RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 MAP3K10Q02779 954 aa13.86□□□□□ -0.19
SSR3-202ENST00000463503 METTL24Q5JXM2 366 aa13.86□□□□□ -0.19
SSR3-202ENST00000463503 MAP3K21Q5TCX8 1036 aa13.86□□□□□ -0.19
SSR3-202ENST00000463503 SH3BP5LQ7L8J4 393 aa13.86□□□□□ -0.19
SSR3-202ENST00000463503 TRIB2Q92519 343 aa13.86□□□□□ -0.19
SSR3-202ENST00000463503 GJD2Q9UKL4 321 aa13.86□□□□□ -0.19
SSR3-202ENST00000463503 BDP1A6H8Y1 2624 aa13.86□□□□□ -0.19
SSR3-202ENST00000463503 UTYO14607 1347 aa13.86□□□□□ -0.19
SSR3-202ENST00000463503 NBPF7P0C2Y1 421 aaPredicted RBP13.85□□□□□ -0.19
SSR3-202ENST00000463503 TRIM27P14373 513 aa13.85□□□□□ -0.19
SSR3-202ENST00000463503 PDE3AQ14432 1141 aa13.85□□□□□ -0.19
SSR3-202ENST00000463503 CCDC84Q86UT8 332 aaPredicted RBP13.85□□□□□ -0.19
SSR3-202ENST00000463503 ANKRD44Q8N8A2 993 aa13.85□□□□□ -0.19
SSR3-202ENST00000463503 BICC1Q9H694 974 aaKnown RBP13.85□□□□□ -0.19
SSR3-202ENST00000463503 HMX1Q9NP08 348 aaPredicted RBP13.85□□□□□ -0.19
SSR3-202ENST00000463503 PRDM6Q9NQX0 595 aa13.85□□□□□ -0.19
SSR3-202ENST00000463503 PICK1Q9NRD5 415 aa13.85□□□□□ -0.19
SSR3-202ENST00000463503 C9orf78Q9NZ63 289 aaPredicted RBP13.85□□□□□ -0.19
SSR3-202ENST00000463503 NCOR1O75376 2440 aa13.85□□□□□ -0.19
SSR3-202ENST00000463503 TRIM75PA6NK02 468 aa13.84□□□□□ -0.19
SSR3-202ENST00000463503 ALDH1L1O75891 902 aa13.84□□□□□ -0.19
SSR3-202ENST00000463503 WDR66Q8TBY9 1149 aa13.84□□□□□ -0.19
SSR3-202ENST00000463503 RGS3P49796 1198 aa13.83□□□□□ -0.2
SSR3-202ENST00000463503 RRP1P56182 461 aaKnown RBP13.83□□□□□ -0.2
SSR3-202ENST00000463503 MDM2Q00987 491 aaPredicted RBP13.83□□□□□ -0.2
SSR3-202ENST00000463503 PUM3Q15397 648 aaKnown RBP13.83□□□□□ -0.2
SSR3-202ENST00000463503 LRRC26Q2I0M4 334 aa13.83□□□□□ -0.2
SSR3-202ENST00000463503 KLHDC4Q8TBB5 520 aa13.83□□□□□ -0.2
SSR3-202ENST00000463503 FAM161BQ96MY7 647 aa13.83□□□□□ -0.2
SSR3-202ENST00000463503 IDI2Q9BXS1 227 aa13.83□□□□□ -0.2
SSR3-202ENST00000463503 CHD9Q3L8U1 2897 aa13.82□□□□□ -0.2
SSR3-202ENST00000463503 DDTLA6NHG4 134 aaPredicted RBP13.82□□□□□ -0.2
SSR3-202ENST00000463503 PROCA1Q8NCQ7 364 aaPredicted RBP13.82□□□□□ -0.2
SSR3-202ENST00000463503 FRAT1Q92837 279 aaPredicted RBP13.82□□□□□ -0.2
SSR3-202ENST00000463503 SRCIN1Q9C0H9 1055 aa13.82□□□□□ -0.2
SSR3-202ENST00000463503 USP40Q9NVE5 1235 aa13.82□□□□□ -0.2
SSR3-202ENST00000463503 PNMA3Q9UL41 463 aa13.82□□□□□ -0.2
SSR3-202ENST00000463503 GAKO14976 1311 aa13.82□□□□□ -0.2
SSR3-202ENST00000463503 SALL1Q9NSC2 1324 aa13.82□□□□□ -0.2
SSR3-202ENST00000463503 CTNND1O60716 968 aaKnown RBP13.81□□□□□ -0.2
SSR3-202ENST00000463503 ENTPD3O75355 529 aa13.81□□□□□ -0.2
SSR3-202ENST00000463503 PRKAR2AP13861 404 aaKnown RBP13.81□□□□□ -0.2
SSR3-202ENST00000463503 DDX4Q9NQI0 724 aaKnown RBP13.81□□□□□ -0.2
SSR3-202ENST00000463503 XIRP2A4UGR9 3374 aa13.8□□□□□ -0.2
SSR3-202ENST00000463503 MYO5AQ9Y4I1 1855 aaKnown RBP13.8□□□□□ -0.2
SSR3-202ENST00000463503 IFIT1P09914 478 aaKnown RBP13.8□□□□□ -0.2
SSR3-202ENST00000463503 GCLCP48506 637 aaPredicted RBP13.8□□□□□ -0.2
SSR3-202ENST00000463503 LHX8Q68G74 356 aa13.8□□□□□ -0.2
SSR3-202ENST00000463503 ZNF236Q9UL36 1845 aa13.79□□□□□ -0.2
SSR3-202ENST00000463503 LDHBP07195 334 aaKnown RBP13.79□□□□□ -0.2
SSR3-202ENST00000463503 ZNF697Q5TEC3 545 aa13.79□□□□□ -0.2
SSR3-202ENST00000463503 SLC4A10Q6U841 1118 aa13.79□□□□□ -0.2
SSR3-202ENST00000463503 MAFAQ8NHW3 353 aaPredicted RBP13.79□□□□□ -0.2
SSR3-202ENST00000463503 CDX2Q99626 313 aaPredicted RBP13.79□□□□□ -0.2
SSR3-202ENST00000463503 ASCC2Q9H1I8 757 aaPredicted RBP13.79□□□□□ -0.2
SSR3-202ENST00000463503 MORF4L1Q9UBU8 362 aa13.79□□□□□ -0.2
SSR3-202ENST00000463503 SUPT16HQ9Y5B9 1047 aaKnown RBP13.79□□□□□ -0.2
SSR3-202ENST00000463503 LRRFIP2Q9Y608 721 aaKnown RBP13.79□□□□□ -0.2
SSR3-202ENST00000463503 CHD7Q9P2D1 2997 aa13.78□□□□□ -0.2
SSR3-202ENST00000463503 FAM196BA6NMK8 535 aa13.78□□□□□ -0.2
SSR3-202ENST00000463503 RFX5P48382 616 aaPredicted RBP13.78□□□□□ -0.2
SSR3-202ENST00000463503 FTSJ3Q8IY81 847 aaKnown RBP13.78□□□□□ -0.2
SSR3-202ENST00000463503 LPIN2Q92539 896 aa13.78□□□□□ -0.2
SSR3-202ENST00000463503 PEX10O60683 326 aa13.77□□□□□ -0.21
SSR3-202ENST00000463503 RLBP1P12271 317 aa13.77□□□□□ -0.21
SSR3-202ENST00000463503 XRCC5P13010 732 aaKnown RBP13.77□□□□□ -0.21
SSR3-202ENST00000463503 SLC5A1P13866 664 aa13.77□□□□□ -0.21
SSR3-202ENST00000463503 CYP2B6P20813 491 aa13.77□□□□□ -0.21
SSR3-202ENST00000463503 CCND3P30281 292 aaPredicted RBP13.77□□□□□ -0.21
SSR3-202ENST00000463503 HMGCS2P54868 508 aa13.77□□□□□ -0.21
SSR3-202ENST00000463503 CACNB2Q08289 660 aaPredicted RBP13.77□□□□□ -0.21
SSR3-202ENST00000463503 ZSCAN29Q8IWY8 852 aaPredicted RBP13.77□□□□□ -0.21
SSR3-202ENST00000463503 USP6NLQ92738 828 aa13.77□□□□□ -0.21
SSR3-202ENST00000463503 TNNQ9UQP3 1299 aa13.77□□□□□ -0.21
SSR3-202ENST00000463503 A0A0G2JMZ2 1700 aa13.76□□□□□ -0.21
SSR3-202ENST00000463503 ZBTB22O15209 634 aa13.76□□□□□ -0.21
SSR3-202ENST00000463503 TBC1D12O60347 775 aa13.76□□□□□ -0.21
SSR3-202ENST00000463503 SPP2Q13103 211 aa13.76□□□□□ -0.21
SSR3-202ENST00000463503 RRP1BQ14684 758 aaKnown RBP13.76□□□□□ -0.21
SSR3-202ENST00000463503 MVPQ14764 893 aaKnown RBP13.76□□□□□ -0.21
SSR3-202ENST00000463503 ATG9AQ7Z3C6 839 aa13.76□□□□□ -0.21
SSR3-202ENST00000463503 TMEM57Q8N5G2 664 aa13.76□□□□□ -0.21
SSR3-202ENST00000463503 ZNF280CQ8ND82 737 aa13.76□□□□□ -0.21
SSR3-202ENST00000463503 SOCS4Q8WXH5 440 aa13.76□□□□□ -0.21
SSR3-202ENST00000463503 TTYH1Q9H313 450 aaPredicted RBP13.76□□□□□ -0.21
SSR3-202ENST00000463503 CHMP4BQ9H444 224 aaKnown RBP13.76□□□□□ -0.21
SSR3-202ENST00000463503 TXNRD2Q9NNW7 524 aa13.76□□□□□ -0.21
SSR3-202ENST00000463503 GBF1Q92538 1859 aa13.76□□□□□ -0.21
SSR3-202ENST00000463503 MYH1P12882 1939 aa13.75□□□□□ -0.21
SSR3-202ENST00000463503 EYA2O00167 538 aa13.75□□□□□ -0.21
SSR3-202ENST00000463503 PICALMQ13492 652 aa13.75□□□□□ -0.21
SSR3-202ENST00000463503 AAMPQ13685 434 aa13.75□□□□□ -0.21
SSR3-202ENST00000463503 CCL14Q16627 93 aa13.75□□□□□ -0.21
SSR3-202ENST00000463503 SH3D19Q5HYK7 790 aa13.75□□□□□ -0.21
SSR3-202ENST00000463503 CLUAP1Q96AJ1 413 aa13.75□□□□□ -0.21
SSR3-202ENST00000463503 USP44Q9H0E7 712 aa13.75□□□□□ -0.21
SSR3-202ENST00000463503 OSBPL5Q9H0X9 879 aaPredicted RBP13.75□□□□□ -0.21
SSR3-202ENST00000463503 DDX19BQ9UMR2 479 aa13.75□□□□□ -0.21
SSR3-202ENST00000463503 HDAC5Q9UQL6 1122 aa13.75□□□□□ -0.21
SSR3-202ENST00000463503 PARP14Q460N5 1801 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms