RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.47□□□□□ -0.57
PKP4-208ENST00000462335 SDR42E1Q8WUS8 393 aa11.47□□□□□ -0.57
PKP4-208ENST00000462335 CABP5Q9NP86 173 aa11.47□□□□□ -0.57
PKP4-208ENST00000462335 SERPINB13Q9UIV8 391 aa11.47□□□□□ -0.57
PKP4-208ENST00000462335 MINDY4BA8MYZ0 360 aa11.46□□□□□ -0.57
PKP4-208ENST00000462335 FAM155AB1AL88 458 aaPredicted RBP11.46□□□□□ -0.57
PKP4-208ENST00000462335 MPHOSPH10O00566 681 aaKnown RBP11.46□□□□□ -0.57
PKP4-208ENST00000462335 TRPA1O75762 1119 aa11.46□□□□□ -0.57
PKP4-208ENST00000462335 ALDH1A1P00352 501 aa11.46□□□□□ -0.57
PKP4-208ENST00000462335 CETPP11597 493 aa11.46□□□□□ -0.57
PKP4-208ENST00000462335 INPP5BP32019 993 aa11.46□□□□□ -0.57
PKP4-208ENST00000462335 SNAPC2Q13487 334 aa11.46□□□□□ -0.57
PKP4-208ENST00000462335 SLFNL1Q499Z3 407 aa11.46□□□□□ -0.57
PKP4-208ENST00000462335 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.46□□□□□ -0.57
PKP4-208ENST00000462335 SH3BP5LQ7L8J4 393 aa11.46□□□□□ -0.57
PKP4-208ENST00000462335 TICAM2Q86XR7 235 aa11.46□□□□□ -0.57
PKP4-208ENST00000462335 SCYL3Q8IZE3 742 aa11.46□□□□□ -0.57
PKP4-208ENST00000462335 RIOK1Q9BRS2 568 aaKnown RBP11.46□□□□□ -0.57
PKP4-208ENST00000462335 PUS7LQ9H0K6 701 aaKnown RBP11.46□□□□□ -0.57
PKP4-208ENST00000462335 AS3MTQ9HBK9 375 aa11.46□□□□□ -0.57
PKP4-208ENST00000462335 ZNF287Q9HBT7 754 aa11.46□□□□□ -0.57
PKP4-208ENST00000462335 MYH7P12883 1935 aa11.45□□□□□ -0.58
PKP4-208ENST00000462335 FAM196BA6NMK8 535 aa11.45□□□□□ -0.58
PKP4-208ENST00000462335 GPAA1O43292 621 aa11.45□□□□□ -0.58
PKP4-208ENST00000462335 PPATQ06203 517 aa11.45□□□□□ -0.58
PKP4-208ENST00000462335 CERKLQ49MI3 558 aaPredicted RBP11.45□□□□□ -0.58
PKP4-208ENST00000462335 STRBPQ96SI9 672 aaKnown RBP11.45□□□□□ -0.58
PKP4-208ENST00000462335 OSBPL3Q9H4L5 887 aa11.45□□□□□ -0.58
PKP4-208ENST00000462335 MKNK2Q9HBH9 465 aa11.45□□□□□ -0.58
PKP4-208ENST00000462335 HELLSQ9NRZ9 838 aa11.45□□□□□ -0.58
PKP4-208ENST00000462335 WBP1LQ9NX94 342 aa11.45□□□□□ -0.58
PKP4-208ENST00000462335 ZNF112Q9UJU3 913 aa11.45□□□□□ -0.58
PKP4-208ENST00000462335 ZHX2Q9Y6X8 837 aa11.45□□□□□ -0.58
PKP4-208ENST00000462335 DOCK2Q92608 1830 aa11.44□□□□□ -0.58
PKP4-208ENST00000462335 ATRNL1Q5VV63 1379 aa11.44□□□□□ -0.58
PKP4-208ENST00000462335 CCL15-CCL14A0A0B4J2E2 113 aa11.44□□□□□ -0.58
PKP4-208ENST00000462335 SPDYE5A6NIY4 337 aa11.44□□□□□ -0.58
PKP4-208ENST00000462335 PATL2C9JE40 543 aaKnown RBP11.44□□□□□ -0.58
PKP4-208ENST00000462335 USP17L12C9JPN9 530 aa11.44□□□□□ -0.58
PKP4-208ENST00000462335 USP17L21D6R901 530 aa11.44□□□□□ -0.58
PKP4-208ENST00000462335 PRKAB2O43741 272 aa11.44□□□□□ -0.58
PKP4-208ENST00000462335 ASNSP08243 561 aa11.44□□□□□ -0.58
PKP4-208ENST00000462335 PPIL2Q13356 520 aa11.44□□□□□ -0.58
PKP4-208ENST00000462335 CCL15Q16663 113 aa11.44□□□□□ -0.58
PKP4-208ENST00000462335 MCMDC2Q4G0Z9 681 aa11.44□□□□□ -0.58
PKP4-208ENST00000462335 ERICH6BQ5W0A0 696 aa11.44□□□□□ -0.58
PKP4-208ENST00000462335 GIMAP6Q6P9H5 292 aa11.44□□□□□ -0.58
PKP4-208ENST00000462335 RUFY2Q8WXA3 655 aa11.44□□□□□ -0.58
PKP4-208ENST00000462335 OSBP2Q969R2 916 aa11.44□□□□□ -0.58
PKP4-208ENST00000462335 TBC1D2Q9BYX2 928 aa11.44□□□□□ -0.58
PKP4-208ENST00000462335 NAPBQ9H115 298 aa11.44□□□□□ -0.58
PKP4-208ENST00000462335 DCP1AQ9NPI6 582 aaPredicted RBP11.44□□□□□ -0.58
PKP4-208ENST00000462335 ARPP21Q9UBL0 812 aaPredicted RBP11.44□□□□□ -0.58
PKP4-208ENST00000462335 SWAP70Q9UH65 585 aa11.44□□□□□ -0.58
PKP4-208ENST00000462335 MYH1P12882 1939 aa11.44□□□□□ -0.58
PKP4-208ENST00000462335 CEP350Q5VT06 3117 aa11.44□□□□□ -0.58
PKP4-208ENST00000462335 SALL3Q9BXA9 1300 aa11.43□□□□□ -0.58
PKP4-208ENST00000462335 SSC5DA1L4H1 1573 aa11.43□□□□□ -0.58
PKP4-208ENST00000462335 USP17L5A8MUK1 530 aa11.43□□□□□ -0.58
PKP4-208ENST00000462335 PHF20L1A8MW92 1017 aa11.43□□□□□ -0.58
PKP4-208ENST00000462335 SDSP20132 328 aa11.43□□□□□ -0.58
PKP4-208ENST00000462335 CAP2P40123 477 aa11.43□□□□□ -0.58
PKP4-208ENST00000462335 TM4SF4P48230 202 aa11.43□□□□□ -0.58
PKP4-208ENST00000462335 RAB3GAP1Q15042 981 aa11.43□□□□□ -0.58
PKP4-208ENST00000462335 ABCB5Q2M3G0 1257 aa11.43□□□□□ -0.58
PKP4-208ENST00000462335 ZMYM1Q5SVZ6 1142 aa11.43□□□□□ -0.58
PKP4-208ENST00000462335 NOL9Q5SY16 702 aaKnown RBP11.43□□□□□ -0.58
PKP4-208ENST00000462335 GADL1Q6ZQY3 521 aa11.43□□□□□ -0.58
PKP4-208ENST00000462335 FASTKD5Q7L8L6 764 aaKnown RBP11.43□□□□□ -0.58
PKP4-208ENST00000462335 STK11IPQ8N1F8 1099 aa11.43□□□□□ -0.58
PKP4-208ENST00000462335 ZIC5Q96T25 663 aa11.43□□□□□ -0.58
PKP4-208ENST00000462335 FEZ1Q99689 392 aa11.43□□□□□ -0.58
PKP4-208ENST00000462335 EHD4Q9H223 541 aa11.43□□□□□ -0.58
PKP4-208ENST00000462335 GINM1Q9NU53 330 aa11.43□□□□□ -0.58
PKP4-208ENST00000462335 PPP4R2Q9NY27 417 aa11.43□□□□□ -0.58
PKP4-208ENST00000462335 TMOD4Q9NZQ9 345 aa11.43□□□□□ -0.58
PKP4-208ENST00000462335 SNCAIPQ9Y6H5 919 aa11.43□□□□□ -0.58
PKP4-208ENST00000462335 COL2A1P02458 1487 aaPredicted RBP11.43□□□□□ -0.58
PKP4-208ENST00000462335 TRIM75PA6NK02 468 aa11.42□□□□□ -0.58
PKP4-208ENST00000462335 M0R2C6 588 aa11.42□□□□□ -0.58
PKP4-208ENST00000462335 CXCL11O14625 94 aa11.42□□□□□ -0.58
PKP4-208ENST00000462335 IRF6O14896 467 aa11.42□□□□□ -0.58
PKP4-208ENST00000462335 GDF11O95390 407 aa11.42□□□□□ -0.58
PKP4-208ENST00000462335 CHGBP05060 677 aa11.42□□□□□ -0.58
PKP4-208ENST00000462335 PTPRAP18433 802 aa11.42□□□□□ -0.58
PKP4-208ENST00000462335 PLCD1P51178 756 aa11.42□□□□□ -0.58
PKP4-208ENST00000462335 MAP3K10Q02779 954 aa11.42□□□□□ -0.58
PKP4-208ENST00000462335 TTC22Q5TAA0 569 aa11.42□□□□□ -0.58
PKP4-208ENST00000462335 CASC1Q6TDU7 716 aa11.42□□□□□ -0.58
PKP4-208ENST00000462335 CWC27Q6UX04 472 aaKnown RBP11.42□□□□□ -0.58
PKP4-208ENST00000462335 IFNL1Q8IU54 200 aa11.42□□□□□ -0.58
PKP4-208ENST00000462335 ZNF444Q8N0Y2 327 aaPredicted RBP11.42□□□□□ -0.58
PKP4-208ENST00000462335 CNKSR2Q8WXI2 1034 aa11.42□□□□□ -0.58
PKP4-208ENST00000462335 ZFYVE28Q9HCC9 887 aa11.42□□□□□ -0.58
PKP4-208ENST00000462335 RNF186Q9NXI6 227 aa11.42□□□□□ -0.58
PKP4-208ENST00000462335 SAGE1Q9NXZ1 904 aa11.42□□□□□ -0.58
PKP4-208ENST00000462335 TSKSQ9UJT2 592 aa11.42□□□□□ -0.58
PKP4-208ENST00000462335 TAOK2Q9UL54 1235 aa11.42□□□□□ -0.58
PKP4-208ENST00000462335 RFX7Q2KHR2 1363 aa11.41□□□□□ -0.58
PKP4-208ENST00000462335 FOXN1O15353 648 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms