RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 TCRBV5S4A2TA0A5A2 114 aa14.72□□□□□ -0.05
LTBR-204ENST00000444814 FAM155AB1AL88 458 aaPredicted RBP14.72□□□□□ -0.05
LTBR-204ENST00000444814 HIP1O00291 1037 aa14.72□□□□□ -0.05
LTBR-204ENST00000444814 CTNND1O60716 968 aaKnown RBP14.72□□□□□ -0.05
LTBR-204ENST00000444814 AOC2O75106 756 aa14.72□□□□□ -0.05
LTBR-204ENST00000444814 MBD4O95243 580 aa14.72□□□□□ -0.05
LTBR-204ENST00000444814 GTF2A2P52657 109 aa14.72□□□□□ -0.05
LTBR-204ENST00000444814 VGLL4Q14135 290 aa14.72□□□□□ -0.05
LTBR-204ENST00000444814 NOL9Q5SY16 702 aaKnown RBP14.72□□□□□ -0.05
LTBR-204ENST00000444814 WNK4Q96J92 1243 aa14.72□□□□□ -0.05
LTBR-204ENST00000444814 RIOK1Q9BRS2 568 aaKnown RBP14.72□□□□□ -0.05
LTBR-204ENST00000444814 NACAP1Q9BZK3 213 aa14.72□□□□□ -0.05
LTBR-204ENST00000444814 ELP3Q9H9T3 547 aa14.72□□□□□ -0.05
LTBR-204ENST00000444814 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.72□□□□□ -0.05
LTBR-204ENST00000444814 ZNF112Q9UJU3 913 aa14.72□□□□□ -0.05
LTBR-204ENST00000444814 SALL3Q9BXA9 1300 aa14.71□□□□□ -0.05
LTBR-204ENST00000444814 DDTLA6NHG4 134 aaPredicted RBP14.71□□□□□ -0.05
LTBR-204ENST00000444814 HSPA1AP0DMV8 641 aaKnown RBP14.71□□□□□ -0.05
LTBR-204ENST00000444814 HSPA1BP0DMV9 641 aaKnown RBP14.71□□□□□ -0.05
LTBR-204ENST00000444814 CTCFP49711 727 aaPredicted RBP14.71□□□□□ -0.05
LTBR-204ENST00000444814 MFAP1P55081 439 aaKnown RBP14.71□□□□□ -0.05
LTBR-204ENST00000444814 MAP3K10Q02779 954 aa14.71□□□□□ -0.05
LTBR-204ENST00000444814 PPATQ06203 517 aa14.71□□□□□ -0.05
LTBR-204ENST00000444814 OTUD7AQ8TE49 926 aaPredicted RBP14.71□□□□□ -0.05
LTBR-204ENST00000444814 OPTNQ96CV9 577 aa14.71□□□□□ -0.05
LTBR-204ENST00000444814 WBP1LQ9NX94 342 aa14.71□□□□□ -0.05
LTBR-204ENST00000444814 SAGE1Q9NXZ1 904 aa14.71□□□□□ -0.05
LTBR-204ENST00000444814 SPDYE5A6NIY4 337 aa14.7□□□□□ -0.06
LTBR-204ENST00000444814 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.7□□□□□ -0.06
LTBR-204ENST00000444814 ZFPM1Q8IX07 1006 aa14.7□□□□□ -0.06
LTBR-204ENST00000444814 SCYL3Q8IZE3 742 aa14.7□□□□□ -0.06
LTBR-204ENST00000444814 CCDC136Q96JN2 1154 aa14.7□□□□□ -0.06
LTBR-204ENST00000444814 EHD4Q9H223 541 aa14.7□□□□□ -0.06
LTBR-204ENST00000444814 MCM9Q9NXL9 1143 aa14.7□□□□□ -0.06
LTBR-204ENST00000444814 SERPINB13Q9UIV8 391 aa14.7□□□□□ -0.06
LTBR-204ENST00000444814 SLC4A4Q9Y6R1 1079 aa14.7□□□□□ -0.06
LTBR-204ENST00000444814 CETPP11597 493 aa14.69□□□□□ -0.06
LTBR-204ENST00000444814 PPIL2Q13356 520 aa14.69□□□□□ -0.06
LTBR-204ENST00000444814 SNAPC2Q13487 334 aa14.69□□□□□ -0.06
LTBR-204ENST00000444814 GIMAP6Q6P9H5 292 aa14.69□□□□□ -0.06
LTBR-204ENST00000444814 PLEKHM2Q8IWE5 1019 aa14.69□□□□□ -0.06
LTBR-204ENST00000444814 CDAN1Q8IWY9 1227 aa14.69□□□□□ -0.06
LTBR-204ENST00000444814 RILPL2Q969X0 211 aa14.69□□□□□ -0.06
LTBR-204ENST00000444814 CLMNQ96JQ2 1002 aa14.69□□□□□ -0.06
LTBR-204ENST00000444814 ARMT1Q9H993 441 aa14.69□□□□□ -0.06
LTBR-204ENST00000444814 AS3MTQ9HBK9 375 aa14.69□□□□□ -0.06
LTBR-204ENST00000444814 ZNF287Q9HBT7 754 aa14.69□□□□□ -0.06
LTBR-204ENST00000444814 PALD1Q9ULE6 856 aa14.69□□□□□ -0.06
LTBR-204ENST00000444814 AK9Q5TCS8 1911 aa14.69□□□□□ -0.06
LTBR-204ENST00000444814 THSD7BQ9C0I4 1608 aa14.69□□□□□ -0.06
LTBR-204ENST00000444814 SH3BP5LQ7L8J4 393 aa14.68□□□□□ -0.06
LTBR-204ENST00000444814 LCORLQ8N3X6 602 aa14.68□□□□□ -0.06
LTBR-204ENST00000444814 OTUD5Q96G74 571 aa14.68□□□□□ -0.06
LTBR-204ENST00000444814 ARPP21Q9UBL0 812 aaPredicted RBP14.68□□□□□ -0.06
LTBR-204ENST00000444814 SWAP70Q9UH65 585 aa14.68□□□□□ -0.06
LTBR-204ENST00000444814 SAP30BPQ9UHR5 308 aaKnown RBP14.68□□□□□ -0.06
LTBR-204ENST00000444814 FZD1Q9UP38 647 aa14.68□□□□□ -0.06
LTBR-204ENST00000444814 APPP05067 770 aa14.68□□□□□ -0.06
LTBR-204ENST00000444814 SLC3A2P08195 630 aaKnown RBP14.68□□□□□ -0.06
LTBR-204ENST00000444814 ASNSP08243 561 aa14.68□□□□□ -0.06
LTBR-204ENST00000444814 TM4SF4P48230 202 aa14.68□□□□□ -0.06
LTBR-204ENST00000444814 MKRN3Q13064 507 aaKnown RBP14.68□□□□□ -0.06
LTBR-204ENST00000444814 ZKSCAN4Q969J2 545 aaPredicted RBP14.68□□□□□ -0.06
LTBR-204ENST00000444814 CABP5Q9NP86 173 aa14.68□□□□□ -0.06
LTBR-204ENST00000444814 DCP1AQ9NPI6 582 aaPredicted RBP14.68□□□□□ -0.06
LTBR-204ENST00000444814 HELLSQ9NRZ9 838 aa14.68□□□□□ -0.06
LTBR-204ENST00000444814 SNCAIPQ9Y6H5 919 aa14.68□□□□□ -0.06
LTBR-204ENST00000444814 GPAA1O43292 621 aa14.67□□□□□ -0.06
LTBR-204ENST00000444814 INPP5BP32019 993 aa14.67□□□□□ -0.06
LTBR-204ENST00000444814 ZMYM1Q5SVZ6 1142 aa14.67□□□□□ -0.06
LTBR-204ENST00000444814 DIAPH3Q9NSV4 1193 aa14.67□□□□□ -0.06
LTBR-204ENST00000444814 PHF20L1A8MW92 1017 aa14.66□□□□□ -0.06
LTBR-204ENST00000444814 CXCL11O14625 94 aa14.66□□□□□ -0.06
LTBR-204ENST00000444814 CAP2P40123 477 aa14.66□□□□□ -0.06
LTBR-204ENST00000444814 TDO2P48775 406 aa14.66□□□□□ -0.06
LTBR-204ENST00000444814 FASTKD5Q7L8L6 764 aaKnown RBP14.66□□□□□ -0.06
LTBR-204ENST00000444814 METTL16Q86W50 562 aaKnown RBP14.66□□□□□ -0.06
LTBR-204ENST00000444814 SDR42E1Q8WUS8 393 aa14.66□□□□□ -0.06
LTBR-204ENST00000444814 STRBPQ96SI9 672 aaKnown RBP14.66□□□□□ -0.06
LTBR-204ENST00000444814 PUS7LQ9H0K6 701 aaKnown RBP14.66□□□□□ -0.06
LTBR-204ENST00000444814 ZCCHC17Q9NP64 241 aaKnown RBP14.66□□□□□ -0.06
LTBR-204ENST00000444814 CCL15-CCL14A0A0B4J2E2 113 aa14.64□□□□□ -0.07
LTBR-204ENST00000444814 USP17L5A8MUK1 530 aa14.64□□□□□ -0.07
LTBR-204ENST00000444814 PATL2C9JE40 543 aaKnown RBP14.64□□□□□ -0.07
LTBR-204ENST00000444814 PTPRAP18433 802 aa14.64□□□□□ -0.07
LTBR-204ENST00000444814 CCL15Q16663 113 aa14.64□□□□□ -0.07
LTBR-204ENST00000444814 CERKLQ49MI3 558 aaPredicted RBP14.64□□□□□ -0.07
LTBR-204ENST00000444814 MCMDC2Q4G0Z9 681 aa14.64□□□□□ -0.07
LTBR-204ENST00000444814 RUFY2Q8WXA3 655 aa14.64□□□□□ -0.07
LTBR-204ENST00000444814 OSBP2Q969R2 916 aa14.64□□□□□ -0.07
LTBR-204ENST00000444814 NAPBQ9H115 298 aa14.64□□□□□ -0.07
LTBR-204ENST00000444814 PRDM10Q9NQV6 1147 aa14.64□□□□□ -0.07
LTBR-204ENST00000444814 ZHX2Q9Y6X8 837 aa14.64□□□□□ -0.07
LTBR-204ENST00000444814 TESPA1A2RU30 521 aaPredicted RBP14.64□□□□□ -0.07
LTBR-204ENST00000444814 PABPC4Q13310 644 aaKnown RBP eCLIP14.64□□□□□ -0.07
LTBR-204ENST00000444814 SBK1Q52WX2 424 aa14.64□□□□□ -0.07
LTBR-204ENST00000444814 TTC22Q5TAA0 569 aa14.64□□□□□ -0.07
LTBR-204ENST00000444814 IFNL1Q8IU54 200 aa14.64□□□□□ -0.07
LTBR-204ENST00000444814 CCDC17Q96LX7 622 aa14.64□□□□□ -0.07
LTBR-204ENST00000444814 RNF186Q9NXI6 227 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms