RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 KIAA1324LA8MWY0 1029 aaPredicted RBP6.58□□□□□ -1.36
SMC4-208ENST00000467468 RING1Q06587 406 aa6.58□□□□□ -1.36
SMC4-208ENST00000467468 CDK5R2Q13319 367 aa6.58□□□□□ -1.36
SMC4-208ENST00000467468 MRPL58Q14197 206 aaKnown RBP6.58□□□□□ -1.36
SMC4-208ENST00000467468 TSNAXIP1Q2TAA8 658 aa6.58□□□□□ -1.36
SMC4-208ENST00000467468 LRFN4Q6PJG9 635 aa6.58□□□□□ -1.36
SMC4-208ENST00000467468 ZNF765Q7L2R6 523 aa6.58□□□□□ -1.36
SMC4-208ENST00000467468 CCDC84Q86UT8 332 aaPredicted RBP6.58□□□□□ -1.36
SMC4-208ENST00000467468 ZNF507Q8TCN5 953 aa6.58□□□□□ -1.36
SMC4-208ENST00000467468 PLPPR2Q96GM1 343 aa6.58□□□□□ -1.36
SMC4-208ENST00000467468 KRTAP4-6Q9BYQ5 205 aa6.58□□□□□ -1.36
SMC4-208ENST00000467468 TACC3Q9Y6A5 838 aa6.58□□□□□ -1.36
SMC4-208ENST00000467468 BPNT1O95861 308 aa6.57□□□□□ -1.36
SMC4-208ENST00000467468 FAM87AP0C7U9 286 aa6.57□□□□□ -1.36
SMC4-208ENST00000467468 ETF1P62495 437 aaKnown RBP6.57□□□□□ -1.36
SMC4-208ENST00000467468 CYFIP1Q7L576 1253 aa6.57□□□□□ -1.36
SMC4-208ENST00000467468 PHC3Q8NDX5 983 aa6.57□□□□□ -1.36
SMC4-208ENST00000467468 RSRP1Q9BUV0 290 aa6.57□□□□□ -1.36
SMC4-208ENST00000467468 PCDHB5Q9Y5E4 795 aa6.57□□□□□ -1.36
SMC4-208ENST00000467468 TFE3P19532 575 aaPredicted RBP6.56□□□□□ -1.36
SMC4-208ENST00000467468 GBP2P32456 591 aaPredicted RBP6.56□□□□□ -1.36
SMC4-208ENST00000467468 LMNB2Q03252 620 aa6.56□□□□□ -1.36
SMC4-208ENST00000467468 PTPN11Q06124 597 aaPredicted RBP6.56□□□□□ -1.36
SMC4-208ENST00000467468 INPP5AQ14642 412 aa6.56□□□□□ -1.36
SMC4-208ENST00000467468 ARHGAP27Q6ZUM4 889 aa6.56□□□□□ -1.36
SMC4-208ENST00000467468 WNT10AQ9GZT5 417 aa6.56□□□□□ -1.36
SMC4-208ENST00000467468 LRRC4CQ9HCJ2 640 aa6.56□□□□□ -1.36
SMC4-208ENST00000467468 SPINK2P20155 84 aa6.55□□□□□ -1.36
SMC4-208ENST00000467468 NTF4P34130 210 aa6.55□□□□□ -1.36
SMC4-208ENST00000467468 RPL6Q02878 288 aaKnown RBP6.55□□□□□ -1.36
SMC4-208ENST00000467468 PDE4BQ07343 736 aa6.55□□□□□ -1.36
SMC4-208ENST00000467468 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.55□□□□□ -1.36
SMC4-208ENST00000467468 HS2ST1Q7LGA3 356 aa6.55□□□□□ -1.36
SMC4-208ENST00000467468 DTX1Q86Y01 620 aa6.55□□□□□ -1.36
SMC4-208ENST00000467468 SHISA5Q8N114 240 aa6.55□□□□□ -1.36
SMC4-208ENST00000467468 TOP6BLQ8N6T0 577 aa6.55□□□□□ -1.36
SMC4-208ENST00000467468 JARID2Q92833 1246 aaPredicted RBP6.55□□□□□ -1.36
SMC4-208ENST00000467468 TMEM74Q96NL1 305 aa6.55□□□□□ -1.36
SMC4-208ENST00000467468 ANGEL1Q9UNK9 670 aaKnown RBP6.55□□□□□ -1.36
SMC4-208ENST00000467468 TLR6Q9Y2C9 796 aa6.55□□□□□ -1.36
SMC4-208ENST00000467468 LRIG2O94898 1065 aa6.54□□□□□ -1.36
SMC4-208ENST00000467468 ZC3H6P61129 1189 aaKnown RBP6.54□□□□□ -1.36
SMC4-208ENST00000467468 CAMK2GQ13555 558 aaPredicted RBP6.54□□□□□ -1.36
SMC4-208ENST00000467468 SNAP47Q5SQN1 464 aa6.54□□□□□ -1.36
SMC4-208ENST00000467468 ARMCX6Q7L4S7 300 aa6.54□□□□□ -1.36
SMC4-208ENST00000467468 HID1Q8IV36 788 aa6.54□□□□□ -1.36
SMC4-208ENST00000467468 RHOVQ96L33 236 aa6.54□□□□□ -1.36
SMC4-208ENST00000467468 DUSP23Q9BVJ7 150 aa6.54□□□□□ -1.36
SMC4-208ENST00000467468 PRDM10Q9NQV6 1147 aa6.54□□□□□ -1.36
SMC4-208ENST00000467468 BSDC1Q9NW68 430 aaPredicted RBP6.54□□□□□ -1.36
SMC4-208ENST00000467468 GTF2IRD1Q9UHL9 959 aa6.54□□□□□ -1.36
SMC4-208ENST00000467468 MED26O95402 600 aa6.53□□□□□ -1.36
SMC4-208ENST00000467468 HOXA10P31260 410 aaPredicted RBP6.53□□□□□ -1.36
SMC4-208ENST00000467468 MSMPQ1L6U9 139 aa6.53□□□□□ -1.36
SMC4-208ENST00000467468 VSIG10LQ86VR7 867 aa6.53□□□□□ -1.36
SMC4-208ENST00000467468 PSMG3-AS1Q96PY0 264 aa6.53□□□□□ -1.36
SMC4-208ENST00000467468 BACH2Q9BYV9 841 aa6.53□□□□□ -1.36
SMC4-208ENST00000467468 FOXQ1Q9C009 403 aa6.53□□□□□ -1.36
SMC4-208ENST00000467468 GFRA2O00451 464 aa6.52□□□□□ -1.37
SMC4-208ENST00000467468 SCAMP3O14828 347 aaKnown RBP6.52□□□□□ -1.37
SMC4-208ENST00000467468 WNT11O96014 354 aa6.52□□□□□ -1.37
SMC4-208ENST00000467468 PF4P02776 101 aa6.52□□□□□ -1.37
SMC4-208ENST00000467468 GRK4P32298 578 aa6.52□□□□□ -1.37
SMC4-208ENST00000467468 CAP2P40123 477 aa6.52□□□□□ -1.37
SMC4-208ENST00000467468 XP32Q5T750 250 aa6.52□□□□□ -1.37
SMC4-208ENST00000467468 ERMP1Q7Z2K6 904 aa6.52□□□□□ -1.37
SMC4-208ENST00000467468 MFSD2AQ8NA29 543 aa6.52□□□□□ -1.37
SMC4-208ENST00000467468 GATAD2BQ8WXI9 593 aa6.52□□□□□ -1.37
SMC4-208ENST00000467468 MKNK2Q9HBH9 465 aa6.52□□□□□ -1.37
SMC4-208ENST00000467468 GGT7Q9UJ14 662 aa6.52□□□□□ -1.37
SMC4-208ENST00000467468 MINDY4BA8MYZ0 360 aa6.51□□□□□ -1.37
SMC4-208ENST00000467468 F6X3S4 739 aa6.51□□□□□ -1.37
SMC4-208ENST00000467468 LEFTY1O75610 366 aa6.51□□□□□ -1.37
SMC4-208ENST00000467468 PRNPP04156 253 aa6.51□□□□□ -1.37
SMC4-208ENST00000467468 PGRP06401 933 aa6.51□□□□□ -1.37
SMC4-208ENST00000467468 CDK8P49336 464 aa6.51□□□□□ -1.37
SMC4-208ENST00000467468 LDLRAD1Q5T700 205 aa6.51□□□□□ -1.37
SMC4-208ENST00000467468 ZNF746Q6NUN9 644 aaPredicted RBP6.51□□□□□ -1.37
SMC4-208ENST00000467468 STK11IPQ8N1F8 1099 aa6.51□□□□□ -1.37
SMC4-208ENST00000467468 TMEM87AQ8NBN3 555 aa6.51□□□□□ -1.37
SMC4-208ENST00000467468 SREK1Q8WXA9 508 aaKnown RBP6.51□□□□□ -1.37
SMC4-208ENST00000467468 MISP3Q96FF7 219 aa6.51□□□□□ -1.37
SMC4-208ENST00000467468 KBTBD4Q9NVX7 518 aa6.51□□□□□ -1.37
SMC4-208ENST00000467468 ZC3H7BQ9UGR2 993 aaKnown RBP6.51□□□□□ -1.37
SMC4-208ENST00000467468 ADAM30Q9UKF2 790 aa6.51□□□□□ -1.37
SMC4-208ENST00000467468 GNAT3A8MTJ3 354 aa6.5□□□□□ -1.37
SMC4-208ENST00000467468 CILPO75339 1184 aa6.5□□□□□ -1.37
SMC4-208ENST00000467468 F13A1P00488 732 aa6.5□□□□□ -1.37
SMC4-208ENST00000467468 HDLBPQ00341 1268 aaKnown RBP6.5□□□□□ -1.37
SMC4-208ENST00000467468 BNC2Q6ZN30 1099 aaPredicted RBP6.5□□□□□ -1.37
SMC4-208ENST00000467468 UBE3DQ7Z6J8 389 aa6.5□□□□□ -1.37
SMC4-208ENST00000467468 GOLM1Q8NBJ4 401 aa6.5□□□□□ -1.37
SMC4-208ENST00000467468 NETO1Q8TDF5 533 aa6.5□□□□□ -1.37
SMC4-208ENST00000467468 FBXL18Q96ME1 805 aa6.5□□□□□ -1.37
SMC4-208ENST00000467468 FBRSQ9HAH7 460 aa6.5□□□□□ -1.37
SMC4-208ENST00000467468 PRDM5Q9NQX1 630 aaPredicted RBP6.5□□□□□ -1.37
SMC4-208ENST00000467468 METTL5Q9NRN9 209 aaKnown RBP6.5□□□□□ -1.37
SMC4-208ENST00000467468 SUPT16HQ9Y5B9 1047 aaKnown RBP6.5□□□□□ -1.37
SMC4-208ENST00000467468 ROBO2Q9HCK4 1378 aa6.49□□□□□ -1.37
SMC4-208ENST00000467468 IGF2BP3O00425 579 aaKnown RBP eCLIP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms