RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 RASGRP2Q7LDG7 609 aa15.61■□□□□ 0.09
PTPRE-204ENST00000455661 CPLX3Q8WVH0 158 aa15.61■□□□□ 0.09
PTPRE-204ENST00000455661 PHKBQ93100 1093 aa15.61■□□□□ 0.09
PTPRE-204ENST00000455661 CEP126Q9P2H0 1117 aa15.61■□□□□ 0.09
PTPRE-204ENST00000455661 SERTAD1Q9UHV2 236 aa15.61■□□□□ 0.09
PTPRE-204ENST00000455661 ADAMTS7Q9UKP4 1686 aa15.61■□□□□ 0.09
PTPRE-204ENST00000455661 FILIP1LQ4L180 1135 aa15.61■□□□□ 0.09
PTPRE-204ENST00000455661 LRRC24Q50LG9 513 aa15.61■□□□□ 0.09
PTPRE-204ENST00000455661 NAPGQ99747 312 aaPredicted RBP15.61■□□□□ 0.09
PTPRE-204ENST00000455661 TEX13AQ9BXU3 409 aaPredicted RBP15.61■□□□□ 0.09
PTPRE-204ENST00000455661 CIAO1O76071 339 aa15.6■□□□□ 0.09
PTPRE-204ENST00000455661 GTF2A1P52655 376 aaPredicted RBP15.6■□□□□ 0.09
PTPRE-204ENST00000455661 SAFBQ15424 915 aaKnown RBP eCLIP15.6■□□□□ 0.09
PTPRE-204ENST00000455661 ZNF827Q17R98 1081 aa15.6■□□□□ 0.09
PTPRE-204ENST00000455661 CT47A1Q5JQC4 288 aaPredicted RBP15.6■□□□□ 0.09
PTPRE-204ENST00000455661 CTAGE1Q96RT6 745 aa15.6■□□□□ 0.09
PTPRE-204ENST00000455661 SH2B2O14492 632 aaPredicted RBP15.6■□□□□ 0.09
PTPRE-204ENST00000455661 PRR29P0C7W0 189 aa15.6■□□□□ 0.09
PTPRE-204ENST00000455661 VSNL1P62760 191 aa15.6■□□□□ 0.09
PTPRE-204ENST00000455661 ICE2Q659A1 982 aa15.6■□□□□ 0.09
PTPRE-204ENST00000455661 NFXL1Q6ZNB6 911 aa15.6■□□□□ 0.09
PTPRE-204ENST00000455661 CNGA4Q8IV77 575 aa15.6■□□□□ 0.09
PTPRE-204ENST00000455661 THEMISQ8N1K5 641 aaPredicted RBP15.6■□□□□ 0.09
PTPRE-204ENST00000455661 SLC35F6Q8N357 371 aa15.6■□□□□ 0.09
PTPRE-204ENST00000455661 PPM1EQ8WY54 764 aa15.6■□□□□ 0.09
PTPRE-204ENST00000455661 RAPGEF4Q8WZA2 1011 aa15.6■□□□□ 0.09
PTPRE-204ENST00000455661 WASF1Q92558 559 aa15.6■□□□□ 0.09
PTPRE-204ENST00000455661 CCDC51Q96ER9 411 aa15.6■□□□□ 0.09
PTPRE-204ENST00000455661 SUGCTQ9HAC7 445 aa15.6■□□□□ 0.09
PTPRE-204ENST00000455661 CWC25Q9NXE8 425 aaPredicted RBP15.6■□□□□ 0.09
PTPRE-204ENST00000455661 TMEM94Q12767 1356 aa15.6■□□□□ 0.09
PTPRE-204ENST00000455661 EIF3CLB5ME19 914 aaKnown RBP15.59■□□□□ 0.09
PTPRE-204ENST00000455661 TEX33O43247 280 aa15.59■□□□□ 0.09
PTPRE-204ENST00000455661 GPAA1O43292 621 aa15.59■□□□□ 0.09
PTPRE-204ENST00000455661 ZBTB43O43298 467 aa15.59■□□□□ 0.09
PTPRE-204ENST00000455661 RXRAP19793 462 aa15.59■□□□□ 0.09
PTPRE-204ENST00000455661 SSRP1Q08945 709 aaKnown RBP15.59■□□□□ 0.09
PTPRE-204ENST00000455661 ESCO1Q5FWF5 840 aa15.59■□□□□ 0.09
PTPRE-204ENST00000455661 SLC9C2Q5TAH2 1124 aa15.59■□□□□ 0.09
PTPRE-204ENST00000455661 WWC2Q6AWC2 1192 aa15.59■□□□□ 0.09
PTPRE-204ENST00000455661 APOA5Q6Q788 366 aa15.59■□□□□ 0.09
PTPRE-204ENST00000455661 PPP4R3CPQ6ZMV5 832 aa15.59■□□□□ 0.09
PTPRE-204ENST00000455661 MICU3Q86XE3 530 aa15.59■□□□□ 0.09
PTPRE-204ENST00000455661 NOSTRINQ8IVI9 506 aa15.59■□□□□ 0.09
PTPRE-204ENST00000455661 EIF3CQ99613 913 aaKnown RBP15.59■□□□□ 0.09
PTPRE-204ENST00000455661 PUS7LQ9H0K6 701 aaKnown RBP15.59■□□□□ 0.09
PTPRE-204ENST00000455661 MYO1AQ9UBC5 1043 aa15.59■□□□□ 0.09
PTPRE-204ENST00000455661 AKAP2Q9Y2D5 859 aa15.59■□□□□ 0.09
PTPRE-204ENST00000455661 ARFGEF2Q9Y6D5 1785 aa15.59■□□□□ 0.09
PTPRE-204ENST00000455661 PTPREP23469 700 aa15.59■□□□□ 0.09
PTPRE-204ENST00000455661 CEBPAP49715 358 aaPredicted RBP15.59■□□□□ 0.09
PTPRE-204ENST00000455661 SPATA1Q5VX52 437 aa15.59■□□□□ 0.09
PTPRE-204ENST00000455661 STK11IPQ8N1F8 1099 aa15.59■□□□□ 0.09
PTPRE-204ENST00000455661 ZNF594Q96JF6 807 aaPredicted RBP15.59■□□□□ 0.09
PTPRE-204ENST00000455661 DDX60Q8IY21 1712 aaKnown RBP15.58■□□□□ 0.08
PTPRE-204ENST00000455661 GOLGA8AA7E2F4 631 aa15.58■□□□□ 0.08
PTPRE-204ENST00000455661 MFAP3LO75121 409 aa15.58■□□□□ 0.08
PTPRE-204ENST00000455661 PHACTR2O75167 634 aa15.58■□□□□ 0.08
PTPRE-204ENST00000455661 ZNF579Q8NAF0 562 aaKnown RBP15.58■□□□□ 0.08
PTPRE-204ENST00000455661 CTCFLQ8NI51 663 aaPredicted RBP15.58■□□□□ 0.08
PTPRE-204ENST00000455661 TMEM87BQ96K49 555 aa15.58■□□□□ 0.08
PTPRE-204ENST00000455661 YY1AP1Q9H869 796 aa15.58■□□□□ 0.08
PTPRE-204ENST00000455661 FBXO2Q9UK22 296 aaPredicted RBP15.58■□□□□ 0.08
PTPRE-204ENST00000455661 WWC3Q9ULE0 1092 aa15.58■□□□□ 0.08
PTPRE-204ENST00000455661 HSP90AB3PQ58FF7 597 aa15.57■□□□□ 0.08
PTPRE-204ENST00000455661 FOXR1Q6PIV2 292 aa15.57■□□□□ 0.08
PTPRE-204ENST00000455661 LRRC31Q6UY01 552 aa15.57■□□□□ 0.08
PTPRE-204ENST00000455661 CYB5R4Q7L1T6 521 aa15.57■□□□□ 0.08
PTPRE-204ENST00000455661 TMTC1Q8IUR5 882 aa15.57■□□□□ 0.08
PTPRE-204ENST00000455661 CCDC148Q8NFR7 591 aa15.57■□□□□ 0.08
PTPRE-204ENST00000455661 SLC26A6Q9BXS9 759 aa15.57■□□□□ 0.08
PTPRE-204ENST00000455661 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.57■□□□□ 0.08
PTPRE-204ENST00000455661 FAM204AQ9H8W3 233 aa15.57■□□□□ 0.08
PTPRE-204ENST00000455661 CEP131Q9UPN4 1083 aa15.57■□□□□ 0.08
PTPRE-204ENST00000455661 MCM3P25205 808 aa15.57■□□□□ 0.08
PTPRE-204ENST00000455661 CORO7P57737 925 aa15.57■□□□□ 0.08
PTPRE-204ENST00000455661 RILPL1Q5EBL4 403 aa15.57■□□□□ 0.08
PTPRE-204ENST00000455661 WDR93Q6P2C0 686 aa15.57■□□□□ 0.08
PTPRE-204ENST00000455661 MED15Q96RN5 788 aa15.57■□□□□ 0.08
PTPRE-204ENST00000455661 VIPAS39Q9H9C1 493 aa15.57■□□□□ 0.08
PTPRE-204ENST00000455661 BRMS1Q9HCU9 246 aa15.57■□□□□ 0.08
PTPRE-204ENST00000455661 A0A0U1RQJ8 604 aa15.56■□□□□ 0.08
PTPRE-204ENST00000455661 CASP14P31944 242 aa15.56■□□□□ 0.08
PTPRE-204ENST00000455661 NTRK3Q16288 839 aa15.56■□□□□ 0.08
PTPRE-204ENST00000455661 GRAMD1CQ8IYS0 662 aa15.56■□□□□ 0.08
PTPRE-204ENST00000455661 ATRIPQ8WXE1 791 aa15.56■□□□□ 0.08
PTPRE-204ENST00000455661 ZBTB9Q96C00 473 aa15.56■□□□□ 0.08
PTPRE-204ENST00000455661 XAGE2Q96GT9 111 aa15.56■□□□□ 0.08
PTPRE-204ENST00000455661 CDC5LQ99459 802 aaKnown RBP15.56■□□□□ 0.08
PTPRE-204ENST00000455661 ADD3Q9UEY8 706 aaKnown RBP15.56■□□□□ 0.08
PTPRE-204ENST00000455661 UBN2Q6ZU65 1347 aa15.56■□□□□ 0.08
PTPRE-204ENST00000455661 STK36Q9NRP7 1315 aa15.56■□□□□ 0.08
PTPRE-204ENST00000455661 SYNRGQ9UMZ2 1314 aa15.56■□□□□ 0.08
PTPRE-204ENST00000455661 KDM6AO15550 1401 aaPredicted RBP15.56■□□□□ 0.08
PTPRE-204ENST00000455661 SEMA3EO15041 775 aa15.56■□□□□ 0.08
PTPRE-204ENST00000455661 PHKG2P15735 406 aa15.56■□□□□ 0.08
PTPRE-204ENST00000455661 PBX1P40424 430 aa15.56■□□□□ 0.08
PTPRE-204ENST00000455661 ZAP70P43403 619 aa15.56■□□□□ 0.08
PTPRE-204ENST00000455661 MAP9Q49MG5 647 aa15.56■□□□□ 0.08
PTPRE-204ENST00000455661 AFAP1L1Q8TED9 768 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms