RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 USP16Q9Y5T5 823 aa10.73□□□□□ -0.69
SCAF11-205ENST00000465950 RNF17Q9BXT8 1623 aaKnown RBP10.73□□□□□ -0.69
SCAF11-205ENST00000465950 KDM4AO75164 1064 aa10.73□□□□□ -0.69
SCAF11-205ENST00000465950 APPBP2Q92624 585 aa10.73□□□□□ -0.69
SCAF11-205ENST00000465950 STX10O60499 249 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 CAPN15O75808 1086 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 ANXA1P04083 346 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 CTCFP49711 727 aaPredicted RBP10.72□□□□□ -0.69
SCAF11-205ENST00000465950 URGCPQ8TCY9 931 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 COMMD10Q9Y6G5 202 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 SMTNL1A8MU46 457 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 MBD4O95243 580 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 ALAS1P13196 640 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 RPL13P26373 211 aaKnown RBP10.72□□□□□ -0.69
SCAF11-205ENST00000465950 RBM25P49756 843 aaKnown RBP10.72□□□□□ -0.69
SCAF11-205ENST00000465950 KIF11P52732 1056 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 CHRNDQ07001 517 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 SFSWAPQ12872 951 aaKnown RBP10.72□□□□□ -0.69
SCAF11-205ENST00000465950 KIFC2Q96AC6 838 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 NACC1Q96RE7 527 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 DIP2CQ9Y2E4 1556 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 A0A1B0GUL7 405 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 M0R2C6 588 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 CIAO1O76071 339 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 RNASELQ05823 741 aaKnown RBP10.72□□□□□ -0.69
SCAF11-205ENST00000465950 NBPF20Q3BBV1 942 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 NSMCE1Q8WV22 266 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 NEK1Q96PY6 1258 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 EFCC1Q9HA90 598 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 PRDM5Q9NQX1 630 aaPredicted RBP10.72□□□□□ -0.69
SCAF11-205ENST00000465950 hCG_1984214I3L0E3 225 aa10.72□□□□□ -0.69
SCAF11-205ENST00000465950 SSR1P43307 286 aaKnown RBP10.72□□□□□ -0.69
SCAF11-205ENST00000465950 USP17L15C9J2P7 530 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 USP17L13C9JLJ4 530 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 USP17L11C9JVI0 530 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 USP17L18D6R9N7 530 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 USP17L22D6RA61 530 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 USP17L17D6RBQ6 530 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 USP17L19D6RCP7 530 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 USP17L20D6RJB6 530 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 DPYSL4O14531 572 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 USP17L24Q0WX57 530 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 XAGE2Q96GT9 111 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 NUDT12Q9BQG2 462 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 AMNQ9BXJ7 453 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 GCC2Q8IWJ2 1684 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 FCER1AP12319 257 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 DPEP1P16444 411 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 CCND2P30279 289 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 RGS2P41220 211 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 MRPS9P82933 396 aaKnown RBP10.71□□□□□ -0.69
SCAF11-205ENST00000465950 KRT25Q7Z3Z0 450 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 FAM167AQ96KS9 214 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 MIS12Q9H081 205 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 HERC5Q9UII4 1024 aaKnown RBP10.71□□□□□ -0.69
SCAF11-205ENST00000465950 CCPG1Q9ULG6 757 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 ADCY7P51828 1080 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 MICALL2Q8IY33 904 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 TGFBRAP1Q8WUH2 860 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 FNBP1Q96RU3 617 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 WRNIP1Q96S55 665 aa10.71□□□□□ -0.69
SCAF11-205ENST00000465950 CLRN2A0PK11 232 aa10.71□□□□□ -0.7
SCAF11-205ENST00000465950 TNNQ9UQP3 1299 aa10.71□□□□□ -0.7
SCAF11-205ENST00000465950 LMTK2Q8IWU2 1503 aa10.71□□□□□ -0.7
SCAF11-205ENST00000465950 TRPC3Q13507 836 aa10.71□□□□□ -0.7
SCAF11-205ENST00000465950 ALS2CR12Q96Q35 445 aa10.71□□□□□ -0.7
SCAF11-205ENST00000465950 ACBD3Q9H3P7 528 aa10.71□□□□□ -0.7
SCAF11-205ENST00000465950 ZNF277Q9NRM2 450 aaPredicted RBP10.71□□□□□ -0.7
SCAF11-205ENST00000465950 ARHGEF35A5YM69 484 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 MSCO60682 206 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 SLC25A27O95847 323 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 ZNF569Q5MCW4 686 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 ATP6V0A1Q93050 837 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 GAS8O95995 478 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 TOP1P11387 765 aaKnown RBP10.7□□□□□ -0.7
SCAF11-205ENST00000465950 EZRP15311 586 aaKnown RBP10.7□□□□□ -0.7
SCAF11-205ENST00000465950 STRIP1Q5VSL9 837 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 MAPKAPK5Q8IW41 473 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 MIGA1Q8NAN2 632 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 GPR108Q9NPR9 543 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 A0A0G2JLW4 131 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 WDR44Q5JSH3 913 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 TICAM2Q86XR7 235 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 GPCPD1Q9NPB8 672 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 PRDM15P57071 1507 aaPredicted RBP10.7□□□□□ -0.7
SCAF11-205ENST00000465950 SUPT20HL2P0C7V6 817 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 SCNN1DP51172 638 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 CCDC40Q4G0X9 1142 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 YAF2Q8IY57 180 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 GTF3C6Q969F1 213 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 AATFQ9NY61 560 aaKnown RBP eCLIP10.7□□□□□ -0.7
SCAF11-205ENST00000465950 MSRAQ9UJ68 235 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 KDRP35968 1356 aa10.7□□□□□ -0.7
SCAF11-205ENST00000465950 NBPF26B4DH59 902 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 FKTNO75072 461 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 SLU7O95391 586 aaKnown RBP10.69□□□□□ -0.7
SCAF11-205ENST00000465950 FBXO11Q86XK2 927 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 RRAGCQ9HB90 399 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 MRVI1Q9Y6F6 885 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 DDX49Q9Y6V7 483 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms