RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 COL9A3Q14050 684 aaPredicted RBP16.37■□□□□ 0.21
NCL-207ENST00000461347 KAZALD1Q96I82 304 aa16.37■□□□□ 0.21
NCL-207ENST00000461347 NAPGQ99747 312 aaPredicted RBP16.37■□□□□ 0.21
NCL-207ENST00000461347 EPC1Q9H2F5 836 aa16.37■□□□□ 0.21
NCL-207ENST00000461347 LUC7LQ9NQ29 371 aaKnown RBP16.37■□□□□ 0.21
NCL-207ENST00000461347 RMND1Q9NWS8 449 aa16.37■□□□□ 0.21
NCL-207ENST00000461347 LUC7L2Q9Y383 392 aaKnown RBP16.37■□□□□ 0.21
NCL-207ENST00000461347 ERBB3P21860 1342 aa16.37■□□□□ 0.21
NCL-207ENST00000461347 A0A0G2JLW4 131 aa16.36■□□□□ 0.21
NCL-207ENST00000461347 TMEM232C9JQI7 657 aa16.36■□□□□ 0.21
NCL-207ENST00000461347 AKR1B10O60218 316 aa16.36■□□□□ 0.21
NCL-207ENST00000461347 PDE6AP16499 860 aa16.36■□□□□ 0.21
NCL-207ENST00000461347 USP5P45974 858 aa16.36■□□□□ 0.21
NCL-207ENST00000461347 ATP2B2Q01814 1243 aa16.36■□□□□ 0.21
NCL-207ENST00000461347 TCIRG1Q13488 830 aa16.36■□□□□ 0.21
NCL-207ENST00000461347 CCDC178Q5BJE1 867 aa16.36■□□□□ 0.21
NCL-207ENST00000461347 USPL1Q5W0Q7 1092 aa16.36■□□□□ 0.21
NCL-207ENST00000461347 E4F1Q66K89 784 aaPredicted RBP16.36■□□□□ 0.21
NCL-207ENST00000461347 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.36■□□□□ 0.21
NCL-207ENST00000461347 IL2RBP14784 551 aa16.36■□□□□ 0.21
NCL-207ENST00000461347 CYLC1P35663 651 aaPredicted RBP16.36■□□□□ 0.21
NCL-207ENST00000461347 GPR108Q9NPR9 543 aa16.36■□□□□ 0.21
NCL-207ENST00000461347 STX10O60499 249 aa16.36■□□□□ 0.21
NCL-207ENST00000461347 ZSCAN26Q16670 478 aa16.36■□□□□ 0.21
NCL-207ENST00000461347 CCDC122Q5T0U0 273 aa16.36■□□□□ 0.21
NCL-207ENST00000461347 KCNB2Q92953 911 aa16.36■□□□□ 0.21
NCL-207ENST00000461347 TCP11L1Q9NUJ3 509 aa16.36■□□□□ 0.21
NCL-207ENST00000461347 PSMA7O14818 248 aa16.36■□□□□ 0.21
NCL-207ENST00000461347 CCDC96Q2M329 555 aa16.36■□□□□ 0.21
NCL-207ENST00000461347 BLZF1Q9H2G9 400 aa16.36■□□□□ 0.21
NCL-207ENST00000461347 MORC2Q9Y6X9 1032 aaPredicted RBP16.36■□□□□ 0.21
NCL-207ENST00000461347 SHTN1A0MZ66 631 aa16.35■□□□□ 0.21
NCL-207ENST00000461347 COBLO75128 1261 aa16.35■□□□□ 0.21
NCL-207ENST00000461347 IVLP07476 585 aa16.35■□□□□ 0.21
NCL-207ENST00000461347 AKNAD1Q5T1N1 836 aa16.35■□□□□ 0.21
NCL-207ENST00000461347 CEP89Q96ST8 783 aa16.35■□□□□ 0.21
NCL-207ENST00000461347 PHLPP2Q6ZVD8 1323 aa16.35■□□□□ 0.21
NCL-207ENST00000461347 GOLGA6L10A6NI86 522 aa16.35■□□□□ 0.21
NCL-207ENST00000461347 CADPS2Q86UW7 1296 aa16.35■□□□□ 0.21
NCL-207ENST00000461347 VSTM4Q8IW00 320 aa16.35■□□□□ 0.21
NCL-207ENST00000461347 GDAP1L1Q96MZ0 367 aa16.35■□□□□ 0.21
NCL-207ENST00000461347 STX8Q9UNK0 236 aa16.35■□□□□ 0.21
NCL-207ENST00000461347 PCDH11XQ9BZA7 1347 aa16.35■□□□□ 0.21
NCL-207ENST00000461347 PCDH11YQ9BZA8 1340 aa16.35■□□□□ 0.21
NCL-207ENST00000461347 DZIP3Q86Y13 1208 aaKnown RBP16.35■□□□□ 0.21
NCL-207ENST00000461347 PYM1Q9BRP8 204 aaKnown RBP16.35■□□□□ 0.21
NCL-207ENST00000461347 MAGEB6P1A0A0J9YX57 407 aa16.34■□□□□ 0.21
NCL-207ENST00000461347 GNAT2P19087 354 aa16.34■□□□□ 0.21
NCL-207ENST00000461347 KIF5BP33176 963 aa16.34■□□□□ 0.21
NCL-207ENST00000461347 VAT1LQ9HCJ6 419 aa16.34■□□□□ 0.21
NCL-207ENST00000461347 SAMSN1Q9NSI8 373 aaKnown RBP16.34■□□□□ 0.21
NCL-207ENST00000461347 TTF2Q9UNY4 1162 aaKnown RBP16.34■□□□□ 0.21
NCL-207ENST00000461347 PATL2C9JE40 543 aaKnown RBP16.34■□□□□ 0.21
NCL-207ENST00000461347 KRT86O43790 486 aa16.34■□□□□ 0.21
NCL-207ENST00000461347 PPP6R2O75170 966 aa16.34■□□□□ 0.21
NCL-207ENST00000461347 CTDNEP1O95476 244 aa16.34■□□□□ 0.21
NCL-207ENST00000461347 PHKA1P46020 1223 aa16.34■□□□□ 0.21
NCL-207ENST00000461347 NR5A1Q13285 461 aa16.34■□□□□ 0.21
NCL-207ENST00000461347 DZIP1Q86YF9 867 aaKnown RBP16.34■□□□□ 0.21
NCL-207ENST00000461347 KAT14Q9H8E8 782 aa16.34■□□□□ 0.21
NCL-207ENST00000461347 TCHHQ07283 1943 aa16.34■□□□□ 0.21
NCL-207ENST00000461347 ZBTB22O15209 634 aa16.34■□□□□ 0.21
NCL-207ENST00000461347 EHBP1Q8NDI1 1231 aa16.34■□□□□ 0.21
NCL-207ENST00000461347 RASSF4Q9H2L5 321 aa16.34■□□□□ 0.21
NCL-207ENST00000461347 CKAP4Q07065 602 aaKnown RBP16.33■□□□□ 0.21
NCL-207ENST00000461347 PUM3Q15397 648 aaKnown RBP16.33■□□□□ 0.21
NCL-207ENST00000461347 DNAJC21Q5F1R6 531 aaKnown RBP16.33■□□□□ 0.21
NCL-207ENST00000461347 PIK3AP1Q6ZUJ8 805 aa16.33■□□□□ 0.21
NCL-207ENST00000461347 IFNL3Q8IZI9 196 aa16.33■□□□□ 0.21
NCL-207ENST00000461347 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.33■□□□□ 0.21
NCL-207ENST00000461347 PRDM4Q9UKN5 801 aa16.33■□□□□ 0.21
NCL-207ENST00000461347 MYO1BO43795 1136 aa16.33■□□□□ 0.2
NCL-207ENST00000461347 GPIHBP1Q8IV16 184 aa16.33■□□□□ 0.2
NCL-207ENST00000461347 SMYD4Q8IYR2 804 aaPredicted RBP16.33■□□□□ 0.2
NCL-207ENST00000461347 ZNF654Q8IZM8 581 aa16.33■□□□□ 0.2
NCL-207ENST00000461347 DPF2Q92785 391 aa16.33■□□□□ 0.2
NCL-207ENST00000461347 EXOSC10Q01780 885 aaKnown RBP16.33■□□□□ 0.2
NCL-207ENST00000461347 CCDC152Q4G0S7 254 aa16.33■□□□□ 0.2
NCL-207ENST00000461347 ODF2Q5BJF6 829 aa16.33■□□□□ 0.2
NCL-207ENST00000461347 MACROD2A1Z1Q3 448 aa16.32■□□□□ 0.2
NCL-207ENST00000461347 KIF28PB7ZC32 967 aa16.32■□□□□ 0.2
NCL-207ENST00000461347 ASIC1P78348 528 aa16.32■□□□□ 0.2
NCL-207ENST00000461347 KIF5AQ12840 1032 aa16.32■□□□□ 0.2
NCL-207ENST00000461347 TMTC1Q8IUR5 882 aa16.32■□□□□ 0.2
NCL-207ENST00000461347 CDC5LQ99459 802 aaKnown RBP16.32■□□□□ 0.2
NCL-207ENST00000461347 ZCCHC17Q9NP64 241 aaKnown RBP16.32■□□□□ 0.2
NCL-207ENST00000461347 RTL9Q8NET4 1388 aa16.32■□□□□ 0.2
NCL-207ENST00000461347 CEMIPQ8WUJ3 1361 aa16.32■□□□□ 0.2
NCL-207ENST00000461347 CDR1P51861 262 aa16.32■□□□□ 0.2
NCL-207ENST00000461347 TTC38Q5R3I4 469 aa16.32■□□□□ 0.2
NCL-207ENST00000461347 SAMD1Q6SPF0 538 aaPredicted RBP16.32■□□□□ 0.2
NCL-207ENST00000461347 NBPF11Q86T75 865 aa16.32■□□□□ 0.2
NCL-207ENST00000461347 ZNF444Q8N0Y2 327 aaPredicted RBP16.32■□□□□ 0.2
NCL-207ENST00000461347 SPATA5Q8NB90 893 aa16.32■□□□□ 0.2
NCL-207ENST00000461347 RABGGTAQ92696 567 aa16.32■□□□□ 0.2
NCL-207ENST00000461347 GREM2Q9H772 168 aa16.32■□□□□ 0.2
NCL-207ENST00000461347 EXOC1Q9NV70 894 aa16.32■□□□□ 0.2
NCL-207ENST00000461347 MAN1B1Q9UKM7 699 aa16.32■□□□□ 0.2
NCL-207ENST00000461347 SLIT1O75093 1534 aa16.32■□□□□ 0.2
NCL-207ENST00000461347 H7C1W4 665 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms