RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 NFIAQ12857 509 aa16.75■□□□□ 0.27
HDAC6-215ENST00000465457 DCAF15Q66K64 600 aa16.75■□□□□ 0.27
HDAC6-215ENST00000465457 ERICH6Q7L0X2 663 aa16.75■□□□□ 0.27
HDAC6-215ENST00000465457 RHPN1Q8TCX5 695 aa16.75■□□□□ 0.27
HDAC6-215ENST00000465457 SUCLG2Q96I99 432 aa16.75■□□□□ 0.27
HDAC6-215ENST00000465457 TMOD2Q9NZR1 351 aa16.75■□□□□ 0.27
HDAC6-215ENST00000465457 TAOK2Q9UL54 1235 aa16.75■□□□□ 0.27
HDAC6-215ENST00000465457 SMARCA5O60264 1052 aaPredicted RBP16.74■□□□□ 0.27
HDAC6-215ENST00000465457 SLURP2P0DP57 97 aa16.74■□□□□ 0.27
HDAC6-215ENST00000465457 BMP8BP34820 402 aa16.74■□□□□ 0.27
HDAC6-215ENST00000465457 MAGEA10P43363 369 aaPredicted RBP16.74■□□□□ 0.27
HDAC6-215ENST00000465457 HDLBPQ00341 1268 aaKnown RBP16.74■□□□□ 0.27
HDAC6-215ENST00000465457 TCP10Q12799 353 aa16.74■□□□□ 0.27
HDAC6-215ENST00000465457 RABL6Q3YEC7 729 aaPredicted RBP16.74■□□□□ 0.27
HDAC6-215ENST00000465457 FBXO33Q7Z6M2 555 aa16.74■□□□□ 0.27
HDAC6-215ENST00000465457 BICC1Q9H694 974 aaKnown RBP16.74■□□□□ 0.27
HDAC6-215ENST00000465457 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.74■□□□□ 0.27
HDAC6-215ENST00000465457 ZNF112Q9UJU3 913 aa16.74■□□□□ 0.27
HDAC6-215ENST00000465457 CDH23Q9H251 3354 aa16.74■□□□□ 0.27
HDAC6-215ENST00000465457 GSPT1P15170 499 aaKnown RBP16.73■□□□□ 0.27
HDAC6-215ENST00000465457 OS9Q13438 667 aaPredicted RBP16.73■□□□□ 0.27
HDAC6-215ENST00000465457 FKBP1CQ5VVH2 108 aa16.73■□□□□ 0.27
HDAC6-215ENST00000465457 GPR153Q6NV75 609 aa16.73■□□□□ 0.27
HDAC6-215ENST00000465457 GPATCH3Q96I76 525 aa16.73■□□□□ 0.27
HDAC6-215ENST00000465457 KAZALD1Q96I82 304 aa16.73■□□□□ 0.27
HDAC6-215ENST00000465457 DAXXQ9UER7 740 aaPredicted RBP16.73■□□□□ 0.27
HDAC6-215ENST00000465457 ATRNL1Q5VV63 1379 aa16.73■□□□□ 0.27
HDAC6-215ENST00000465457 TNPO2O14787 897 aaKnown RBP16.72■□□□□ 0.27
HDAC6-215ENST00000465457 TRIM32Q13049 653 aa16.72■□□□□ 0.27
HDAC6-215ENST00000465457 LRIT3Q3SXY7 679 aa16.72■□□□□ 0.27
HDAC6-215ENST00000465457 NOL9Q5SY16 702 aaKnown RBP16.72■□□□□ 0.27
HDAC6-215ENST00000465457 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.72■□□□□ 0.27
HDAC6-215ENST00000465457 ZFPM1Q8IX07 1006 aa16.72■□□□□ 0.27
HDAC6-215ENST00000465457 CLASRPQ8N2M8 674 aaKnown RBP16.72■□□□□ 0.27
HDAC6-215ENST00000465457 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.72■□□□□ 0.27
HDAC6-215ENST00000465457 LOC285556D6RIA3 1793 aa16.72■□□□□ 0.27
HDAC6-215ENST00000465457 TTC41PQ6P2S7 1318 aa16.71■□□□□ 0.27
HDAC6-215ENST00000465457 FRMPD3Q5JV73 1810 aa16.71■□□□□ 0.27
HDAC6-215ENST00000465457 SEC24BO95487 1268 aa16.71■□□□□ 0.27
HDAC6-215ENST00000465457 G3BP1Q13283 466 aaKnown RBP eCLIP16.71■□□□□ 0.27
HDAC6-215ENST00000465457 IRF5Q13568 498 aa16.71■□□□□ 0.27
HDAC6-215ENST00000465457 BECN1Q14457 450 aa16.71■□□□□ 0.27
HDAC6-215ENST00000465457 DIXDC1Q155Q3 683 aa16.71■□□□□ 0.27
HDAC6-215ENST00000465457 LRRC24Q50LG9 513 aa16.71■□□□□ 0.27
HDAC6-215ENST00000465457 TBC1D9Q6ZT07 1266 aa16.71■□□□□ 0.27
HDAC6-215ENST00000465457 NECAB2Q7Z6G3 386 aa16.71■□□□□ 0.27
HDAC6-215ENST00000465457 CCDC84Q86UT8 332 aaPredicted RBP16.71■□□□□ 0.27
HDAC6-215ENST00000465457 VPS37DQ86XT2 251 aa16.71■□□□□ 0.27
HDAC6-215ENST00000465457 TDHQ8IZJ6 230 aa16.71■□□□□ 0.27
HDAC6-215ENST00000465457 PXYLP1Q8TE99 480 aa16.71■□□□□ 0.27
HDAC6-215ENST00000465457 HOOK2Q96ED9 719 aa16.71■□□□□ 0.27
HDAC6-215ENST00000465457 C22orf23Q9BZE7 217 aa16.71■□□□□ 0.27
HDAC6-215ENST00000465457 ATAD5Q96QE3 1844 aa16.7■□□□□ 0.26
HDAC6-215ENST00000465457 MYH2Q9UKX2 1941 aa16.7■□□□□ 0.26
HDAC6-215ENST00000465457 DNAH12Q6ZR08 3092 aa16.7■□□□□ 0.26
HDAC6-215ENST00000465457 A0A0G2JLL6 359 aaPredicted RBP16.7■□□□□ 0.26
HDAC6-215ENST00000465457 MFAP1P55081 439 aaKnown RBP16.7■□□□□ 0.26
HDAC6-215ENST00000465457 CDC42EP5Q6NZY7 148 aa16.7■□□□□ 0.26
HDAC6-215ENST00000465457 GADL1Q6ZQY3 521 aa16.7■□□□□ 0.26
HDAC6-215ENST00000465457 PRRT2Q7Z6L0 340 aaPredicted RBP16.7■□□□□ 0.26
HDAC6-215ENST00000465457 VGLL2Q8N8G2 317 aa16.7■□□□□ 0.26
HDAC6-215ENST00000465457 OTUD7AQ8TE49 926 aaPredicted RBP16.7■□□□□ 0.26
HDAC6-215ENST00000465457 TBC1D22AQ8WUA7 517 aa16.7■□□□□ 0.26
HDAC6-215ENST00000465457 FAM151AQ8WW52 585 aa16.7■□□□□ 0.26
HDAC6-215ENST00000465457 GUCD1Q96NT3 240 aa16.7■□□□□ 0.26
HDAC6-215ENST00000465457 COPRSQ9NQ92 184 aa16.7■□□□□ 0.26
HDAC6-215ENST00000465457 FAM198AQ9UFP1 575 aa16.7■□□□□ 0.26
HDAC6-215ENST00000465457 DAGLAQ9Y4D2 1042 aa16.7■□□□□ 0.26
HDAC6-215ENST00000465457 TTC28Q96AY4 2481 aa16.69■□□□□ 0.26
HDAC6-215ENST00000465457 FRAT2O75474 233 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-215ENST00000465457 SDSP20132 328 aa16.69■□□□□ 0.26
HDAC6-215ENST00000465457 RBM25P49756 843 aaKnown RBP16.69■□□□□ 0.26
HDAC6-215ENST00000465457 ANKRD13CQ8N6S4 541 aa16.69■□□□□ 0.26
HDAC6-215ENST00000465457 PFASO15067 1338 aa16.69■□□□□ 0.26
HDAC6-215ENST00000465457 COL2A1P02458 1487 aaPredicted RBP16.68■□□□□ 0.26
HDAC6-215ENST00000465457 PHF20L1A8MW92 1017 aa16.68■□□□□ 0.26
HDAC6-215ENST00000465457 ERC2O15083 957 aa16.68■□□□□ 0.26
HDAC6-215ENST00000465457 HHIPL2Q6UWX4 724 aa16.68■□□□□ 0.26
HDAC6-215ENST00000465457 KLHDC4Q8TBB5 520 aa16.68■□□□□ 0.26
HDAC6-215ENST00000465457 ZHX2Q9Y6X8 837 aa16.68■□□□□ 0.26
HDAC6-215ENST00000465457 MAST2Q6P0Q8 1798 aa16.68■□□□□ 0.26
HDAC6-215ENST00000465457 MUC3AQ02505 3323 aa16.67■□□□□ 0.26
HDAC6-215ENST00000465457 CXCL11O14625 94 aa16.67■□□□□ 0.26
HDAC6-215ENST00000465457 REC8O95072 547 aa16.67■□□□□ 0.26
HDAC6-215ENST00000465457 PTPRAP18433 802 aa16.67■□□□□ 0.26
HDAC6-215ENST00000465457 SCYL3Q8IZE3 742 aa16.67■□□□□ 0.26
HDAC6-215ENST00000465457 SMCR8Q8TEV9 937 aaPredicted RBP16.67■□□□□ 0.26
HDAC6-215ENST00000465457 FAM161BQ96MY7 647 aa16.67■□□□□ 0.26
HDAC6-215ENST00000465457 UBE2OQ9C0C9 1292 aaKnown RBP16.67■□□□□ 0.26
HDAC6-215ENST00000465457 MAST3O60307 1309 aa16.67■□□□□ 0.26
HDAC6-215ENST00000465457 MROH5Q6ZUA9 1318 aa16.67■□□□□ 0.26
HDAC6-215ENST00000465457 GLRX3O76003 335 aaKnown RBP16.66■□□□□ 0.26
HDAC6-215ENST00000465457 IFIT2P09913 472 aaKnown RBP16.66■□□□□ 0.26
HDAC6-215ENST00000465457 METTL24Q5JXM2 366 aa16.66■□□□□ 0.26
HDAC6-215ENST00000465457 TREML2Q5T2D2 321 aa16.66■□□□□ 0.26
HDAC6-215ENST00000465457 MRIQ9BWK5 157 aa16.66■□□□□ 0.26
HDAC6-215ENST00000465457 IL1RAPL2Q9NP60 686 aa16.66■□□□□ 0.26
HDAC6-215ENST00000465457 FBXO3Q9UK99 471 aa16.66■□□□□ 0.26
HDAC6-215ENST00000465457 AFG3L2Q9Y4W6 797 aa16.66■□□□□ 0.26
HDAC6-215ENST00000465457 RPTORQ8N122 1335 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms