RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 GRM8O00222 908 aa12.9□□□□□ -0.34
HDAC3-203ENST00000467533 SLURP2P0DP57 97 aa12.9□□□□□ -0.34
HDAC3-203ENST00000467533 HMGCS2P54868 508 aa12.9□□□□□ -0.34
HDAC3-203ENST00000467533 IL27Q8NEV9 243 aa12.9□□□□□ -0.34
HDAC3-203ENST00000467533 WDR66Q8TBY9 1149 aa12.9□□□□□ -0.34
HDAC3-203ENST00000467533 PPM1EQ8WY54 764 aa12.9□□□□□ -0.34
HDAC3-203ENST00000467533 BADQ92934 168 aa12.9□□□□□ -0.34
HDAC3-203ENST00000467533 UHRF1Q96T88 793 aaPredicted RBP12.9□□□□□ -0.34
HDAC3-203ENST00000467533 MORF4L1Q9UBU8 362 aa12.9□□□□□ -0.34
HDAC3-203ENST00000467533 F6X3S4 739 aa12.89□□□□□ -0.35
HDAC3-203ENST00000467533 ENTPD3O75355 529 aa12.89□□□□□ -0.35
HDAC3-203ENST00000467533 PRDX5P30044 214 aa12.89□□□□□ -0.35
HDAC3-203ENST00000467533 RGS2P41220 211 aa12.89□□□□□ -0.35
HDAC3-203ENST00000467533 IRX3P78415 501 aaPredicted RBP12.89□□□□□ -0.35
HDAC3-203ENST00000467533 CCL14Q16627 93 aa12.89□□□□□ -0.35
HDAC3-203ENST00000467533 BEND3Q5T5X7 828 aa12.89□□□□□ -0.35
HDAC3-203ENST00000467533 ATXN2LQ8WWM7 1075 aaKnown RBP12.89□□□□□ -0.35
HDAC3-203ENST00000467533 APBA2Q99767 749 aa12.89□□□□□ -0.35
HDAC3-203ENST00000467533 C9orf78Q9NZ63 289 aaPredicted RBP12.89□□□□□ -0.35
HDAC3-203ENST00000467533 THEGQ9P2T0 379 aa12.89□□□□□ -0.35
HDAC3-203ENST00000467533 PDE8BO95263 885 aa12.88□□□□□ -0.35
HDAC3-203ENST00000467533 IFIT1P09914 478 aaKnown RBP12.88□□□□□ -0.35
HDAC3-203ENST00000467533 SPP2Q13103 211 aa12.88□□□□□ -0.35
HDAC3-203ENST00000467533 GRIN2CQ14957 1233 aa12.88□□□□□ -0.35
HDAC3-203ENST00000467533 LRRC24Q50LG9 513 aa12.88□□□□□ -0.35
HDAC3-203ENST00000467533 SH3BP5LQ7L8J4 393 aa12.88□□□□□ -0.35
HDAC3-203ENST00000467533 CCAR1Q8IX12 1150 aaKnown RBP12.88□□□□□ -0.35
HDAC3-203ENST00000467533 RNPC3Q96LT9 517 aaKnown RBP12.88□□□□□ -0.35
HDAC3-203ENST00000467533 CWC22Q9HCG8 908 aaKnown RBP12.88□□□□□ -0.35
HDAC3-203ENST00000467533 HCN4Q9Y3Q4 1203 aa12.88□□□□□ -0.35
HDAC3-203ENST00000467533 RFX7Q2KHR2 1363 aa12.88□□□□□ -0.35
HDAC3-203ENST00000467533 KIF16BQ96L93 1317 aa12.88□□□□□ -0.35
HDAC3-203ENST00000467533 DDTLA6NHG4 134 aaPredicted RBP12.87□□□□□ -0.35
HDAC3-203ENST00000467533 DNM1LO00429 736 aa12.87□□□□□ -0.35
HDAC3-203ENST00000467533 PEX10O60683 326 aa12.87□□□□□ -0.35
HDAC3-203ENST00000467533 LDHBP07195 334 aaKnown RBP12.87□□□□□ -0.35
HDAC3-203ENST00000467533 MAPK4P31152 587 aa12.87□□□□□ -0.35
HDAC3-203ENST00000467533 PICALMQ13492 652 aa12.87□□□□□ -0.35
HDAC3-203ENST00000467533 VGLL2Q8N8G2 317 aa12.87□□□□□ -0.35
HDAC3-203ENST00000467533 ZNF280CQ8ND82 737 aa12.87□□□□□ -0.35
HDAC3-203ENST00000467533 ASB2Q96Q27 587 aa12.87□□□□□ -0.35
HDAC3-203ENST00000467533 IDI2Q9BXS1 227 aa12.87□□□□□ -0.35
HDAC3-203ENST00000467533 SYNGAP1Q96PV0 1343 aa12.87□□□□□ -0.35
HDAC3-203ENST00000467533 FAM196BA6NMK8 535 aa12.86□□□□□ -0.35
HDAC3-203ENST00000467533 DNAJB2P25686 324 aa12.86□□□□□ -0.35
HDAC3-203ENST00000467533 CNGA1P29973 690 aa12.86□□□□□ -0.35
HDAC3-203ENST00000467533 MAP3K10Q02779 954 aa12.86□□□□□ -0.35
HDAC3-203ENST00000467533 PUM3Q15397 648 aaKnown RBP12.86□□□□□ -0.35
HDAC3-203ENST00000467533 GPRC5AQ8NFJ5 357 aa12.86□□□□□ -0.35
HDAC3-203ENST00000467533 SUCLG2Q96I99 432 aa12.86□□□□□ -0.35
HDAC3-203ENST00000467533 GAS2L1Q99501 681 aaPredicted RBP12.86□□□□□ -0.35
HDAC3-203ENST00000467533 C1QTNF1Q9BXJ1 281 aa12.86□□□□□ -0.35
HDAC3-203ENST00000467533 TBC1D2Q9BYX2 928 aa12.86□□□□□ -0.35
HDAC3-203ENST00000467533 DDX20Q9UHI6 824 aaKnown RBP12.86□□□□□ -0.35
HDAC3-203ENST00000467533 MSCO60682 206 aa12.85□□□□□ -0.35
HDAC3-203ENST00000467533 MRPS5P82675 430 aaKnown RBP12.85□□□□□ -0.35
HDAC3-203ENST00000467533 TRIM60Q495X7 471 aa12.85□□□□□ -0.35
HDAC3-203ENST00000467533 MFSD14CQ5VZR4 134 aa12.85□□□□□ -0.35
HDAC3-203ENST00000467533 GPR142Q7Z601 462 aa12.85□□□□□ -0.35
HDAC3-203ENST00000467533 LPAR1Q92633 364 aa12.85□□□□□ -0.35
HDAC3-203ENST00000467533 USP6NLQ92738 828 aa12.85□□□□□ -0.35
HDAC3-203ENST00000467533 OSBPL5Q9H0X9 879 aaPredicted RBP12.85□□□□□ -0.35
HDAC3-203ENST00000467533 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.85□□□□□ -0.35
HDAC3-203ENST00000467533 TXNRD2Q9NNW7 524 aa12.85□□□□□ -0.35
HDAC3-203ENST00000467533 PDLIM7Q9NR12 457 aa12.85□□□□□ -0.35
HDAC3-203ENST00000467533 BDP1A6H8Y1 2624 aa12.85□□□□□ -0.35
HDAC3-203ENST00000467533 SLC5A1P13866 664 aa12.84□□□□□ -0.35
HDAC3-203ENST00000467533 HERVK_113P62684 666 aa12.84□□□□□ -0.35
HDAC3-203ENST00000467533 MORN1Q5T089 497 aa12.84□□□□□ -0.35
HDAC3-203ENST00000467533 SLC39A5Q6ZMH5 540 aa12.84□□□□□ -0.35
HDAC3-203ENST00000467533 PLEKHH3Q7Z736 793 aa12.84□□□□□ -0.35
HDAC3-203ENST00000467533 PAGR1Q9BTK6 254 aa12.84□□□□□ -0.35
HDAC3-203ENST00000467533 PORCNQ9H237 461 aa12.84□□□□□ -0.35
HDAC3-203ENST00000467533 ZNF576Q9H609 170 aa12.84□□□□□ -0.35
HDAC3-203ENST00000467533 AS3MTQ9HBK9 375 aa12.84□□□□□ -0.35
HDAC3-203ENST00000467533 DDX4Q9NQI0 724 aaKnown RBP12.84□□□□□ -0.35
HDAC3-203ENST00000467533 USP17L5A8MUK1 530 aa12.83□□□□□ -0.36
HDAC3-203ENST00000467533 KBTBD13C9JR72 458 aa12.83□□□□□ -0.36
HDAC3-203ENST00000467533 ERVK-9P63128 1117 aa12.83□□□□□ -0.36
HDAC3-203ENST00000467533 ERVK-24P63145 666 aa12.83□□□□□ -0.36
HDAC3-203ENST00000467533 MTMR2Q13614 643 aa12.83□□□□□ -0.36
HDAC3-203ENST00000467533 SH3D19Q5HYK7 790 aa12.83□□□□□ -0.36
HDAC3-203ENST00000467533 GJC2Q5T442 439 aaPredicted RBP12.83□□□□□ -0.36
HDAC3-203ENST00000467533 P2RX7Q99572 595 aaKnown RBP12.83□□□□□ -0.36
HDAC3-203ENST00000467533 TMOD4Q9NZQ9 345 aa12.83□□□□□ -0.36
HDAC3-203ENST00000467533 UTYO14607 1347 aa12.83□□□□□ -0.36
HDAC3-203ENST00000467533 MYCNP04198 464 aaPredicted RBP12.82□□□□□ -0.36
HDAC3-203ENST00000467533 FGFR2P21802 821 aa12.82□□□□□ -0.36
HDAC3-203ENST00000467533 MAP2K5Q13163 448 aa12.82□□□□□ -0.36
HDAC3-203ENST00000467533 NCBP3Q53F19 620 aaKnown RBP12.82□□□□□ -0.36
HDAC3-203ENST00000467533 POTEEQ6S8J3 1075 aa12.82□□□□□ -0.36
HDAC3-203ENST00000467533 SLC4A10Q6U841 1118 aa12.82□□□□□ -0.36
HDAC3-203ENST00000467533 SH3RF1Q7Z6J0 888 aa12.82□□□□□ -0.36
HDAC3-203ENST00000467533 DZIP1Q86YF9 867 aaKnown RBP12.82□□□□□ -0.36
HDAC3-203ENST00000467533 KLHDC4Q8TBB5 520 aa12.82□□□□□ -0.36
HDAC3-203ENST00000467533 TIFAQ96CG3 184 aa12.82□□□□□ -0.36
HDAC3-203ENST00000467533 KAZALD1Q96I82 304 aa12.82□□□□□ -0.36
HDAC3-203ENST00000467533 BICC1Q9H694 974 aaKnown RBP12.82□□□□□ -0.36
HDAC3-203ENST00000467533 ARIH1Q9Y4X5 557 aaPredicted RBP12.82□□□□□ -0.36
HDAC3-203ENST00000467533 GAKO14976 1311 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms