
APTX-218ENST00000473270 TBC1D9Q6ZT07 1266 aa23.88■■□□□ 1.41
APTX-218ENST00000473270 ANKRD13CQ8N6S4 541 aa23.88■■□□□ 1.41
APTX-218ENST00000473270 ZNF280CQ8ND82 737 aa23.88■■□□□ 1.41
APTX-218ENST00000473270 PXYLP1Q8TE99 480 aa23.88■■□□□ 1.41
APTX-218ENST00000473270 HERC5Q9UII4 1024 aaKnown RBP23.88■■□□□ 1.41
APTX-218ENST00000473270 GABRQQ9UN88 632 aa23.88■■□□□ 1.41
APTX-218ENST00000473270 GCLCP48506 637 aaPredicted RBP23.87■■□□□ 1.41
APTX-218ENST00000473270 SPP2Q13103 211 aa23.87■■□□□ 1.41
APTX-218ENST00000473270 NAA16Q6N069 864 aaPredicted RBP23.87■■□□□ 1.41
APTX-218ENST00000473270 U2AF1L4Q8WU68 220 aaKnown RBP23.87■■□□□ 1.41
APTX-218ENST00000473270 DHX36Q9H2U1 1008 aaKnown RBP23.87■■□□□ 1.41
APTX-218ENST00000473270 USP17L5A8MUK1 530 aa23.86■■□□□ 1.41
APTX-218ENST00000473270 FARP2O94887 1054 aaPredicted RBP23.86■■□□□ 1.41
APTX-218ENST00000473270 PI16Q6UXB8 463 aa23.86■■□□□ 1.41
APTX-218ENST00000473270 PI4KBQ9UBF8 816 aa23.86■■□□□ 1.41
APTX-218ENST00000473270 FAM196BA6NMK8 535 aa23.85■■□□□ 1.41
APTX-218ENST00000473270 IRF5Q13568 498 aa23.85■■□□□ 1.41
APTX-218ENST00000473270 FAM110CQ1W6H9 321 aa23.85■■□□□ 1.41
APTX-218ENST00000473270 CRACR2BQ8N4Y2 399 aaPredicted RBP23.85■■□□□ 1.41
APTX-218ENST00000473270 SHISA4Q96DD7 197 aa23.85■■□□□ 1.41
APTX-218ENST00000473270 CRBNQ96SW2 442 aa23.85■■□□□ 1.41
APTX-218ENST00000473270 UNC93B1Q9H1C4 597 aa23.85■■□□□ 1.41
APTX-218ENST00000473270 TMOD4Q9NZQ9 345 aa23.85■■□□□ 1.41
APTX-218ENST00000473270 DOCK1Q14185 1865 aa23.85■■□□□ 1.41
APTX-218ENST00000473270 SGPL1O95470 568 aa23.84■■□□□ 1.41
APTX-218ENST00000473270 INHAP05111 366 aa23.84■■□□□ 1.41
APTX-218ENST00000473270 ELNP15502 786 aa23.84■■□□□ 1.41
APTX-218ENST00000473270 CAP2P40123 477 aa23.84■■□□□ 1.41
APTX-218ENST00000473270 FXR1P51114 621 aaKnown RBP eCLIP23.84■■□□□ 1.41
APTX-218ENST00000473270 HMGCS2P54868 508 aa23.84■■□□□ 1.41
APTX-218ENST00000473270 CHRDL2Q6WN34 429 aa23.84■■□□□ 1.41
APTX-218ENST00000473270 COL2A1P02458 1487 aaPredicted RBP23.83■■□□□ 1.41
APTX-218ENST00000473270 PNMA6EA0A0J9YXQ4 647 aa23.83■■□□□ 1.41
APTX-218ENST00000473270 MCAMP43121 646 aa23.83■■□□□ 1.41
APTX-218ENST00000473270 IRX3P78415 501 aaPredicted RBP23.83■■□□□ 1.41
APTX-218ENST00000473270 TREML2Q5T2D2 321 aa23.83■■□□□ 1.41
APTX-218ENST00000473270 CCDC84Q86UT8 332 aaPredicted RBP23.83■■□□□ 1.41
APTX-218ENST00000473270 ZBTB40Q9NUA8 1239 aa23.83■■□□□ 1.41
APTX-218ENST00000473270 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.83■■□□□ 1.41
APTX-218ENST00000473270 SLURP2P0DP57 97 aa23.82■■□□□ 1.4
APTX-218ENST00000473270 CCAR1Q8IX12 1150 aaKnown RBP23.82■■□□□ 1.4
APTX-218ENST00000473270 GPR108Q9NPR9 543 aa23.82■■□□□ 1.4
APTX-218ENST00000473270 AATFQ9NY61 560 aaKnown RBP eCLIP23.82■■□□□ 1.4
APTX-218ENST00000473270 EVI5O60447 810 aa23.81■■□□□ 1.4
APTX-218ENST00000473270 IGSF3O75054 1194 aa23.81■■□□□ 1.4
APTX-218ENST00000473270 HLA-DOAP06340 250 aa23.81■■□□□ 1.4
APTX-218ENST00000473270 ASNSP08243 561 aa23.81■■□□□ 1.4
APTX-218ENST00000473270 AAMPQ13685 434 aa23.81■■□□□ 1.4
APTX-218ENST00000473270 SH3RF3Q8TEJ3 882 aaPredicted RBP23.81■■□□□ 1.4
APTX-218ENST00000473270 DEFB118Q96PH6 123 aa23.81■■□□□ 1.4
APTX-218ENST00000473270 C1orf115Q9H7X2 142 aa23.81■■□□□ 1.4
APTX-218ENST00000473270 SNRKQ9NRH2 765 aa23.81■■□□□ 1.4
APTX-218ENST00000473270 SURF6O75683 361 aaKnown RBP23.8■■□□□ 1.4
APTX-218ENST00000473270 TNNI3KQ59H18 835 aa23.8■■□□□ 1.4
APTX-218ENST00000473270 ZNF384Q8TF68 577 aa23.8■■□□□ 1.4
APTX-218ENST00000473270 TGFBRAP1Q8WUH2 860 aa23.8■■□□□ 1.4
APTX-218ENST00000473270 FPGT-TNNI3KV9GXZ4 949 aa23.8■■□□□ 1.4
APTX-218ENST00000473270 MGAMO43451 1857 aa23.79■■□□□ 1.4
APTX-218ENST00000473270 CERS3Q8IU89 383 aa23.79■■□□□ 1.4
APTX-218ENST00000473270 FOXP4Q8IVH2 680 aaPredicted RBP23.79■■□□□ 1.4
APTX-218ENST00000473270 ASCC2Q9H1I8 757 aaPredicted RBP23.79■■□□□ 1.4
APTX-218ENST00000473270 GINM1Q9NU53 330 aa23.79■■□□□ 1.4
APTX-218ENST00000473270 NEFLP07196 543 aa23.78■■□□□ 1.4
APTX-218ENST00000473270 RPAP2Q8IXW5 612 aaPredicted RBP23.78■■□□□ 1.4
APTX-218ENST00000473270 CWC22Q9HCG8 908 aaKnown RBP23.78■■□□□ 1.4
APTX-218ENST00000473270 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.78■■□□□ 1.4
APTX-218ENST00000473270 C19orf81C9J6K1 198 aa23.77■■□□□ 1.4
APTX-218ENST00000473270 HMGCRP04035 888 aa23.77■■□□□ 1.4
APTX-218ENST00000473270 IRX6P78412 446 aaPredicted RBP23.77■■□□□ 1.4
APTX-218ENST00000473270 ATP8B2P98198 1209 aa23.77■■□□□ 1.4
APTX-218ENST00000473270 MTMR2Q13614 643 aa23.77■■□□□ 1.4
APTX-218ENST00000473270 MAPKAPK5Q8IW41 473 aa23.77■■□□□ 1.4
APTX-218ENST00000473270 BACE1P56817 501 aa23.76■■□□□ 1.39
APTX-218ENST00000473270 SH3D19Q5HYK7 790 aa23.76■■□□□ 1.39
APTX-218ENST00000473270 NECAB2Q7Z6G3 386 aa23.76■■□□□ 1.39
APTX-218ENST00000473270 UBE2Q1Q7Z7E8 422 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms