RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 AATFQ9NY61 560 aaKnown RBP eCLIP18.99■□□□□ 0.63
HMGB2-203ENST00000446922 HOXD10P28358 340 aa18.98■□□□□ 0.63
HMGB2-203ENST00000446922 CAP2P40123 477 aa18.98■□□□□ 0.63
HMGB2-203ENST00000446922 MAP3K12Q12852 859 aa18.98■□□□□ 0.63
HMGB2-203ENST00000446922 TTF1Q15361 905 aaPredicted RBP18.98■□□□□ 0.63
HMGB2-203ENST00000446922 AACSQ86V21 672 aa18.98■□□□□ 0.63
HMGB2-203ENST00000446922 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.98■□□□□ 0.634e-39■□□□□ 10.3
HMGB2-203ENST00000446922 PIH1D3Q9NQM4 214 aaKnown RBP18.98■□□□□ 0.63
HMGB2-203ENST00000446922 TLR7Q9NYK1 1049 aaKnown RBP18.98■□□□□ 0.63
HMGB2-203ENST00000446922 COG6Q9Y2V7 657 aa18.98■□□□□ 0.63
HMGB2-203ENST00000446922 MAST2Q6P0Q8 1798 aa18.98■□□□□ 0.63
HMGB2-203ENST00000446922 ADGRA2Q96PE1 1338 aa18.98■□□□□ 0.63
HMGB2-203ENST00000446922 CAP1Q01518 475 aa18.97■□□□□ 0.63
HMGB2-203ENST00000446922 PROCA1Q8NCQ7 364 aaPredicted RBP18.97■□□□□ 0.63
HMGB2-203ENST00000446922 CYP7A1P22680 504 aa18.96■□□□□ 0.63
HMGB2-203ENST00000446922 TGFBRAP1Q8WUH2 860 aa18.96■□□□□ 0.63
HMGB2-203ENST00000446922 DOCK1Q14185 1865 aa18.96■□□□□ 0.63
HMGB2-203ENST00000446922 USP17L5A8MUK1 530 aa18.95■□□□□ 0.62
HMGB2-203ENST00000446922 IDH1O75874 414 aaKnown RBP18.95■□□□□ 0.62
HMGB2-203ENST00000446922 BCRP11274 1271 aa18.95■□□□□ 0.62
HMGB2-203ENST00000446922 SLC9C1Q4G0N8 1177 aa18.95■□□□□ 0.62
HMGB2-203ENST00000446922 ADGRA1Q86SQ6 560 aa18.95■□□□□ 0.62
HMGB2-203ENST00000446922 SIRT2Q8IXJ6 389 aa18.95■□□□□ 0.62
HMGB2-203ENST00000446922 ZNF280CQ8ND82 737 aa18.95■□□□□ 0.62
HMGB2-203ENST00000446922 AS3MTQ9HBK9 375 aa18.95■□□□□ 0.62
HMGB2-203ENST00000446922 CPA4Q9UI42 421 aa18.95■□□□□ 0.62
HMGB2-203ENST00000446922 FLT1P17948 1338 aa18.95■□□□□ 0.62
HMGB2-203ENST00000446922 HLA-DOAP06340 250 aa18.94■□□□□ 0.62
HMGB2-203ENST00000446922 ASNSP08243 561 aa18.94■□□□□ 0.62
HMGB2-203ENST00000446922 PSMC4P43686 418 aa18.94■□□□□ 0.62
HMGB2-203ENST00000446922 GADL1Q6ZQY3 521 aa18.94■□□□□ 0.62
HMGB2-203ENST00000446922 ZNF333Q96JL9 665 aa18.94■□□□□ 0.62
HMGB2-203ENST00000446922 WDR18Q9BV38 432 aa18.94■□□□□ 0.62
HMGB2-203ENST00000446922 TMEM106CQ9BVX2 250 aa18.94■□□□□ 0.62
HMGB2-203ENST00000446922 PNMA3Q9UL41 463 aa18.94■□□□□ 0.62
HMGB2-203ENST00000446922 AGTPBP1Q9UPW5 1226 aa18.94■□□□□ 0.62
HMGB2-203ENST00000446922 PTCH2Q9Y6C5 1203 aa18.94■□□□□ 0.62
HMGB2-203ENST00000446922 IFIT2P09913 472 aaKnown RBP18.93■□□□□ 0.62
HMGB2-203ENST00000446922 PABPC4Q13310 644 aaKnown RBP eCLIP18.93■□□□□ 0.623e-50■■□□□ 14.2
HMGB2-203ENST00000446922 SH3D19Q5HYK7 790 aa18.93■□□□□ 0.62
HMGB2-203ENST00000446922 MAPKAPK5Q8IW41 473 aa18.93■□□□□ 0.62
HMGB2-203ENST00000446922 IL1RAPL2Q9NP60 686 aa18.93■□□□□ 0.62
HMGB2-203ENST00000446922 SRRDQ9UH36 339 aa18.93■□□□□ 0.62
HMGB2-203ENST00000446922 PHIPQ8WWQ0 1821 aa18.93■□□□□ 0.62
HMGB2-203ENST00000446922 CENPFP49454 3210 aa18.93■□□□□ 0.62
HMGB2-203ENST00000446922 TRIM75PA6NK02 468 aa18.92■□□□□ 0.62
HMGB2-203ENST00000446922 SLURP2P0DP57 97 aa18.92■□□□□ 0.62
HMGB2-203ENST00000446922 SPP2Q13103 211 aa18.92■□□□□ 0.62
HMGB2-203ENST00000446922 MAGEB6Q8N7X4 407 aa18.92■□□□□ 0.62
HMGB2-203ENST00000446922 TRIM34Q9BYJ4 488 aa18.92■□□□□ 0.62
HMGB2-203ENST00000446922 FOCADQ5VW36 1801 aa18.91■□□□□ 0.62
HMGB2-203ENST00000446922 FAM196BA6NMK8 535 aa18.91■□□□□ 0.62
HMGB2-203ENST00000446922 FMNL1O95466 1100 aaPredicted RBP18.91■□□□□ 0.62
HMGB2-203ENST00000446922 CYP2C8P10632 490 aa18.91■□□□□ 0.62
HMGB2-203ENST00000446922 CRACR2BQ8N4Y2 399 aaPredicted RBP18.91■□□□□ 0.62
HMGB2-203ENST00000446922 TRIM47Q96LD4 638 aa18.91■□□□□ 0.62
HMGB2-203ENST00000446922 ARHGAP39Q9C0H5 1083 aa18.91■□□□□ 0.62
HMGB2-203ENST00000446922 ANTXR1Q9H6X2 564 aa18.91■□□□□ 0.62
HMGB2-203ENST00000446922 TAOK2Q9UL54 1235 aa18.91■□□□□ 0.62
HMGB2-203ENST00000446922 PALD1Q9ULE6 856 aa18.91■□□□□ 0.62
HMGB2-203ENST00000446922 RBBP6Q7Z6E9 1792 aaKnown RBP18.91■□□□□ 0.62
HMGB2-203ENST00000446922 C19orf81C9J6K1 198 aa18.9■□□□□ 0.62
HMGB2-203ENST00000446922 FCGRTP55899 365 aa18.9■□□□□ 0.62
HMGB2-203ENST00000446922 DYNLL1P63167 89 aaKnown RBP18.9■□□□□ 0.62
HMGB2-203ENST00000446922 TTC6Q86TZ1 520 aa18.9■□□□□ 0.62
HMGB2-203ENST00000446922 EHD4Q9H223 541 aa18.9■□□□□ 0.62
HMGB2-203ENST00000446922 MYO5AQ9Y4I1 1855 aaKnown RBP18.9■□□□□ 0.62
HMGB2-203ENST00000446922 PTPRFP10586 1907 aa18.9■□□□□ 0.62
HMGB2-203ENST00000446922 ATP5JP18859 108 aa18.89■□□□□ 0.61
HMGB2-203ENST00000446922 OSBPP22059 807 aa18.89■□□□□ 0.61
HMGB2-203ENST00000446922 USP5P45974 858 aa18.89■□□□□ 0.61
HMGB2-203ENST00000446922 GCLCP48506 637 aaPredicted RBP18.89■□□□□ 0.61
HMGB2-203ENST00000446922 RRP1BQ14684 758 aaKnown RBP18.89■□□□□ 0.61
HMGB2-203ENST00000446922 SMCR8Q8TEV9 937 aaPredicted RBP18.89■□□□□ 0.61
HMGB2-203ENST00000446922 CDK5RAP2Q96SN8 1893 aa18.88■□□□□ 0.61
HMGB2-203ENST00000446922 POTEFA5A3E0 1075 aa18.88■□□□□ 0.61
HMGB2-203ENST00000446922 CAPN2P17655 700 aa18.88■□□□□ 0.61
HMGB2-203ENST00000446922 CTGFP29279 349 aa18.88■□□□□ 0.61
HMGB2-203ENST00000446922 BACE1P56817 501 aa18.88■□□□□ 0.61
HMGB2-203ENST00000446922 SLC9C2Q5TAH2 1124 aa18.88■□□□□ 0.61
HMGB2-203ENST00000446922 TATDN1Q6P1N9 297 aa18.88■□□□□ 0.61
HMGB2-203ENST00000446922 MIGA1Q8NAN2 632 aa18.88■□□□□ 0.61
HMGB2-203ENST00000446922 RAET1EQ8TD07 263 aa18.88■□□□□ 0.61
HMGB2-203ENST00000446922 RIOK1Q9BRS2 568 aaKnown RBP18.88■□□□□ 0.61
HMGB2-203ENST00000446922 DNAJC18Q9H819 358 aa18.88■□□□□ 0.61
HMGB2-203ENST00000446922 MAGEB6P1A0A0J9YX57 407 aa18.87■□□□□ 0.61
HMGB2-203ENST00000446922 USP17L10C9JJH3 530 aa18.87■□□□□ 0.61
HMGB2-203ENST00000446922 HOXA7P31268 230 aaPredicted RBP18.87■□□□□ 0.61
HMGB2-203ENST00000446922 FAM110CQ1W6H9 321 aa18.87■□□□□ 0.61
HMGB2-203ENST00000446922 PRPF38BQ5VTL8 546 aaKnown RBP18.87■□□□□ 0.61
HMGB2-203ENST00000446922 LRRCC1Q9C099 1032 aa18.87■□□□□ 0.61
HMGB2-203ENST00000446922 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.87■□□□□ 0.61
HMGB2-203ENST00000446922 SERPINB13Q9UIV8 391 aa18.87■□□□□ 0.61
HMGB2-203ENST00000446922 NDUFB9Q9Y6M9 179 aa18.87■□□□□ 0.61
HMGB2-203ENST00000446922 SIPA1L1O43166 1804 aa18.86■□□□□ 0.61
HMGB2-203ENST00000446922 ATAD5Q96QE3 1844 aa18.86■□□□□ 0.61
HMGB2-203ENST00000446922 MYPNQ86TC9 1320 aa18.86■□□□□ 0.61
HMGB2-203ENST00000446922 APBB1O00213 710 aa18.86■□□□□ 0.61
HMGB2-203ENST00000446922 PDE6AP16499 860 aa18.86■□□□□ 0.61
HMGB2-203ENST00000446922 GRK4P32298 578 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms