RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CTNND2Q9UQB3 1225 aa18.8■□□□□ 0.6
TCOF1-206ENST00000445265 PLCD1P51178 756 aa18.8■□□□□ 0.6
TCOF1-206ENST00000445265 KRBA2Q6ZNG9 492 aa18.8■□□□□ 0.6
TCOF1-206ENST00000445265 TMTC1Q8IUR5 882 aa18.8■□□□□ 0.6
TCOF1-206ENST00000445265 IFNL3Q8IZI9 196 aa18.8■□□□□ 0.6
TCOF1-206ENST00000445265 DDX17Q92841 729 aaKnown RBP18.8■□□□□ 0.6
TCOF1-206ENST00000445265 SERTAD1Q9UHV2 236 aa18.8■□□□□ 0.6
TCOF1-206ENST00000445265 FRMPD1Q5SYB0 1578 aa18.8■□□□□ 0.6
TCOF1-206ENST00000445265 MATR3P43243 847 aaKnown RBP eCLIP18.8■□□□□ 0.6
TCOF1-206ENST00000445265 HDXQ7Z353 690 aa18.8■□□□□ 0.6
TCOF1-206ENST00000445265 ALDH8A1Q9H2A2 487 aaPredicted RBP18.8■□□□□ 0.6
TCOF1-206ENST00000445265 BTG4Q9NY30 223 aa18.8■□□□□ 0.6
TCOF1-206ENST00000445265 ZNF654Q8IZM8 581 aa18.79■□□□□ 0.6
TCOF1-206ENST00000445265 PXDNLA1KZ92 1463 aa18.79■□□□□ 0.6
TCOF1-206ENST00000445265 RFX7Q2KHR2 1363 aa18.79■□□□□ 0.6
TCOF1-206ENST00000445265 MED23Q9ULK4 1368 aa18.79■□□□□ 0.6
TCOF1-206ENST00000445265 CHMP4BP1P59074 171 aa18.79■□□□□ 0.6
TCOF1-206ENST00000445265 CYP26C1Q6V0L0 522 aa18.79■□□□□ 0.6
TCOF1-206ENST00000445265 NAPGQ99747 312 aaPredicted RBP18.79■□□□□ 0.6
TCOF1-206ENST00000445265 TPTE2Q6XPS3 522 aa18.79■□□□□ 0.6
TCOF1-206ENST00000445265 VPS16Q9H269 839 aa18.79■□□□□ 0.6
TCOF1-206ENST00000445265 PPLO60437 1756 aa18.79■□□□□ 0.6
TCOF1-206ENST00000445265 PTPRUQ92729 1446 aa18.79■□□□□ 0.6
TCOF1-206ENST00000445265 IKBKBO14920 756 aa18.79■□□□□ 0.6
TCOF1-206ENST00000445265 PPP6R2O75170 966 aa18.79■□□□□ 0.6
TCOF1-206ENST00000445265 PAK1Q13153 545 aa18.79■□□□□ 0.6
TCOF1-206ENST00000445265 CUL5Q93034 780 aa18.79■□□□□ 0.6
TCOF1-206ENST00000445265 RRP36Q96EU6 259 aaKnown RBP18.79■□□□□ 0.6
TCOF1-206ENST00000445265 MMRN2Q9H8L6 949 aa18.79■□□□□ 0.6
TCOF1-206ENST00000445265 MROH2AA6NES4 1674 aa18.78■□□□□ 0.6
TCOF1-206ENST00000445265 RHOXF2BP0C7M4 288 aa18.78■□□□□ 0.6
TCOF1-206ENST00000445265 ADORA1P30542 326 aa18.78■□□□□ 0.6
TCOF1-206ENST00000445265 IFI16Q16666 785 aaKnown RBP18.78■□□□□ 0.6
TCOF1-206ENST00000445265 PIK3AP1Q6ZUJ8 805 aa18.78■□□□□ 0.6
TCOF1-206ENST00000445265 RHOXF2Q9BQY4 288 aa18.78■□□□□ 0.6
TCOF1-206ENST00000445265 ADGRB2O60241 1585 aa18.78■□□□□ 0.6
TCOF1-206ENST00000445265 HLTFQ14527 1009 aaKnown RBP eCLIP18.78■□□□□ 0.6
TCOF1-206ENST00000445265 FTOQ9C0B1 505 aaKnown RBP eCLIP18.78■□□□□ 0.62e-6■□□□□ 9.3
TCOF1-206ENST00000445265 TMOD2Q9NZR1 351 aa18.78■□□□□ 0.6
TCOF1-206ENST00000445265 HLA-DOAP06340 250 aa18.78■□□□□ 0.6
TCOF1-206ENST00000445265 TCERG1LQ5VWI1 586 aa18.78■□□□□ 0.6
TCOF1-206ENST00000445265 KRT79Q5XKE5 535 aa18.78■□□□□ 0.6
TCOF1-206ENST00000445265 PLCG2P16885 1265 aa18.77■□□□□ 0.6
TCOF1-206ENST00000445265 CCDC122Q5T0U0 273 aa18.77■□□□□ 0.6
TCOF1-206ENST00000445265 PRDM1O75626 825 aa18.77■□□□□ 0.6
TCOF1-206ENST00000445265 DPCR1Q3MIW9 517 aa18.77■□□□□ 0.6
TCOF1-206ENST00000445265 EPHA10Q5JZY3 1008 aa18.77■□□□□ 0.6
TCOF1-206ENST00000445265 APOA5Q6Q788 366 aa18.77■□□□□ 0.6
TCOF1-206ENST00000445265 ZNF804AQ7Z570 1209 aa18.77■□□□□ 0.6
TCOF1-206ENST00000445265 TRMT44Q8IYL2 757 aaKnown RBP18.77■□□□□ 0.6
TCOF1-206ENST00000445265 M0R2C6 588 aa18.77■□□□□ 0.6
TCOF1-206ENST00000445265 RFC4P35249 363 aa18.77■□□□□ 0.6
TCOF1-206ENST00000445265 OSBP2Q969R2 916 aa18.77■□□□□ 0.6
TCOF1-206ENST00000445265 PDE8BO95263 885 aa18.77■□□□□ 0.59
TCOF1-206ENST00000445265 LDHBP07195 334 aaKnown RBP18.77■□□□□ 0.59
TCOF1-206ENST00000445265 CAPN2P17655 700 aa18.77■□□□□ 0.59
TCOF1-206ENST00000445265 NOP2P46087 812 aaKnown RBP18.76■□□□□ 0.59
TCOF1-206ENST00000445265 KIF23Q02241 960 aaPredicted RBP18.76■□□□□ 0.59
TCOF1-206ENST00000445265 TSGA10IPQ3SY00 556 aa18.76■□□□□ 0.59
TCOF1-206ENST00000445265 FANCBQ8NB91 859 aa18.76■□□□□ 0.59
TCOF1-206ENST00000445265 SPAG5Q96R06 1193 aa18.76■□□□□ 0.59
TCOF1-206ENST00000445265 FANCLQ9NW38 375 aa18.76■□□□□ 0.59
TCOF1-206ENST00000445265 H7C1W4 665 aa18.76■□□□□ 0.59
TCOF1-206ENST00000445265 HSF2BPO75031 334 aa18.76■□□□□ 0.59
TCOF1-206ENST00000445265 PPARAQ07869 468 aa18.76■□□□□ 0.59
TCOF1-206ENST00000445265 SARM1Q6SZW1 724 aa18.76■□□□□ 0.59
TCOF1-206ENST00000445265 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.76■□□□□ 0.59
TCOF1-206ENST00000445265 CDCA7Q9BWT1 371 aaPredicted RBP18.76■□□□□ 0.59
TCOF1-206ENST00000445265 BTBD18B2RXH4 712 aa18.76■□□□□ 0.59
TCOF1-206ENST00000445265 MICALCLQ6ZW33 695 aa18.76■□□□□ 0.59
TCOF1-206ENST00000445265 CCDC51Q96ER9 411 aa18.76■□□□□ 0.59
TCOF1-206ENST00000445265 TMCO5BA8MYB1 307 aa18.76■□□□□ 0.59
TCOF1-206ENST00000445265 ERCC6LQ2NKX8 1250 aa18.76■□□□□ 0.59
TCOF1-206ENST00000445265 ERMNQ8TAM6 284 aa18.76■□□□□ 0.59
TCOF1-206ENST00000445265 MAP3K15Q6ZN16 1313 aa18.76■□□□□ 0.59
TCOF1-206ENST00000445265 TBC1D8BQ0IIM8 1120 aa18.75■□□□□ 0.59
TCOF1-206ENST00000445265 FCHSD1Q86WN1 690 aa18.75■□□□□ 0.59
TCOF1-206ENST00000445265 DRC1Q96MC2 740 aa18.75■□□□□ 0.59
TCOF1-206ENST00000445265 VPS54Q9P1Q0 977 aa18.75■□□□□ 0.59
TCOF1-206ENST00000445265 WDHD1O75717 1129 aaPredicted RBP18.75■□□□□ 0.59
TCOF1-206ENST00000445265 CCDC87Q9NVE4 849 aa18.75■□□□□ 0.59
TCOF1-206ENST00000445265 VPS18Q9P253 973 aa18.75■□□□□ 0.59
TCOF1-206ENST00000445265 PCDHA5Q9Y5H7 936 aa18.75■□□□□ 0.59
TCOF1-206ENST00000445265 MYOM1P52179 1685 aa18.75■□□□□ 0.59
TCOF1-206ENST00000445265 RPAP1Q9BWH6 1393 aaPredicted RBP18.75■□□□□ 0.59
TCOF1-206ENST00000445265 HEG1Q9ULI3 1381 aa18.75■□□□□ 0.59
TCOF1-206ENST00000445265 KRT9P35527 623 aa18.75■□□□□ 0.59
TCOF1-206ENST00000445265 GIGYF2Q6Y7W6 1299 aaKnown RBP18.75■□□□□ 0.59
TCOF1-206ENST00000445265 TNIP1Q15025 636 aa18.75■□□□□ 0.59
TCOF1-206ENST00000445265 HIBADHP31937 336 aaKnown RBP18.74■□□□□ 0.59
TCOF1-206ENST00000445265 NGLY1Q96IV0 654 aa18.74■□□□□ 0.59
TCOF1-206ENST00000445265 PGBD1Q96JS3 809 aa18.74■□□□□ 0.59
TCOF1-206ENST00000445265 CLIC6Q96NY7 704 aa18.74■□□□□ 0.59
TCOF1-206ENST00000445265 STXBP4Q6ZWJ1 553 aa18.74■□□□□ 0.59
TCOF1-206ENST00000445265 GPR161Q8N6U8 529 aaKnown RBP18.74■□□□□ 0.59
TCOF1-206ENST00000445265 TSGA10Q9BZW7 698 aa18.74■□□□□ 0.59
TCOF1-206ENST00000445265 OPA1O60313 960 aa18.74■□□□□ 0.59
TCOF1-206ENST00000445265 ADKP55263 362 aaKnown RBP18.74■□□□□ 0.59
TCOF1-206ENST00000445265 PPP2R2CQ9Y2T4 447 aa18.74■□□□□ 0.59
TCOF1-206ENST00000445265 IFFO1Q0D2I5 559 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms