RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 CAP1Q01518 475 aa18.07■□□□□ 0.48
ATG4B-213ENST00000460211 MAP3K10Q02779 954 aa18.07■□□□□ 0.48
ATG4B-213ENST00000460211 HABP4Q5JVS0 413 aaKnown RBP18.07■□□□□ 0.48
ATG4B-213ENST00000460211 MAPKAPK5Q8IW41 473 aa18.07■□□□□ 0.48
ATG4B-213ENST00000460211 EDC3Q96F86 508 aaKnown RBP18.07■□□□□ 0.48
ATG4B-213ENST00000460211 TRIM34Q9BYJ4 488 aa18.07■□□□□ 0.48
ATG4B-213ENST00000460211 EFCC1Q9HA90 598 aa18.07■□□□□ 0.48
ATG4B-213ENST00000460211 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.07■□□□□ 0.48
ATG4B-213ENST00000460211 PICK1Q9NRD5 415 aa18.07■□□□□ 0.48
ATG4B-213ENST00000460211 SNCAIPQ9Y6H5 919 aa18.07■□□□□ 0.48
ATG4B-213ENST00000460211 RBBP6Q7Z6E9 1792 aaKnown RBP18.07■□□□□ 0.48
ATG4B-213ENST00000460211 ZNF532Q9HCE3 1301 aa18.06■□□□□ 0.48
ATG4B-213ENST00000460211 HLA-DOAP06340 250 aa18.06■□□□□ 0.48
ATG4B-213ENST00000460211 EN2P19622 333 aaPredicted RBP18.06■□□□□ 0.48
ATG4B-213ENST00000460211 SP3Q02447 781 aa18.06■□□□□ 0.48
ATG4B-213ENST00000460211 PPATQ06203 517 aa18.06■□□□□ 0.48
ATG4B-213ENST00000460211 NOL9Q5SY16 702 aaKnown RBP18.06■□□□□ 0.48
ATG4B-213ENST00000460211 HERC5Q9UII4 1024 aaKnown RBP18.06■□□□□ 0.48
ATG4B-213ENST00000460211 COL2A1P02458 1487 aaPredicted RBP18.06■□□□□ 0.48
ATG4B-213ENST00000460211 FLT1P17948 1338 aa18.05■□□□□ 0.48
ATG4B-213ENST00000460211 MAST2Q6P0Q8 1798 aa18.05■□□□□ 0.48
ATG4B-213ENST00000460211 CTNND1O60716 968 aaKnown RBP18.05■□□□□ 0.48
ATG4B-213ENST00000460211 PPIL2Q13356 520 aa18.05■□□□□ 0.48
ATG4B-213ENST00000460211 LRRFIP1Q32MZ4 808 aaKnown RBP18.05■□□□□ 0.48
ATG4B-213ENST00000460211 FOXP4Q8IVH2 680 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-213ENST00000460211 CNKSR2Q8WXI2 1034 aa18.05■□□□□ 0.48
ATG4B-213ENST00000460211 CRNKL1Q9BZJ0 848 aaKnown RBP18.05■□□□□ 0.48
ATG4B-213ENST00000460211 PHF20L1A8MW92 1017 aa18.04■□□□□ 0.48
ATG4B-213ENST00000460211 GLRX3O76003 335 aaKnown RBP18.04■□□□□ 0.48
ATG4B-213ENST00000460211 CETPP11597 493 aa18.04■□□□□ 0.48
ATG4B-213ENST00000460211 ADD2P35612 726 aa18.04■□□□□ 0.48
ATG4B-213ENST00000460211 SNAPC2Q13487 334 aa18.04■□□□□ 0.48
ATG4B-213ENST00000460211 UBE3CQ15386 1083 aa18.04■□□□□ 0.48
ATG4B-213ENST00000460211 SCYL3Q8IZE3 742 aa18.04■□□□□ 0.48
ATG4B-213ENST00000460211 CRACR2BQ8N4Y2 399 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-213ENST00000460211 BRCA2P51587 3418 aa18.04■□□□□ 0.48
ATG4B-213ENST00000460211 KIAA0100Q14667 2235 aaKnown RBP18.04■□□□□ 0.48
ATG4B-213ENST00000460211 CCL15-CCL14A0A0B4J2E2 113 aa18.03■□□□□ 0.48
ATG4B-213ENST00000460211 TESPA1A2RU30 521 aaPredicted RBP18.03■□□□□ 0.48
ATG4B-213ENST00000460211 MX1P20591 662 aa18.03■□□□□ 0.48
ATG4B-213ENST00000460211 CCL15Q16663 113 aa18.03■□□□□ 0.48
ATG4B-213ENST00000460211 TSHZ3Q63HK5 1081 aa18.03■□□□□ 0.48
ATG4B-213ENST00000460211 TTC6Q86TZ1 520 aa18.03■□□□□ 0.48
ATG4B-213ENST00000460211 ARMC5Q96C12 935 aa18.03■□□□□ 0.48
ATG4B-213ENST00000460211 MS4A4AQ96JQ5 239 aa18.03■□□□□ 0.48
ATG4B-213ENST00000460211 RIOK1Q9BRS2 568 aaKnown RBP18.03■□□□□ 0.48
ATG4B-213ENST00000460211 SAP30BPQ9UHR5 308 aaKnown RBP18.03■□□□□ 0.48
ATG4B-213ENST00000460211 PALD1Q9ULE6 856 aa18.03■□□□□ 0.48
ATG4B-213ENST00000460211 TCRBV5S4A2TA0A5A2 114 aa18.02■□□□□ 0.48
ATG4B-213ENST00000460211 IRF6O14896 467 aa18.02■□□□□ 0.48
ATG4B-213ENST00000460211 MYCP01106 439 aaPredicted RBP18.02■□□□□ 0.48
ATG4B-213ENST00000460211 KBTBD3Q8NAB2 608 aa18.02■□□□□ 0.48
ATG4B-213ENST00000460211 ZFYP08048 801 aaPredicted RBP18.01■□□□□ 0.47
ATG4B-213ENST00000460211 TAF1CQ15572 869 aaPredicted RBP18.01■□□□□ 0.47
ATG4B-213ENST00000460211 SMC5Q8IY18 1101 aa18.01■□□□□ 0.47
ATG4B-213ENST00000460211 BRI3BPQ8WY22 251 aa18.01■□□□□ 0.47
ATG4B-213ENST00000460211 DDRGK1Q96HY6 314 aa18.01■□□□□ 0.47
ATG4B-213ENST00000460211 TMEM106CQ9BVX2 250 aa18.01■□□□□ 0.47
ATG4B-213ENST00000460211 CXCL11O14625 94 aa18■□□□□ 0.47
ATG4B-213ENST00000460211 POLR3DP05423 398 aaPredicted RBP18■□□□□ 0.47
ATG4B-213ENST00000460211 PTPRAP18433 802 aa18■□□□□ 0.47
ATG4B-213ENST00000460211 B4GALNT3Q6L9W6 998 aa18■□□□□ 0.47
ATG4B-213ENST00000460211 KCNH4Q9UQ05 1017 aa18■□□□□ 0.47
ATG4B-213ENST00000460211 PTCH2Q9Y6C5 1203 aa18■□□□□ 0.47
ATG4B-213ENST00000460211 ZHX2Q9Y6X8 837 aa18■□□□□ 0.47
ATG4B-213ENST00000460211 MYO5AQ9Y4I1 1855 aaKnown RBP18■□□□□ 0.47
ATG4B-213ENST00000460211 ZSWIM8A7E2V4 1837 aa18■□□□□ 0.47
ATG4B-213ENST00000460211 FAM196BA6NMK8 535 aa17.99■□□□□ 0.47
ATG4B-213ENST00000460211 MBD4O95243 580 aa17.99■□□□□ 0.47
ATG4B-213ENST00000460211 IGHDP01880 384 aa17.99■□□□□ 0.47
ATG4B-213ENST00000460211 IRX6P78412 446 aaPredicted RBP17.99■□□□□ 0.47
ATG4B-213ENST00000460211 SLC9C1Q4G0N8 1177 aa17.99■□□□□ 0.47
ATG4B-213ENST00000460211 METTL16Q86W50 562 aaKnown RBP17.99■□□□□ 0.47
ATG4B-213ENST00000460211 PI4K2BQ8TCG2 481 aa17.99■□□□□ 0.47
ATG4B-213ENST00000460211 OTUD7AQ8TE49 926 aaPredicted RBP17.99■□□□□ 0.47
ATG4B-213ENST00000460211 ZNF333Q96JL9 665 aa17.99■□□□□ 0.47
ATG4B-213ENST00000460211 TBC1D2Q9BYX2 928 aa17.99■□□□□ 0.47
ATG4B-213ENST00000460211 LNPKQ9C0E8 428 aa17.99■□□□□ 0.47
ATG4B-213ENST00000460211 ARMT1Q9H993 441 aa17.99■□□□□ 0.47
ATG4B-213ENST00000460211 ZFYVE28Q9HCC9 887 aa17.99■□□□□ 0.47
ATG4B-213ENST00000460211 ZCCHC17Q9NP64 241 aaKnown RBP17.99■□□□□ 0.47
ATG4B-213ENST00000460211 MCM9Q9NXL9 1143 aa17.99■□□□□ 0.47
ATG4B-213ENST00000460211 DOCK2Q92608 1830 aa17.99■□□□□ 0.47
ATG4B-213ENST00000460211 RNF113AO15541 343 aaKnown RBP17.98■□□□□ 0.47
ATG4B-213ENST00000460211 SLURP2P0DP57 97 aa17.98■□□□□ 0.47
ATG4B-213ENST00000460211 CAP2P40123 477 aa17.98■□□□□ 0.47
ATG4B-213ENST00000460211 AMOTL1Q8IY63 956 aa17.98■□□□□ 0.47
ATG4B-213ENST00000460211 FAM43AQ8N2R8 423 aa17.98■□□□□ 0.47
ATG4B-213ENST00000460211 LCORLQ8N3X6 602 aa17.98■□□□□ 0.47
ATG4B-213ENST00000460211 EHD4Q9H223 541 aa17.98■□□□□ 0.47
ATG4B-213ENST00000460211 ATP8A2Q9NTI2 1148 aa17.98■□□□□ 0.47
ATG4B-213ENST00000460211 GINM1Q9NU53 330 aa17.98■□□□□ 0.47
ATG4B-213ENST00000460211 STAP2Q9UGK3 403 aa17.98■□□□□ 0.47
ATG4B-213ENST00000460211 SERPINB13Q9UIV8 391 aa17.98■□□□□ 0.47
ATG4B-213ENST00000460211 ECM2O94769 699 aaPredicted RBP17.97■□□□□ 0.47
ATG4B-213ENST00000460211 ASNSP08243 561 aa17.97■□□□□ 0.47
ATG4B-213ENST00000460211 PDE1AP54750 535 aa17.97■□□□□ 0.47
ATG4B-213ENST00000460211 SLC4A8Q2Y0W8 1093 aa17.97■□□□□ 0.47
ATG4B-213ENST00000460211 FASTKD5Q7L8L6 764 aaKnown RBP17.97■□□□□ 0.47
ATG4B-213ENST00000460211 CHD1LQ86WJ1 897 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms